EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000036701 (Gene tree)
Gene ID: 105580167
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 10909 bases
Position: chrKQ012552.1:1180003-1190911
Accession: 105580167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000026615	RRM_1	PF00076.22	2.5e-13	1	1
ENSCATP00000026615	RRM_3	PF08777.11	2.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000050854	SSB-201	1041	XM_012047907	ENSCATP00000026615	346 (aa)	XP_011903297	A0A2K5MND9

Gene Model

Click here to download ENSCATG00000036701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000036701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000036701	SSB	100	65.867	ENSCATG00000042909	-	100	65.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000036701	SSB	100	76.961	ENSG00000138385	SSB	100	76.961	Homo_sapiens
ENSCATG00000036701	SSB	83	50.859	ENSAPOG00000003448	ssb	71	51.203	Acanthochromis_polyacanthus
ENSCATG00000036701	SSB	100	71.190	ENSAMEG00000010507	SSB	100	71.190	Ailuropoda_melanoleuca
ENSCATG00000036701	SSB	74	55.212	ENSACIG00000001738	ssb	67	55.212	Amphilophus_citrinellus
ENSCATG00000036701	SSB	83	50.515	ENSAOCG00000020398	ssb	71	50.859	Amphiprion_ocellaris
ENSCATG00000036701	SSB	83	51.203	ENSAPEG00000020395	ssb	71	51.546	Amphiprion_percula
ENSCATG00000036701	SSB	83	54.296	ENSATEG00000016884	ssb	83	49.271	Anabas_testudineus
ENSCATG00000036701	SSB	93	62.248	ENSAPLG00000006109	SSB	79	64.080	Anas_platyrhynchos
ENSCATG00000036701	SSB	93	58.559	ENSACAG00000017008	SSB	78	58.559	Anolis_carolinensis
ENSCATG00000036701	SSB	100	68.148	ENSANAG00000027195	-	100	68.395	Aotus_nancymaae
ENSCATG00000036701	SSB	83	50.519	ENSACLG00000010798	ssb	71	50.173	Astatotilapia_calliptera
ENSCATG00000036701	SSB	83	53.535	ENSAMXG00000012606	ssb	72	55.333	Astyanax_mexicanus
ENSCATG00000036701	SSB	100	73.086	ENSBTAG00000008716	SSB	100	73.086	Bos_taurus
ENSCATG00000036701	SSB	100	76.790	ENSCJAG00000045073	SSB	100	76.790	Callithrix_jacchus
ENSCATG00000036701	SSB	100	73.892	ENSCAFG00000012418	SSB	100	73.892	Canis_familiaris
ENSCATG00000036701	SSB	100	73.892	ENSCAFG00020002900	SSB	100	73.892	Canis_lupus_dingo
ENSCATG00000036701	SSB	100	71.852	ENSCHIG00000022624	-	100	71.852	Capra_hircus
ENSCATG00000036701	SSB	100	68.148	ENSCHIG00000022196	-	100	68.148	Capra_hircus
ENSCATG00000036701	SSB	100	74.321	ENSTSYG00000000097	SSB	100	73.333	Carlito_syrichta
ENSCATG00000036701	SSB	100	75.309	ENSCPOG00000003338	SSB	100	75.309	Cavia_porcellus
ENSCATG00000036701	SSB	100	76.296	ENSCCAG00000035147	SSB	100	76.296	Cebus_capucinus
ENSCATG00000036701	SSB	100	74.815	ENSCLAG00000015617	-	100	74.815	Chinchilla_lanigera
ENSCATG00000036701	SSB	100	78.519	ENSCSAG00000015200	SSB	89	78.519	Chlorocebus_sabaeus
ENSCATG00000036701	SSB	98	69.444	ENSCSAG00000018390	-	100	69.444	Chlorocebus_sabaeus
ENSCATG00000036701	SSB	100	73.580	ENSCHOG00000007763	SSB	100	73.580	Choloepus_hoffmanni
ENSCATG00000036701	SSB	84	77.211	ENSCPBG00000006519	SSB	72	78.912	Chrysemys_picta_bellii
