EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000036939 (Gene tree)
Gene ID: 105585758
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 6638 bases
Position: chrKQ012885.1:33088713-33095350
Accession: 105585758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000027086	PseudoU_synth_2	PF00849.22	1.7e-20	1	1
ENSCATP00000027088	PseudoU_synth_2	PF00849.22	3.8e-19	1	1
ENSCATP00000027087	PseudoU_synth_2	PF00849.22	9.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000051329	RPUSD3-202	1011	-	ENSCATP00000027087	336 (aa)	-	A0A2K5MPC5
ENSCATT00000051328	RPUSD3-201	1367	XM_012060034	ENSCATP00000027086	351 (aa)	XP_011915424	A0A2K5MPF8
ENSCATT00000051330	RPUSD3-203	639	-	ENSCATP00000027088	212 (aa)	-	A0A2K5MPC6

Gene Model

Click here to download ENSCATG00000036939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000036939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000036939	RPUSD3	100	93.868	ENSG00000156990	RPUSD3	100	93.868	Homo_sapiens
ENSCATG00000036939	RPUSD3	100	80.114	ENSAMEG00000016227	RPUSD3	100	80.114	Ailuropoda_melanoleuca
ENSCATG00000036939	RPUSD3	83	56.818	ENSACAG00000009836	RPUSD3	81	56.338	Anolis_carolinensis
ENSCATG00000036939	RPUSD3	91	89.119	ENSANAG00000019945	-	79	89.340	Aotus_nancymaae
ENSCATG00000036939	RPUSD3	99	64.762	ENSANAG00000007127	-	100	64.762	Aotus_nancymaae
ENSCATG00000036939	RPUSD3	99	81.818	ENSANAG00000038118	-	98	81.818	Aotus_nancymaae
ENSCATG00000036939	RPUSD3	98	81.686	ENSBTAG00000007968	RPUSD3	100	81.686	Bos_taurus
ENSCATG00000036939	RPUSD3	100	79.545	ENSCAFG00000029733	RPUSD3	100	79.545	Canis_familiaris
ENSCATG00000036939	RPUSD3	100	79.545	ENSCAFG00020008582	RPUSD3	100	79.545	Canis_lupus_dingo
ENSCATG00000036939	RPUSD3	98	81.395	ENSCHIG00000026027	RPUSD3	100	81.395	Capra_hircus
ENSCATG00000036939	RPUSD3	98	80.240	ENSTSYG00000009994	RPUSD3	99	80.240	Carlito_syrichta
ENSCATG00000036939	RPUSD3	74	82.308	ENSCAPG00000017559	RPUSD3	98	82.308	Cavia_aperea
ENSCATG00000036939	RPUSD3	93	67.077	ENSCPOG00000037956	RPUSD3	86	71.341	Cavia_porcellus
ENSCATG00000036939	RPUSD3	100	90.094	ENSCCAG00000029530	RPUSD3	100	90.094	Cebus_capucinus
ENSCATG00000036939	RPUSD3	100	97.436	ENSCSAG00000010506	RPUSD3	100	97.436	Chlorocebus_sabaeus
ENSCATG00000036939	RPUSD3	53	85.714	ENSCHOG00000010151	-	67	85.714	Choloepus_hoffmanni
ENSCATG00000036939	RPUSD3	73	56.275	ENSCPBG00000008825	RPUSD3	95	55.814	Chrysemys_picta_bellii
ENSCATG00000036939	RPUSD3	100	97.642	ENSCANG00000040711	RPUSD3	100	97.642	Colobus_angolensis_palliatus
ENSCATG00000036939	RPUSD3	99	72.334	ENSCGRG00001004923	Rpusd3	96	72.334	Cricetulus_griseus_chok1gshd
ENSCATG00000036939	RPUSD3	96	73.591	ENSCGRG00000018315	Rpusd3	98	73.591	Cricetulus_griseus_crigri
ENSCATG00000036939	RPUSD3	99	76.791	ENSDNOG00000039160	RPUSD3	92	76.791	Dasypus_novemcinctus
ENSCATG00000036939	RPUSD3	81	73.118	ENSDORG00000026827	Rpusd3	92	78.358	Dipodomys_ordii
