EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000039248 (Gene tree)
Gene ID: 105588410
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 212513 bases
Position: chrKQ009798.1:1610494-1823006
Accession: 105588410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000032501	ResIII	PF04851.15	2.2e-08	1	1
ENSCATP00000032496	ResIII	PF04851.15	1.2e-07	1	1
ENSCATP00000032494	ResIII	PF04851.15	1.2e-07	1	1
ENSCATP00000032480	ResIII	PF04851.15	1.2e-07	1	1
ENSCATP00000032483	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000056750	CHD6-202	8418	XM_012065674	ENSCATP00000032483	2712 (aa)	XP_011921064	A0A2K5N4Q1
ENSCATT00000056747	CHD6-201	10464	XM_012065672	ENSCATP00000032480	2712 (aa)	XP_011921062	A0A2K5N4Q1
ENSCATT00000056763	CHD6-204	8079	-	ENSCATP00000032496	2692 (aa)	-	A0A2K5N4Y3
ENSCATT00000056772	CHD6-206	1119	-	ENSCATP00000032505	372 (aa)	-	A0A2K5N5A3
ENSCATT00000056768	CHD6-205	1641	-	ENSCATP00000032501	546 (aa)	-	A0A2K5N4Y9
ENSCATT00000056761	CHD6-203	8106	-	ENSCATP00000032494	2701 (aa)	-	A0A2K5N4V2

Gene Model

Click here to download ENSCATG00000039248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000039248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000039248	CHD6	68	35.347	ENSCATG00000033830	HELLS	83	37.789
ENSCATG00000039248	CHD6	68	41.842	ENSCATG00000031044	CHD1L	55	42.857
ENSCATG00000039248	CHD6	75	40.048	ENSCATG00000015921	SMARCA1	50	42.287
ENSCATG00000039248	CHD6	99	72.894	ENSCATG00000020229	CHD7	71	65.157
ENSCATG00000039248	CHD6	99	72.344	ENSCATG00000004861	CHD8	70	62.647
ENSCATG00000039248	CHD6	85	39.596	ENSCATG00000031069	-	60	32.202
ENSCATG00000039248	CHD6	85	40.164	ENSCATG00000032035	CHD1	50	37.120
ENSCATG00000039248	CHD6	99	71.743	ENSCATG00000036753	CHD9	89	48.000
ENSCATG00000039248	CHD6	77	31.078	ENSCATG00000035663	SMARCAD1	57	35.907

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000039248	CHD6	100	97.865	ENSG00000124177	CHD6	100	100.000	Homo_sapiens
ENSCATG00000039248	CHD6	99	82.418	ENSAPOG00000013736	chd6	64	75.447	Acanthochromis_polyacanthus
ENSCATG00000039248	CHD6	99	93.394	ENSAMEG00000009496	CHD6	100	91.143	Ailuropoda_melanoleuca
ENSCATG00000039248	CHD6	99	82.051	ENSATEG00000005608	chd6	62	76.944	Anabas_testudineus
ENSCATG00000039248	CHD6	99	89.541	ENSAPLG00000015592	CHD6	100	72.176	Anas_platyrhynchos
ENSCATG00000039248	CHD6	99	80.926	ENSACAG00000006842	CHD6	96	73.729	Anolis_carolinensis
ENSCATG00000039248	CHD6	100	100.000	ENSANAG00000037548	CHD6	100	100.000	Aotus_nancymaae
ENSCATG00000039248	CHD6	94	86.408	ENSAMXG00000009576	chd6	77	70.061	Astyanax_mexicanus
