EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000038799 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 577 bases
Position: chrKQ012553.1:5611682-5612258
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000031352	LSM	PF01423.22	2.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000055617	-	216	-	ENSCATP00000031352	71 (aa)	-	A0A2K5N1I1

Gene Model

Click here to download ENSCATG00000038799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000038799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000038799	-	86	43.077	ENSCATG00000003132	-	73	42.424
ENSCATG00000038799	-	100	72.500	ENSCATG00000002770	-	100	72.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000038799	-	100	72.500	ENSG00000164167	LSM6	100	72.500	Homo_sapiens
ENSCATG00000038799	-	100	72.500	ENSAPOG00000019832	lsm6	100	72.500	Acanthochromis_polyacanthus
ENSCATG00000038799	-	100	72.500	ENSAMEG00000016671	LSM6	100	72.500	Ailuropoda_melanoleuca
ENSCATG00000038799	-	100	72.500	ENSACIG00000016711	lsm6	100	72.500	Amphilophus_citrinellus
ENSCATG00000038799	-	100	72.500	ENSAOCG00000002110	lsm6	52	72.500	Amphiprion_ocellaris
ENSCATG00000038799	-	100	72.500	ENSAPEG00000023992	lsm6	100	72.500	Amphiprion_percula
ENSCATG00000038799	-	100	72.500	ENSATEG00000012610	lsm6	100	72.500	Anabas_testudineus
ENSCATG00000038799	-	94	72.368	ENSAPLG00000012594	LSM6	97	72.368	Anas_platyrhynchos
ENSCATG00000038799	-	100	72.500	ENSACAG00000004004	LSM6	100	72.500	Anolis_carolinensis
ENSCATG00000038799	-	100	72.500	ENSANAG00000030568	-	100	72.500	Aotus_nancymaae
ENSCATG00000038799	-	100	72.000	ENSANAG00000021839	-	100	72.000	Aotus_nancymaae
ENSCATG00000038799	-	100	72.500	ENSACLG00000025621	lsm6	100	72.500	Astatotilapia_calliptera
ENSCATG00000038799	-	100	73.750	ENSAMXG00000038738	lsm6	100	73.750	Astyanax_mexicanus
ENSCATG00000038799	-	100	71.250	ENSBTAG00000052085	-	100	71.250	Bos_taurus
ENSCATG00000038799	-	100	72.500	ENSBTAG00000014060	LSM6	100	72.500	Bos_taurus
ENSCATG00000038799	-	92	59.459	WBGene00003080	lsm-6	96	59.459	Caenorhabditis_elegans
ENSCATG00000038799	-	100	72.500	ENSCJAG00000002482	LSM6	100	72.500	Callithrix_jacchus
ENSCATG00000038799	-	100	72.500	ENSCAFG00000007738	LSM6	100	72.500	Canis_familiaris
ENSCATG00000038799	-	100	72.500	ENSCAFG00020025902	LSM6	100	72.500	Canis_lupus_dingo
ENSCATG00000038799	-	80	83.607	ENSCHIG00000012864	-	86	83.607	Capra_hircus
ENSCATG00000038799	-	100	65.789	ENSCHIG00000024198	-	95	65.789	Capra_hircus
ENSCATG00000038799	-	100	72.500	ENSCHIG00000010334	-	100	72.500	Capra_hircus
ENSCATG00000038799	-	100	72.500	ENSTSYG00000026972	LSM6	100	72.500	Carlito_syrichta
ENSCATG00000038799	-	92	63.768	ENSTSYG00000012759	-	87	63.768	Carlito_syrichta
ENSCATG00000038799	-	80	81.967	ENSCAPG00000011179	-	94	81.967	Cavia_aperea
ENSCATG00000038799	-	100	72.500	ENSCAPG00000008104	LSM6	100	72.500	Cavia_aperea
ENSCATG00000038799	-	100	72.500	ENSCPOG00000032655	LSM6	100	72.500	Cavia_porcellus