ENSCATG00000036701	SSB	98	68.835	ENSCANG00000028838	-	95	68.835	Colobus_angolensis_palliatus
ENSCATG00000036701	SSB	100	77.531	ENSCANG00000027695	SSB	100	77.531	Colobus_angolensis_palliatus
ENSCATG00000036701	SSB	100	68.010	ENSCANG00000033240	-	100	68.010	Colobus_angolensis_palliatus
ENSCATG00000036701	SSB	100	58.537	ENSCGRG00001024831	Ssb	100	60.000	Cricetulus_griseus_chok1gshd
ENSCATG00000036701	SSB	100	58.537	ENSCGRG00000005387	Ssb	100	60.000	Cricetulus_griseus_crigri
ENSCATG00000036701	SSB	83	53.608	ENSCSEG00000011599	ssb	72	53.952	Cynoglossus_semilaevis
ENSCATG00000036701	SSB	83	53.082	ENSCVAG00000021558	ssb	72	53.425	Cyprinodon_variegatus
ENSCATG00000036701	SSB	83	54.110	ENSDARG00000029252	ssb	99	44.169	Danio_rerio
ENSCATG00000036701	SSB	100	73.086	ENSDNOG00000013450	SSB	100	73.086	Dasypus_novemcinctus
ENSCATG00000036701	SSB	100	63.260	ENSDORG00000005543	Ssb	100	63.504	Dipodomys_ordii
ENSCATG00000036701	SSB	82	46.154	ENSEBUG00000001237	ssb	69	46.503	Eptatretus_burgeri
ENSCATG00000036701	SSB	100	75.062	ENSEASG00005022835	SSB	100	75.062	Equus_asinus_asinus
ENSCATG00000036701	SSB	100	75.309	ENSECAG00000018495	SSB	100	75.309	Equus_caballus
ENSCATG00000036701	SSB	79	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSCATG00000036701	SSB	83	56.507	ENSELUG00000020929	ssb	72	56.997	Esox_lucius
ENSCATG00000036701	SSB	100	74.138	ENSFCAG00000011601	SSB	100	74.138	Felis_catus
ENSCATG00000036701	SSB	93	66.667	ENSFALG00000000930	SSB	78	68.072	Ficedula_albicollis
ENSCATG00000036701	SSB	100	74.815	ENSFDAG00000000598	SSB	100	74.815	Fukomys_damarensis
ENSCATG00000036701	SSB	73	50.195	ENSFHEG00000003268	ssb	90	47.020	Fundulus_heteroclitus
ENSCATG00000036701	SSB	83	51.505	ENSGMOG00000002664	ssb	73	52.508	Gadus_morhua
ENSCATG00000036701	SSB	93	67.674	ENSGALG00000009677	SSB	78	67.674	Gallus_gallus
ENSCATG00000036701	SSB	83	51.546	ENSGAFG00000002749	ssb	72	51.890	Gambusia_affinis
ENSCATG00000036701	SSB	83	49.158	ENSGACG00000005107	ssb	72	49.832	Gasterosteus_aculeatus
ENSCATG00000036701	SSB	93	70.482	ENSGAGG00000007807	SSB	78	71.386	Gopherus_agassizii
ENSCATG00000036701	SSB	73	100.000	ENSGGOG00000023471	-	100	100.000	Gorilla_gorilla
ENSCATG00000036701	SSB	100	68.783	ENSGGOG00000024891	-	100	68.783	Gorilla_gorilla
ENSCATG00000036701	SSB	83	49.827	ENSHBUG00000006584	ssb	71	49.481	Haplochromis_burtoni
ENSCATG00000036701	SSB	100	71.642	ENSHGLG00000004478	-	100	71.642	Heterocephalus_glaber_female
ENSCATG00000036701	SSB	100	73.544	ENSHGLG00000017580	-	100	73.544	Heterocephalus_glaber_female
ENSCATG00000036701	SSB	100	66.667	ENSHGLG00000005832	-	100	66.667	Heterocephalus_glaber_female
ENSCATG00000036701	SSB	100	62.469	ENSHGLG00100008767	-	100	62.469	Heterocephalus_glaber_male
ENSCATG00000036701	SSB	100	73.544	ENSHGLG00100003084	-	100	73.544	Heterocephalus_glaber_male
ENSCATG00000036701	SSB	83	52.249	ENSHCOG00000019011	ssb	72	52.595	Hippocampus_comes
ENSCATG00000036701	SSB	83	54.392	ENSIPUG00000003681	SSB	79	51.212	Ictalurus_punctatus
ENSCATG00000036701	SSB	100	73.580	ENSSTOG00000008416	SSB	100	73.580	Ictidomys_tridecemlineatus