ENSCATG00000039248	CHD6	99	93.211	ENSBTAG00000005733	CHD6	100	88.032	Bos_taurus
ENSCATG00000039248	CHD6	100	99.817	ENSCJAG00000017920	CHD6	100	99.817	Callithrix_jacchus
ENSCATG00000039248	CHD6	99	93.394	ENSCAFG00000009236	CHD6	100	91.216	Canis_familiaris
ENSCATG00000039248	CHD6	100	97.985	ENSCAFG00020012906	CHD6	100	97.985	Canis_lupus_dingo
ENSCATG00000039248	CHD6	99	93.578	ENSCHIG00000017606	CHD6	100	88.032	Capra_hircus
ENSCATG00000039248	CHD6	84	92.804	ENSTSYG00000014635	CHD6	100	92.804	Carlito_syrichta
ENSCATG00000039248	CHD6	99	93.394	ENSCPOG00000015641	CHD6	100	91.143	Cavia_porcellus
ENSCATG00000039248	CHD6	100	100.000	ENSCCAG00000036828	CHD6	100	100.000	Cebus_capucinus
ENSCATG00000039248	CHD6	99	93.211	ENSCLAG00000013743	CHD6	100	90.979	Chinchilla_lanigera
ENSCATG00000039248	CHD6	100	99.080	ENSCSAG00000013997	CHD6	100	99.080	Chlorocebus_sabaeus
ENSCATG00000039248	CHD6	99	87.156	ENSCHOG00000012647	CHD6	95	89.460	Choloepus_hoffmanni
ENSCATG00000039248	CHD6	99	89.358	ENSCPBG00000019382	CHD6	99	73.548	Chrysemys_picta_bellii
ENSCATG00000039248	CHD6	100	100.000	ENSCANG00000043435	CHD6	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000039248	CHD6	99	91.376	ENSCGRG00001002694	Chd6	100	89.269	Cricetulus_griseus_chok1gshd
ENSCATG00000039248	CHD6	100	97.253	ENSCGRG00000006749	-	100	97.253	Cricetulus_griseus_crigri
ENSCATG00000039248	CHD6	91	88.956	ENSDARG00000017244	chd6	79	73.482	Danio_rerio
ENSCATG00000039248	CHD6	99	92.844	ENSDNOG00000004176	CHD6	99	90.269	Dasypus_novemcinctus
ENSCATG00000039248	CHD6	100	98.352	ENSEASG00005023433	CHD6	100	98.352	Equus_asinus_asinus
ENSCATG00000039248	CHD6	99	93.394	ENSECAG00000011761	CHD6	100	92.497	Equus_caballus
ENSCATG00000039248	CHD6	94	85.243	ENSELUG00000012309	chd6	92	80.077	Esox_lucius
ENSCATG00000039248	CHD6	99	93.394	ENSFCAG00000003572	CHD6	100	91.621	Felis_catus
ENSCATG00000039248	CHD6	99	88.991	ENSFALG00000012563	CHD6	98	71.130	Ficedula_albicollis
ENSCATG00000039248	CHD6	99	92.661	ENSFDAG00000013791	CHD6	99	91.298	Fukomys_damarensis
ENSCATG00000039248	CHD6	89	83.197	ENSGMOG00000011715	chd6	85	70.022	Gadus_morhua
ENSCATG00000039248	CHD6	94	80.233	ENSGACG00000000037	chd6	99	54.693	Gasterosteus_aculeatus
ENSCATG00000039248	CHD6	61	94.012	ENSGAGG00000007475	-	79	94.169	Gopherus_agassizii
ENSCATG00000039248	CHD6	100	100.000	ENSGGOG00000013123	CHD6	100	100.000	Gorilla_gorilla
ENSCATG00000039248	CHD6	99	81.319	ENSHBUG00000014701	chd6	63	75.100	Haplochromis_burtoni
ENSCATG00000039248	CHD6	99	92.844	ENSHGLG00000004548	CHD6	100	91.587	Heterocephalus_glaber_female