ENSCATG00000038799	-	100	72.500	ENSCCAG00000036437	LSM6	100	72.500	Cebus_capucinus
ENSCATG00000038799	-	99	70.886	ENSCCAG00000020665	-	99	70.886	Cebus_capucinus
ENSCATG00000038799	-	75	70.175	ENSCLAG00000005685	-	81	70.175	Chinchilla_lanigera
ENSCATG00000038799	-	100	72.500	ENSCLAG00000005495	LSM6	100	72.500	Chinchilla_lanigera
ENSCATG00000038799	-	100	72.500	ENSCSAG00000003421	LSM6	100	72.500	Chlorocebus_sabaeus
ENSCATG00000038799	-	100	66.667	ENSCHOG00000003420	LSM6	100	66.667	Choloepus_hoffmanni
ENSCATG00000038799	-	100	72.500	ENSCPBG00000027472	LSM6	84	72.500	Chrysemys_picta_bellii
ENSCATG00000038799	-	93	72.000	ENSCING00000019152	-	91	72.000	Ciona_intestinalis
ENSCATG00000038799	-	93	73.333	ENSCSAVG00000002065	-	91	73.333	Ciona_savignyi
ENSCATG00000038799	-	100	72.500	ENSCANG00000041263	-	100	72.500	Colobus_angolensis_palliatus
ENSCATG00000038799	-	100	90.141	ENSCANG00000035214	-	100	90.141	Colobus_angolensis_palliatus
ENSCATG00000038799	-	100	72.500	ENSCANG00000006849	-	100	72.500	Colobus_angolensis_palliatus
ENSCATG00000038799	-	100	72.500	ENSCGRG00001017142	Lsm6	100	72.500	Cricetulus_griseus_chok1gshd
ENSCATG00000038799	-	100	72.500	ENSCGRG00000008320	Lsm6	100	72.500	Cricetulus_griseus_crigri
ENSCATG00000038799	-	100	72.500	ENSCSEG00000000423	lsm6	100	72.500	Cynoglossus_semilaevis
ENSCATG00000038799	-	100	72.500	ENSCVAG00000001592	lsm6	100	72.500	Cyprinodon_variegatus
ENSCATG00000038799	-	100	73.750	ENSDARG00000036995	lsm6	100	73.750	Danio_rerio
ENSCATG00000038799	-	80	83.607	ENSDNOG00000040186	-	66	83.607	Dasypus_novemcinctus
ENSCATG00000038799	-	100	72.500	ENSDNOG00000044848	-	100	72.500	Dasypus_novemcinctus
ENSCATG00000038799	-	100	72.500	ENSDORG00000000933	Lsm6	100	72.500	Dipodomys_ordii
ENSCATG00000038799	-	94	59.211	FBgn0034564	CG9344	96	59.211	Drosophila_melanogaster
ENSCATG00000038799	-	55	62.500	ENSETEG00000013098	LSM6	100	62.500	Echinops_telfairi
ENSCATG00000038799	-	100	71.250	ENSEBUG00000017073	lsm6	100	71.250	Eptatretus_burgeri
ENSCATG00000038799	-	80	83.607	ENSEASG00005001533	LSM6	64	83.607	Equus_asinus_asinus
ENSCATG00000038799	-	100	72.500	ENSECAG00000021036	LSM6	100	72.500	Equus_caballus
ENSCATG00000038799	-	99	48.101	ENSEEUG00000002101	LSM6	100	48.101	Erinaceus_europaeus
ENSCATG00000038799	-	100	73.750	ENSELUG00000014301	LSM6	100	73.750	Esox_lucius
ENSCATG00000038799	-	100	72.500	ENSFCAG00000003047	LSM6	100	72.500	Felis_catus
ENSCATG00000038799	-	100	72.500	ENSFALG00000005509	LSM6	92	72.500	Ficedula_albicollis
ENSCATG00000038799	-	100	72.500	ENSFDAG00000020913	-	100	72.500	Fukomys_damarensis
ENSCATG00000038799	-	100	70.000	ENSFDAG00000019073	-	100	70.000	Fukomys_damarensis
ENSCATG00000038799	-	100	72.500	ENSFHEG00000007948	lsm6	100	72.500	Fundulus_heteroclitus
ENSCATG00000038799	-	100	72.500	ENSGMOG00000015550	lsm6	100	72.500	Gadus_morhua
ENSCATG00000038799	-	100	72.500	ENSGALG00000009985	LSM6	100	72.500	Gallus_gallus