ENSCATG00000036701	SSB	100	60.047	ENSJJAG00000023158	-	100	60.047	Jaculus_jaculus
ENSCATG00000036701	SSB	99	57.513	ENSJJAG00000016250	-	99	57.513	Jaculus_jaculus
ENSCATG00000036701	SSB	83	52.234	ENSKMAG00000017317	ssb	72	52.577	Kryptolebias_marmoratus
ENSCATG00000036701	SSB	83	49.485	ENSLBEG00000017345	ssb	72	50.172	Labrus_bergylta
ENSCATG00000036701	SSB	95	58.333	ENSLACG00000014056	SSB	80	62.763	Latimeria_chalumnae
ENSCATG00000036701	SSB	83	64.726	ENSLOCG00000007933	ssb	72	65.068	Lepisosteus_oculatus
ENSCATG00000036701	SSB	55	67.016	ENSLAFG00000026721	-	62	67.016	Loxodonta_africana
ENSCATG00000036701	SSB	100	61.235	ENSLAFG00000028909	-	100	61.235	Loxodonta_africana
ENSCATG00000036701	SSB	100	67.299	ENSLAFG00000000867	-	100	68.720	Loxodonta_africana
ENSCATG00000036701	SSB	86	65.903	ENSMFAG00000041478	-	100	65.903	Macaca_fascicularis
ENSCATG00000036701	SSB	100	77.778	ENSMFAG00000039066	SSB	100	77.778	Macaca_fascicularis
ENSCATG00000036701	SSB	93	75.466	ENSMMUG00000011724	-	74	75.466	Macaca_mulatta
ENSCATG00000036701	SSB	100	77.778	ENSMMUG00000023051	SSB	100	77.778	Macaca_mulatta
ENSCATG00000036701	SSB	99	63.662	ENSMMUG00000039889	-	100	63.944	Macaca_mulatta
ENSCATG00000036701	SSB	100	65.854	ENSMNEG00000028321	SSB	100	65.854	Macaca_nemestrina
ENSCATG00000036701	SSB	86	65.903	ENSMNEG00000034698	-	100	65.903	Macaca_nemestrina
ENSCATG00000036701	SSB	100	67.109	ENSMLEG00000042644	-	100	67.109	Mandrillus_leucophaeus
ENSCATG00000036701	SSB	100	77.778	ENSMLEG00000035717	SSB	100	77.778	Mandrillus_leucophaeus
ENSCATG00000036701	SSB	83	54.639	ENSMAMG00000004800	ssb	72	54.983	Mastacembelus_armatus
ENSCATG00000036701	SSB	83	50.519	ENSMZEG00005005749	ssb	71	50.173	Maylandia_zebra
ENSCATG00000036701	SSB	93	67.674	ENSMGAG00000010328	SSB	78	67.674	Meleagris_gallopavo
ENSCATG00000036701	SSB	99	74.194	ENSMICG00000028252	-	99	74.690	Microcebus_murinus
ENSCATG00000036701	SSB	98	67.506	ENSMICG00000033304	-	96	67.506	Microcebus_murinus
ENSCATG00000036701	SSB	84	75.667	ENSMODG00000008227	-	72	76.667	Monodelphis_domestica
ENSCATG00000036701	SSB	93	56.707	ENSMODG00000019271	-	74	56.707	Monodelphis_domestica
ENSCATG00000036701	SSB	67	90.909	ENSMODG00000007027	-	67	90.909	Monodelphis_domestica
ENSCATG00000036701	SSB	72	49.606	ENSMALG00000008045	ssb	63	54.198	Monopterus_albus
ENSCATG00000036701	SSB	100	58.670	MGP_CAROLIEiJ_G0023629	-	100	67.660	Mus_caroli
ENSCATG00000036701	SSB	100	57.957	ENSMUSG00000068882	Ssb	99	66.383	Mus_musculus
ENSCATG00000036701	SSB	100	58.156	MGP_PahariEiJ_G0025081	-	100	66.667	Mus_pahari
ENSCATG00000036701	SSB	100	57.957	MGP_SPRETEiJ_G0024551	Ssb	100	66.383	Mus_spretus
ENSCATG00000036701	SSB	100	73.333	ENSMPUG00000000785	SSB	100	73.333	Mustela_putorius_furo
ENSCATG00000036701	SSB	100	69.524	ENSMLUG00000016316	SSB	100	69.524	Myotis_lucifugus
ENSCATG00000036701	SSB	83	50.865	ENSNBRG00000012661	ssb	71	50.519	Neolamprologus_brichardi
ENSCATG00000036701	SSB	100	62.432	ENSNLEG00000028754	-	100	62.973	Nomascus_leucogenys