ENSCATG00000039248	CHD6	99	92.844	ENSHGLG00100006401	CHD6	100	91.587	Heterocephalus_glaber_male
ENSCATG00000039248	CHD6	94	85.631	ENSIPUG00000003692	chd6	74	76.288	Ictalurus_punctatus
ENSCATG00000039248	CHD6	99	93.394	ENSSTOG00000013382	CHD6	100	92.135	Ictidomys_tridecemlineatus
ENSCATG00000039248	CHD6	99	84.404	ENSLACG00000010881	CHD6	86	76.964	Latimeria_chalumnae
ENSCATG00000039248	CHD6	94	86.990	ENSLOCG00000007386	chd6	84	75.362	Lepisosteus_oculatus
ENSCATG00000039248	CHD6	99	93.028	ENSLAFG00000012144	CHD6	100	91.550	Loxodonta_africana
ENSCATG00000039248	CHD6	100	100.000	ENSMFAG00000032830	CHD6	100	100.000	Macaca_fascicularis
ENSCATG00000039248	CHD6	100	100.000	ENSMMUG00000020458	CHD6	100	100.000	Macaca_mulatta
ENSCATG00000039248	CHD6	100	100.000	ENSMNEG00000040847	CHD6	100	100.000	Macaca_nemestrina
ENSCATG00000039248	CHD6	100	100.000	ENSMLEG00000031965	CHD6	100	100.000	Mandrillus_leucophaeus
ENSCATG00000039248	CHD6	99	81.685	ENSMAMG00000013111	chd6	62	76.966	Mastacembelus_armatus
ENSCATG00000039248	CHD6	99	89.011	ENSMGAG00000001121	CHD6	99	71.837	Meleagris_gallopavo
ENSCATG00000039248	CHD6	100	99.084	ENSMICG00000016641	CHD6	100	99.084	Microcebus_murinus
ENSCATG00000039248	CHD6	99	91.560	ENSMOCG00000014004	-	98	93.799	Microtus_ochrogaster
ENSCATG00000039248	CHD6	99	91.743	ENSMODG00000000720	-	99	81.304	Monodelphis_domestica
ENSCATG00000039248	CHD6	99	91.009	MGP_CAROLIEiJ_G0024604	Chd6	100	94.515	Mus_caroli
ENSCATG00000039248	CHD6	99	91.009	ENSMUSG00000057133	Chd6	100	94.430	Mus_musculus
ENSCATG00000039248	CHD6	99	91.193	MGP_PahariEiJ_G0026048	Chd6	100	94.852	Mus_pahari
ENSCATG00000039248	CHD6	99	91.009	MGP_SPRETEiJ_G0025526	Chd6	100	94.515	Mus_spretus
ENSCATG00000039248	CHD6	99	93.394	ENSMPUG00000017695	CHD6	100	89.956	Mustela_putorius_furo
ENSCATG00000039248	CHD6	99	93.028	ENSMLUG00000016247	CHD6	100	90.812	Myotis_lucifugus
ENSCATG00000039248	CHD6	99	81.550	ENSNBRG00000013839	chd6	79	73.180	Neolamprologus_brichardi
ENSCATG00000039248	CHD6	100	96.513	ENSNLEG00000006496	CHD6	100	96.513	Nomascus_leucogenys
ENSCATG00000039248	CHD6	100	87.321	ENSOPRG00000013376	-	100	87.321	Ochotona_princeps
ENSCATG00000039248	CHD6	99	81.502	ENSONIG00000000393	chd6	87	73.404	Oreochromis_niloticus
ENSCATG00000039248	CHD6	99	89.541	ENSOANG00000014347	CHD6	99	70.315	Ornithorhynchus_anatinus
ENSCATG00000039248	CHD6	99	93.578	ENSOCUG00000012394	CHD6	100	89.629	Oryctolagus_cuniculus
ENSCATG00000039248	CHD6	96	84.571	ENSORLG00020021891	chd6	99	84.571	Oryzias_latipes_hni
ENSCATG00000039248	CHD6	99	93.211	ENSOGAG00000002427	CHD6	100	91.458	Otolemur_garnettii