ENSCATG00000036939	RPUSD3	100	71.307	ENSETEG00000006538	RPUSD3	99	71.307	Echinops_telfairi
ENSCATG00000036939	RPUSD3	81	36.782	ENSEBUG00000015605	RPUSD3	67	38.835	Eptatretus_burgeri
ENSCATG00000036939	RPUSD3	99	81.662	ENSEASG00005014160	RPUSD3	97	81.662	Equus_asinus_asinus
ENSCATG00000036939	RPUSD3	99	82.808	ENSECAG00000019988	RPUSD3	97	82.808	Equus_caballus
ENSCATG00000036939	RPUSD3	94	57.988	ENSEEUG00000007353	RPUSD3	95	57.988	Erinaceus_europaeus
ENSCATG00000036939	RPUSD3	100	80.114	ENSFCAG00000014199	RPUSD3	100	80.114	Felis_catus
ENSCATG00000036939	RPUSD3	77	50.183	ENSFALG00000012968	RPUSD3	99	47.619	Ficedula_albicollis
ENSCATG00000036939	RPUSD3	75	83.588	ENSFDAG00000008350	RPUSD3	80	83.908	Fukomys_damarensis
ENSCATG00000036939	RPUSD3	75	55.513	ENSGAGG00000007493	RPUSD3	82	56.439	Gopherus_agassizii
ENSCATG00000036939	RPUSD3	100	94.811	ENSGGOG00000013120	RPUSD3	100	94.811	Gorilla_gorilla
ENSCATG00000036939	RPUSD3	87	79.348	ENSHGLG00000011722	RPUSD3	96	68.717	Heterocephalus_glaber_female
ENSCATG00000036939	RPUSD3	87	79.348	ENSHGLG00100016038	RPUSD3	96	68.717	Heterocephalus_glaber_male
ENSCATG00000036939	RPUSD3	95	83.168	ENSSTOG00000002125	RPUSD3	99	78.797	Ictidomys_tridecemlineatus
ENSCATG00000036939	RPUSD3	98	73.547	ENSJJAG00000012679	Rpusd3	100	73.547	Jaculus_jaculus
ENSCATG00000036939	RPUSD3	98	80.814	ENSLAFG00000017501	RPUSD3	100	80.814	Loxodonta_africana
ENSCATG00000036939	RPUSD3	100	98.575	ENSMFAG00000032407	RPUSD3	100	98.575	Macaca_fascicularis
ENSCATG00000036939	RPUSD3	100	98.810	ENSMMUG00000010628	RPUSD3	100	98.810	Macaca_mulatta
ENSCATG00000036939	RPUSD3	100	98.291	ENSMNEG00000040308	RPUSD3	100	98.291	Macaca_nemestrina
ENSCATG00000036939	RPUSD3	100	99.528	ENSMLEG00000033940	RPUSD3	100	99.528	Mandrillus_leucophaeus
ENSCATG00000036939	RPUSD3	95	75.821	ENSMAUG00000015473	Rpusd3	97	75.821	Mesocricetus_auratus
ENSCATG00000036939	RPUSD3	99	82.464	ENSMICG00000002315	RPUSD3	100	81.105	Microcebus_murinus
ENSCATG00000036939	RPUSD3	97	73.607	ENSMOCG00000022613	Rpusd3	99	73.607	Microtus_ochrogaster
ENSCATG00000036939	RPUSD3	92	56.122	ENSMODG00000005210	RPUSD3	80	59.539	Monodelphis_domestica
ENSCATG00000036939	RPUSD3	98	72.674	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.674	Mus_caroli
ENSCATG00000036939	RPUSD3	98	72.965	ENSMUSG00000051169	Rpusd3	100	72.965	Mus_musculus
ENSCATG00000036939	RPUSD3	98	73.547	MGP_PahariEiJ_G0022476	Rpusd3	100	73.547	Mus_pahari
ENSCATG00000036939	RPUSD3	98	72.674	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.674	Mus_spretus
ENSCATG00000036939	RPUSD3	99	77.650	ENSMPUG00000017132	RPUSD3	99	77.650	Mustela_putorius_furo
ENSCATG00000036939	RPUSD3	97	83.673	ENSMLUG00000006135	RPUSD3	99	83.673	Myotis_lucifugus
ENSCATG00000036939	RPUSD3	94	75.904	ENSNGAG00000023704	Rpusd3	97	75.904	Nannospalax_galili
ENSCATG00000036939	RPUSD3	100	94.811	ENSNLEG00000004214	RPUSD3	100	94.811	Nomascus_leucogenys