ENSCATG00000038799	-	100	72.500	ENSGAFG00000017763	lsm6	100	72.500	Gambusia_affinis
ENSCATG00000038799	-	99	73.418	ENSGACG00000017223	lsm6	99	73.418	Gasterosteus_aculeatus
ENSCATG00000038799	-	100	72.500	ENSGAGG00000020980	LSM6	100	72.500	Gopherus_agassizii
ENSCATG00000038799	-	100	72.500	ENSGGOG00000001310	LSM6	100	72.500	Gorilla_gorilla
ENSCATG00000038799	-	100	72.500	ENSHBUG00000008618	lsm6	100	72.500	Haplochromis_burtoni
ENSCATG00000038799	-	100	72.500	ENSHGLG00000000205	LSM6	100	72.500	Heterocephalus_glaber_female
ENSCATG00000038799	-	100	72.500	ENSHGLG00100014341	LSM6	100	72.500	Heterocephalus_glaber_male
ENSCATG00000038799	-	100	72.500	ENSHCOG00000005591	lsm6	100	72.500	Hippocampus_comes
ENSCATG00000038799	-	100	72.500	ENSIPUG00000004508	lsm6	100	72.500	Ictalurus_punctatus
ENSCATG00000038799	-	100	72.500	ENSSTOG00000002678	LSM6	100	72.500	Ictidomys_tridecemlineatus
ENSCATG00000038799	-	100	72.500	ENSJJAG00000013845	-	100	72.500	Jaculus_jaculus
ENSCATG00000038799	-	94	61.842	ENSJJAG00000016942	-	96	61.842	Jaculus_jaculus
ENSCATG00000038799	-	100	68.750	ENSJJAG00000011211	-	100	68.750	Jaculus_jaculus
ENSCATG00000038799	-	100	72.500	ENSKMAG00000004105	lsm6	100	72.500	Kryptolebias_marmoratus
ENSCATG00000038799	-	100	72.500	ENSLBEG00000018441	lsm6	100	72.500	Labrus_bergylta
ENSCATG00000038799	-	100	72.500	ENSLACG00000006937	LSM6	100	72.500	Latimeria_chalumnae
ENSCATG00000038799	-	100	72.500	ENSLOCG00000017683	-	100	72.500	Lepisosteus_oculatus
ENSCATG00000038799	-	100	73.750	ENSLOCG00000008852	lsm6	100	73.750	Lepisosteus_oculatus
ENSCATG00000038799	-	100	72.500	ENSLAFG00000001952	LSM6	100	72.500	Loxodonta_africana
ENSCATG00000038799	-	100	72.500	ENSMFAG00000033073	LSM6	100	72.500	Macaca_fascicularis
ENSCATG00000038799	-	100	97.183	ENSMNEG00000040412	-	100	97.183	Macaca_nemestrina
ENSCATG00000038799	-	100	72.500	ENSMNEG00000034820	-	100	72.500	Macaca_nemestrina
ENSCATG00000038799	-	100	72.500	ENSMLEG00000035153	LSM6	100	72.500	Mandrillus_leucophaeus
ENSCATG00000038799	-	100	72.500	ENSMAMG00000014029	lsm6	100	72.500	Mastacembelus_armatus
ENSCATG00000038799	-	100	72.500	ENSMZEG00005009146	lsm6	100	72.500	Maylandia_zebra
ENSCATG00000038799	-	100	72.500	ENSMGAG00000003802	LSM6	100	72.500	Meleagris_gallopavo
ENSCATG00000038799	-	100	72.500	ENSMAUG00000014938	Lsm6	100	72.500	Mesocricetus_auratus
ENSCATG00000038799	-	100	72.500	ENSMICG00000042599	LSM6	100	72.500	Microcebus_murinus
ENSCATG00000038799	-	80	83.607	ENSMICG00000047411	-	72	83.607	Microcebus_murinus
ENSCATG00000038799	-	100	72.500	ENSMOCG00000020049	Lsm6	100	72.500	Microtus_ochrogaster
ENSCATG00000038799	-	100	69.620	ENSMMOG00000007379	-	100	69.620	Mola_mola
ENSCATG00000038799	-	100	72.500	ENSMMOG00000005470	lsm6	100	72.500	Mola_mola
ENSCATG00000038799	-	100	72.500	ENSMODG00000000526	LSM6	100	72.500	Monodelphis_domestica
ENSCATG00000038799	-	100	72.500	ENSMALG00000002419	lsm6	100	72.500	Monopterus_albus
ENSCATG00000038799	-	100	72.500	MGP_CAROLIEiJ_G0031245	Lsm6	100	72.500	Mus_caroli