ENSCATG00000039248	CHD6	99	93.578	ENSOARG00000002597	CHD6	100	85.746	Ovis_aries
ENSCATG00000039248	CHD6	99	93.394	ENSPPRG00000014756	CHD6	100	91.804	Panthera_pardus
ENSCATG00000039248	CHD6	99	93.394	ENSPTIG00000011094	CHD6	100	91.694	Panthera_tigris_altaica
ENSCATG00000039248	CHD6	100	100.000	ENSPTRG00000013504	CHD6	99	100.000	Pan_troglodytes
ENSCATG00000039248	CHD6	100	99.817	ENSPANG00000025554	CHD6	100	99.817	Papio_anubis
ENSCATG00000039248	CHD6	94	86.990	ENSPKIG00000005578	chd6	79	72.361	Paramormyrops_kingsleyae
ENSCATG00000039248	CHD6	99	82.202	ENSPMGG00000014877	chd6	83	76.686	Periophthalmus_magnuspinnatus
ENSCATG00000039248	CHD6	100	97.253	ENSPEMG00000014672	-	100	97.253	Peromyscus_maniculatus_bairdii
ENSCATG00000039248	CHD6	99	91.743	ENSPCIG00000028037	CHD6	100	80.711	Phascolarctos_cinereus
ENSCATG00000039248	CHD6	99	81.319	ENSPLAG00000003128	chd6	71	72.914	Poecilia_latipinna
ENSCATG00000039248	CHD6	99	81.319	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSCATG00000039248	CHD6	100	98.013	ENSPPYG00000011016	CHD6	100	98.013	Pongo_abelii
ENSCATG00000039248	CHD6	100	99.634	ENSPCOG00000001089	CHD6	100	99.634	Propithecus_coquereli
ENSCATG00000039248	CHD6	99	81.319	ENSPNYG00000022516	chd6	78	73.910	Pundamilia_nyererei
ENSCATG00000039248	CHD6	94	86.990	ENSPNAG00000012825	chd6	79	70.265	Pygocentrus_nattereri
ENSCATG00000039248	CHD6	99	90.826	ENSRNOG00000016744	Chd6	100	87.100	Rattus_norvegicus
ENSCATG00000039248	CHD6	100	100.000	ENSSBOG00000022089	CHD6	99	100.000	Saimiri_boliviensis_boliviensis
ENSCATG00000039248	CHD6	99	91.560	ENSSHAG00000017072	CHD6	100	80.462	Sarcophilus_harrisii
ENSCATG00000039248	CHD6	94	86.990	ENSSFOG00015012920	chd6	81	73.889	Scleropages_formosus
ENSCATG00000039248	CHD6	84	99.782	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSCATG00000039248	CHD6	99	93.394	ENSSSCG00000007360	CHD6	100	91.376	Sus_scrofa
ENSCATG00000039248	CHD6	99	89.358	ENSTGUG00000003179	CHD6	99	73.467	Taeniopygia_guttata
ENSCATG00000039248	CHD6	99	80.220	ENSTNIG00000017487	chd6	100	57.467	Tetraodon_nigroviridis
ENSCATG00000039248	CHD6	99	91.376	ENSTTRG00000013438	CHD6	100	87.812	Tursiops_truncatus
ENSCATG00000039248	CHD6	100	97.985	ENSUAMG00000024036	CHD6	100	97.985	Ursus_americanus
ENSCATG00000039248	CHD6	100	97.985	ENSUMAG00000002017	CHD6	100	97.985	Ursus_maritimus
ENSCATG00000039248	CHD6	98	88.037	ENSVPAG00000007941	CHD6	95	89.459	Vicugna_pacos
ENSCATG00000039248	CHD6	99	93.394	ENSVVUG00000029164	CHD6	100	91.327	Vulpes_vulpes
ENSCATG00000039248	CHD6	99	64.037	ENSXETG00000021445	chd6	89	69.651	Xenopus_tropicalis