ENSCATG00000036701	SSB	100	77.531	ENSNLEG00000004958	SSB	100	77.531	Nomascus_leucogenys
ENSCATG00000036701	SSB	54	74.611	ENSMEUG00000001650	-	73	74.611	Notamacropus_eugenii
ENSCATG00000036701	SSB	84	75.862	ENSOPRG00000008475	-	100	75.862	Ochotona_princeps
ENSCATG00000036701	SSB	93	79.878	ENSODEG00000004202	-	83	79.878	Octodon_degus
ENSCATG00000036701	SSB	83	49.481	ENSONIG00000008776	ssb	71	49.135	Oreochromis_niloticus
ENSCATG00000036701	SSB	93	75.000	ENSOANG00000008543	SSB	78	75.000	Ornithorhynchus_anatinus
ENSCATG00000036701	SSB	100	74.074	ENSOCUG00000010396	SSB	100	74.321	Oryctolagus_cuniculus
ENSCATG00000036701	SSB	83	54.296	ENSORLG00000017208	ssb	72	54.639	Oryzias_latipes
ENSCATG00000036701	SSB	83	54.639	ENSORLG00020022574	ssb	72	54.983	Oryzias_latipes_hni
ENSCATG00000036701	SSB	83	53.952	ENSORLG00015016592	ssb	72	54.296	Oryzias_latipes_hsok
ENSCATG00000036701	SSB	83	55.862	ENSOMEG00000003193	ssb	72	56.897	Oryzias_melastigma
ENSCATG00000036701	SSB	100	69.431	ENSOGAG00000029768	SSB	100	69.431	Otolemur_garnettii
ENSCATG00000036701	SSB	100	72.346	ENSOARG00000002906	SSB	100	71.358	Ovis_aries
ENSCATG00000036701	SSB	84	82.759	ENSPPAG00000006189	-	74	82.759	Pan_paniscus
ENSCATG00000036701	SSB	100	68.135	ENSPPAG00000032427	-	100	68.135	Pan_paniscus
ENSCATG00000036701	SSB	100	76.961	ENSPPAG00000042673	SSB	100	76.961	Pan_paniscus
ENSCATG00000036701	SSB	100	74.138	ENSPPRG00000006599	SSB	100	74.138	Panthera_pardus
ENSCATG00000036701	SSB	100	74.138	ENSPTIG00000011021	SSB	97	74.138	Panthera_tigris_altaica
ENSCATG00000036701	SSB	100	63.049	ENSPTRG00000042880	-	100	63.049	Pan_troglodytes
ENSCATG00000036701	SSB	100	76.961	ENSPTRG00000012620	SSB	100	76.961	Pan_troglodytes
ENSCATG00000036701	SSB	100	61.333	ENSPANG00000034126	-	100	61.867	Papio_anubis
ENSCATG00000036701	SSB	100	77.778	ENSPANG00000007440	SSB	100	77.778	Papio_anubis
ENSCATG00000036701	SSB	98	64.960	ENSPANG00000031877	-	95	64.960	Papio_anubis
ENSCATG00000036701	SSB	83	57.586	ENSPKIG00000019325	ssb	72	58.621	Paramormyrops_kingsleyae
ENSCATG00000036701	SSB	100	57.908	ENSPSIG00000002265	SSB	93	58.795	Pelodiscus_sinensis
ENSCATG00000036701	SSB	84	51.351	ENSPMGG00000020075	ssb	77	51.689	Periophthalmus_magnuspinnatus
ENSCATG00000036701	SSB	91	38.793	ENSPMAG00000002982	ssb	68	43.522	Petromyzon_marinus
ENSCATG00000036701	SSB	93	75.076	ENSPCIG00000028591	-	78	75.380	Phascolarctos_cinereus
ENSCATG00000036701	SSB	83	52.577	ENSPFOG00000009650	ssb	72	52.921	Poecilia_formosa
ENSCATG00000036701	SSB	83	52.234	ENSPLAG00000020498	ssb	72	52.577	Poecilia_latipinna
ENSCATG00000036701	SSB	83	51.890	ENSPMEG00000001051	ssb	72	52.234	Poecilia_mexicana
ENSCATG00000036701	SSB	77	52.788	ENSPREG00000003708	ssb	70	53.160	Poecilia_reticulata
ENSCATG00000036701	SSB	100	77.531	ENSPPYG00000012919	SSB	100	77.531	Pongo_abelii
ENSCATG00000036701	SSB	84	86.552	ENSPCAG00000010276	SSB	75	86.552	Procavia_capensis
ENSCATG00000036701	SSB	100	72.593	ENSPCOG00000015741	-	100	72.346	Propithecus_coquereli
ENSCATG00000036701	SSB	100	64.198	ENSPCOG00000023189	-	100	63.210	Propithecus_coquereli