ENSCATG00000038799	-	100	72.500	ENSMUSG00000031683	Lsm6	100	72.500	Mus_musculus
ENSCATG00000038799	-	100	72.500	MGP_PahariEiJ_G0022851	Lsm6	100	72.500	Mus_pahari
ENSCATG00000038799	-	100	72.500	MGP_SPRETEiJ_G0032365	Lsm6	100	72.500	Mus_spretus
ENSCATG00000038799	-	99	72.152	ENSMPUG00000006936	LSM6	92	72.152	Mustela_putorius_furo
ENSCATG00000038799	-	100	72.500	ENSMLUG00000026355	LSM6	100	72.500	Myotis_lucifugus
ENSCATG00000038799	-	100	72.500	ENSNGAG00000019116	Lsm6	100	72.500	Nannospalax_galili
ENSCATG00000038799	-	100	72.500	ENSNBRG00000004887	lsm6	100	72.500	Neolamprologus_brichardi
ENSCATG00000038799	-	100	72.500	ENSNLEG00000005584	LSM6	100	72.500	Nomascus_leucogenys
ENSCATG00000038799	-	100	75.949	ENSOPRG00000011199	LSM6	100	75.949	Ochotona_princeps
ENSCATG00000038799	-	100	72.500	ENSODEG00000002307	-	100	72.500	Octodon_degus
ENSCATG00000038799	-	100	71.250	ENSODEG00000020420	-	100	71.250	Octodon_degus
ENSCATG00000038799	-	94	65.789	ENSODEG00000018684	-	99	65.789	Octodon_degus
ENSCATG00000038799	-	100	72.500	ENSODEG00000019419	-	100	72.500	Octodon_degus
ENSCATG00000038799	-	100	72.500	ENSONIG00000010005	lsm6	100	72.500	Oreochromis_niloticus
ENSCATG00000038799	-	92	51.351	ENSOANG00000006895	-	95	51.351	Ornithorhynchus_anatinus
ENSCATG00000038799	-	92	51.351	ENSOANG00000006894	-	95	51.351	Ornithorhynchus_anatinus
ENSCATG00000038799	-	100	71.250	ENSORLG00000024158	lsm6	100	71.250	Oryzias_latipes
ENSCATG00000038799	-	100	71.250	ENSORLG00020017383	lsm6	100	71.250	Oryzias_latipes_hni
ENSCATG00000038799	-	100	71.250	ENSORLG00015016903	lsm6	100	71.250	Oryzias_latipes_hsok
ENSCATG00000038799	-	100	72.500	ENSOMEG00000000074	lsm6	100	72.500	Oryzias_melastigma
ENSCATG00000038799	-	100	72.500	ENSOGAG00000026665	-	100	72.500	Otolemur_garnettii
ENSCATG00000038799	-	100	72.500	ENSOGAG00000033153	-	100	72.500	Otolemur_garnettii
ENSCATG00000038799	-	80	83.607	ENSOARG00000008509	-	78	83.607	Ovis_aries
ENSCATG00000038799	-	99	69.620	ENSOARG00000011641	-	92	69.620	Ovis_aries
ENSCATG00000038799	-	100	72.500	ENSPPAG00000037929	LSM6	100	72.500	Pan_paniscus
ENSCATG00000038799	-	100	72.500	ENSPPRG00000012806	LSM6	100	72.500	Panthera_pardus
ENSCATG00000038799	-	100	72.500	ENSPTIG00000019769	LSM6	100	72.500	Panthera_tigris_altaica
ENSCATG00000038799	-	100	72.500	ENSPTRG00000016488	LSM6	100	72.500	Pan_troglodytes
ENSCATG00000038799	-	100	72.500	ENSPANG00000006552	LSM6	100	72.500	Papio_anubis
ENSCATG00000038799	-	100	73.750	ENSPKIG00000016176	lsm6	100	73.750	Paramormyrops_kingsleyae
ENSCATG00000038799	-	100	72.500	ENSPSIG00000016942	LSM6	100	72.500	Pelodiscus_sinensis
ENSCATG00000038799	-	100	72.500	ENSPMGG00000018004	lsm6	100	72.500	Periophthalmus_magnuspinnatus
ENSCATG00000038799	-	100	72.500	ENSPEMG00000012410	Lsm6	100	72.500	Peromyscus_maniculatus_bairdii
ENSCATG00000038799	-	100	71.250	ENSPMAG00000006949	lsm6	100	71.250	Petromyzon_marinus