ENSCATG00000036939	RPUSD3	74	67.433	ENSMEUG00000013098	-	100	67.433	Notamacropus_eugenii
ENSCATG00000036939	RPUSD3	95	63.018	ENSOPRG00000002300	RPUSD3	96	63.018	Ochotona_princeps
ENSCATG00000036939	RPUSD3	74	80.843	ENSODEG00000018137	RPUSD3	90	80.843	Octodon_degus
ENSCATG00000036939	RPUSD3	84	52.247	ENSOANG00000012081	-	100	51.568	Ornithorhynchus_anatinus
ENSCATG00000036939	RPUSD3	89	79.474	ENSOCUG00000027885	RPUSD3	99	67.529	Oryctolagus_cuniculus
ENSCATG00000036939	RPUSD3	95	83.251	ENSOGAG00000012592	RPUSD3	99	84.295	Otolemur_garnettii
ENSCATG00000036939	RPUSD3	99	82.051	ENSOARG00000005928	RPUSD3	99	82.051	Ovis_aries
ENSCATG00000036939	RPUSD3	100	92.925	ENSPPAG00000038083	RPUSD3	100	92.925	Pan_paniscus
ENSCATG00000036939	RPUSD3	100	80.398	ENSPPRG00000024433	RPUSD3	100	80.398	Panthera_pardus
ENSCATG00000036939	RPUSD3	100	81.009	ENSPTIG00000006828	RPUSD3	100	81.395	Panthera_tigris_altaica
ENSCATG00000036939	RPUSD3	100	93.868	ENSPTRG00000051760	RPUSD3	100	93.868	Pan_troglodytes
ENSCATG00000036939	RPUSD3	100	99.528	ENSPANG00000023885	RPUSD3	100	99.528	Papio_anubis
ENSCATG00000036939	RPUSD3	98	73.837	ENSPEMG00000017245	Rpusd3	100	73.837	Peromyscus_maniculatus_bairdii
ENSCATG00000036939	RPUSD3	85	64.286	ENSPCIG00000021901	RPUSD3	84	64.483	Phascolarctos_cinereus
ENSCATG00000036939	RPUSD3	100	92.308	ENSPPYG00000013676	RPUSD3	100	92.308	Pongo_abelii
ENSCATG00000036939	RPUSD3	95	58.911	ENSPCAG00000013731	-	100	60.554	Procavia_capensis
ENSCATG00000036939	RPUSD3	100	85.227	ENSPCOG00000018314	RPUSD3	100	85.227	Propithecus_coquereli
ENSCATG00000036939	RPUSD3	100	79.545	ENSPVAG00000011107	RPUSD3	100	79.545	Pteropus_vampyrus
ENSCATG00000036939	RPUSD3	98	72.036	ENSRNOG00000009084	Rpusd3	100	72.036	Rattus_norvegicus
ENSCATG00000036939	RPUSD3	100	98.585	ENSRBIG00000041230	RPUSD3	100	98.585	Rhinopithecus_bieti
ENSCATG00000036939	RPUSD3	100	98.585	ENSRROG00000043328	RPUSD3	100	98.585	Rhinopithecus_roxellana
ENSCATG00000036939	RPUSD3	100	88.604	ENSSBOG00000036106	RPUSD3	100	88.604	Saimiri_boliviensis_boliviensis
ENSCATG00000036939	RPUSD3	95	57.426	ENSSHAG00000015536	RPUSD3	99	59.355	Sarcophilus_harrisii
ENSCATG00000036939	RPUSD3	100	80.966	ENSSSCG00000011555	RPUSD3	100	80.966	Sus_scrofa
ENSCATG00000036939	RPUSD3	73	47.097	ENSTGUG00000008744	RPUSD3	93	50.691	Taeniopygia_guttata
ENSCATG00000036939	RPUSD3	95	81.188	ENSTBEG00000000176	RPUSD3	100	77.855	Tupaia_belangeri
ENSCATG00000036939	RPUSD3	100	80.966	ENSTTRG00000007544	RPUSD3	100	80.966	Tursiops_truncatus
ENSCATG00000036939	RPUSD3	96	80.000	ENSUAMG00000011354	RPUSD3	97	81.731	Ursus_americanus
ENSCATG00000036939	RPUSD3	100	79.261	ENSUMAG00000018830	RPUSD3	100	79.261	Ursus_maritimus
ENSCATG00000036939	RPUSD3	99	80.569	ENSVVUG00000023735	RPUSD3	100	80.814	Vulpes_vulpes
ENSCATG00000036939	RPUSD3	81	49.711	ENSXETG00000023546	rpusd3	99	50.178	Xenopus_tropicalis