ENSCATG00000036701	SSB	85	83.946	ENSPVAG00000006615	SSB	81	83.946	Pteropus_vampyrus
ENSCATG00000036701	SSB	83	50.519	ENSPNYG00000006444	ssb	71	50.173	Pundamilia_nyererei
ENSCATG00000036701	SSB	83	56.610	ENSPNAG00000011708	ssb	72	56.610	Pygocentrus_nattereri
ENSCATG00000036701	SSB	100	58.432	ENSRNOG00000007998	Ssb	100	58.432	Rattus_norvegicus
ENSCATG00000036701	SSB	100	72.973	ENSRNOG00000011606	AABR07061825.1	87	72.973	Rattus_norvegicus
ENSCATG00000036701	SSB	100	74.928	ENSRBIG00000029918	-	100	74.928	Rhinopithecus_bieti
ENSCATG00000036701	SSB	84	92.759	ENSRBIG00000041608	-	78	92.759	Rhinopithecus_bieti
ENSCATG00000036701	SSB	100	61.463	ENSRBIG00000041972	SSB	100	62.195	Rhinopithecus_bieti
ENSCATG00000036701	SSB	84	82.414	ENSRBIG00000041232	-	76	82.414	Rhinopithecus_bieti
ENSCATG00000036701	SSB	84	98.276	ENSRROG00000034102	-	72	98.276	Rhinopithecus_roxellana
ENSCATG00000036701	SSB	100	72.872	ENSRROG00000007149	-	100	72.872	Rhinopithecus_roxellana
ENSCATG00000036701	SSB	100	77.531	ENSRROG00000040346	SSB	100	77.531	Rhinopithecus_roxellana
ENSCATG00000036701	SSB	97	67.268	ENSRROG00000031684	-	100	67.268	Rhinopithecus_roxellana
ENSCATG00000036701	SSB	100	76.790	ENSSBOG00000027204	SSB	100	76.790	Saimiri_boliviensis_boliviensis
ENSCATG00000036701	SSB	100	65.025	ENSSHAG00000018062	SSB	72	82.474	Sarcophilus_harrisii
ENSCATG00000036701	SSB	84	60.544	ENSSFOG00015000550	ssb	72	61.224	Scleropages_formosus
ENSCATG00000036701	SSB	83	50.000	ENSSMAG00000013885	ssb	69	54.440	Scophthalmus_maximus
ENSCATG00000036701	SSB	83	53.265	ENSSDUG00000020117	ssb	83	48.980	Seriola_dumerili
ENSCATG00000036701	SSB	83	51.389	ENSSLDG00000002525	ssb	83	47.059	Seriola_lalandi_dorsalis
ENSCATG00000036701	SSB	93	84.146	ENSSARG00000007747	SSB	83	84.146	Sorex_araneus
ENSCATG00000036701	SSB	93	68.615	ENSSPUG00000012112	SSB	78	68.615	Sphenodon_punctatus
ENSCATG00000036701	SSB	83	51.890	ENSSPAG00000005696	ssb	71	52.234	Stegastes_partitus
ENSCATG00000036701	SSB	98	56.675	ENSSSCG00000015938	SSB	98	57.035	Sus_scrofa
ENSCATG00000036701	SSB	93	67.771	ENSTGUG00000007942	SSB	78	67.771	Taeniopygia_guttata
ENSCATG00000036701	SSB	83	52.595	ENSTRUG00000017839	ssb	71	53.448	Takifugu_rubripes
ENSCATG00000036701	SSB	73	54.545	ENSTNIG00000000915	ssb	68	54.545	Tetraodon_nigroviridis
ENSCATG00000036701	SSB	74	79.638	ENSTBEG00000009056	SSB	62	79.638	Tupaia_belangeri
ENSCATG00000036701	SSB	100	73.399	ENSTTRG00000002152	SSB	100	73.399	Tursiops_truncatus
ENSCATG00000036701	SSB	92	73.475	ENSUAMG00000027833	SSB	99	73.475	Ursus_americanus
ENSCATG00000036701	SSB	100	74.384	ENSUMAG00000013907	SSB	100	74.384	Ursus_maritimus
ENSCATG00000036701	SSB	100	73.333	ENSVPAG00000007183	SSB	100	73.333	Vicugna_pacos
ENSCATG00000036701	SSB	100	73.892	ENSVVUG00000016573	SSB	78	73.892	Vulpes_vulpes
ENSCATG00000036701	SSB	100	44.626	ENSXETG00000025402	ssb	100	46.387	Xenopus_tropicalis
ENSCATG00000036701	SSB	77	49.627	ENSXCOG00000019109	ssb	70	50.000	Xiphophorus_couchianus
ENSCATG00000036701	SSB	83	51.203	ENSXMAG00000004888	ssb	72	51.546	Xiphophorus_maculatus