ENSCATG00000038799	-	100	72.500	ENSPCIG00000023469	LSM6	71	83.607	Phascolarctos_cinereus
ENSCATG00000038799	-	100	72.500	ENSPFOG00000008881	lsm6	100	72.500	Poecilia_formosa
ENSCATG00000038799	-	100	72.500	ENSPLAG00000003202	lsm6	100	72.500	Poecilia_latipinna
ENSCATG00000038799	-	100	72.500	ENSPMEG00000004000	lsm6	100	72.500	Poecilia_mexicana
ENSCATG00000038799	-	100	72.500	ENSPREG00000023235	lsm6	100	72.500	Poecilia_reticulata
ENSCATG00000038799	-	100	72.500	ENSPPYG00000015105	LSM6	100	72.500	Pongo_abelii
ENSCATG00000038799	-	100	72.500	ENSPCOG00000013899	LSM6	100	72.500	Propithecus_coquereli
ENSCATG00000038799	-	100	72.500	ENSPNYG00000012614	lsm6	100	72.500	Pundamilia_nyererei
ENSCATG00000038799	-	100	73.750	ENSPNAG00000018779	lsm6	100	73.750	Pygocentrus_nattereri
ENSCATG00000038799	-	100	72.500	ENSRNOG00000049370	LOC100360750	100	72.500	Rattus_norvegicus
ENSCATG00000038799	-	100	72.500	ENSRNOG00000030374	Lsm6	100	72.500	Rattus_norvegicus
ENSCATG00000038799	-	100	72.500	ENSRBIG00000027878	LSM6	100	72.500	Rhinopithecus_bieti
ENSCATG00000038799	-	100	72.500	ENSRROG00000024868	LSM6	100	72.500	Rhinopithecus_roxellana
ENSCATG00000038799	-	100	57.500	ENSSBOG00000028103	-	100	57.500	Saimiri_boliviensis_boliviensis
ENSCATG00000038799	-	100	72.500	ENSSBOG00000021229	-	100	72.500	Saimiri_boliviensis_boliviensis
ENSCATG00000038799	-	100	73.750	ENSSFOG00015016480	lsm6	100	73.750	Scleropages_formosus
ENSCATG00000038799	-	100	72.500	ENSSMAG00000004550	lsm6	100	72.500	Scophthalmus_maximus
ENSCATG00000038799	-	100	72.500	ENSSDUG00000020459	lsm6	50	72.500	Seriola_dumerili
ENSCATG00000038799	-	100	72.000	ENSSLDG00000004136	-	62	72.000	Seriola_lalandi_dorsalis
ENSCATG00000038799	-	100	72.500	ENSSLDG00000020533	lsm6	83	72.500	Seriola_lalandi_dorsalis
ENSCATG00000038799	-	55	62.500	ENSSARG00000000689	LSM6	100	62.500	Sorex_araneus
ENSCATG00000038799	-	100	72.500	ENSSPUG00000008657	LSM6	100	72.500	Sphenodon_punctatus
ENSCATG00000038799	-	100	72.500	ENSSPAG00000003246	lsm6	100	72.500	Stegastes_partitus
ENSCATG00000038799	-	100	72.500	ENSSSCG00000035973	LSM6	100	72.500	Sus_scrofa
ENSCATG00000038799	-	100	72.500	ENSTGUG00000002663	LSM6	100	72.500	Taeniopygia_guttata
ENSCATG00000038799	-	100	72.500	ENSTRUG00000023398	lsm6	100	72.500	Takifugu_rubripes
ENSCATG00000038799	-	100	72.500	ENSTNIG00000017725	lsm6	100	72.500	Tetraodon_nigroviridis
ENSCATG00000038799	-	100	72.500	ENSTTRG00000004609	LSM6	100	72.500	Tursiops_truncatus
ENSCATG00000038799	-	80	83.607	ENSUAMG00000014213	LSM6	50	83.607	Ursus_americanus
ENSCATG00000038799	-	80	83.607	ENSUMAG00000015727	LSM6	50	83.607	Ursus_maritimus
ENSCATG00000038799	-	100	72.500	ENSVPAG00000006922	LSM6	100	72.500	Vicugna_pacos
ENSCATG00000038799	-	100	72.500	ENSVVUG00000009254	LSM6	68	72.500	Vulpes_vulpes
ENSCATG00000038799	-	100	72.500	ENSXETG00000023683	lsm6	100	72.500	Xenopus_tropicalis
ENSCATG00000038799	-	100	72.500	ENSXMAG00000009606	lsm6	100	72.500	Xiphophorus_maculatus