EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000039250 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19 kDa protein pseudogene
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 435 bases
Position: chrKQ011504.1:22980528-22980962
Accession: 105571499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000032356	SRP19	PF01922.17	1.1e-26	1	1
ENSCATP00000032358	SRP19	PF01922.17	6.6e-13	1	2
ENSCATP00000032358	SRP19	PF01922.17	6.6e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000056625	-	345	-	ENSCATP00000032358	114 (aa)	-	A0A2K5N4C7
ENSCATT00000056623	-	417	-	ENSCATP00000032356	138 (aa)	-	A0A2K5N4J7

Gene Model

Click here to download ENSCATG00000039250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000039250's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000039250	-	88	77.165	ENSCATG00000040513	-	80	76.923
ENSCATG00000039250	-	100	92.500	ENSCATG00000030502	-	100	92.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000039250	-	100	92.361	ENSG00000153037	SRP19	100	92.361	Homo_sapiens
ENSCATG00000039250	-	89	64.341	ENSAPOG00000002199	srp19	90	64.341	Acanthochromis_polyacanthus
ENSCATG00000039250	-	93	89.630	ENSAMEG00000012623	SRP19	92	89.630	Ailuropoda_melanoleuca
ENSCATG00000039250	-	89	63.566	ENSACIG00000005082	srp19	89	64.062	Amphilophus_citrinellus
ENSCATG00000039250	-	89	63.566	ENSAOCG00000002718	srp19	91	63.566	Amphiprion_ocellaris
ENSCATG00000039250	-	89	63.566	ENSAPEG00000022170	srp19	91	63.566	Amphiprion_percula
ENSCATG00000039250	-	89	65.116	ENSATEG00000012472	srp19	91	65.116	Anabas_testudineus
ENSCATG00000039250	-	78	80.531	ENSAPLG00000002624	SRP19	93	80.000	Anas_platyrhynchos
ENSCATG00000039250	-	92	75.188	ENSACAG00000007550	SRP19	92	75.373	Anolis_carolinensis
ENSCATG00000039250	-	95	73.282	ENSANAG00000030287	-	97	73.810	Aotus_nancymaae
ENSCATG00000039250	-	78	76.991	ENSANAG00000029862	-	89	79.381	Aotus_nancymaae
ENSCATG00000039250	-	93	90.370	ENSANAG00000032576	-	94	90.370	Aotus_nancymaae
ENSCATG00000039250	-	88	62.500	ENSACLG00000006259	srp19	90	62.500	Astatotilapia_calliptera
ENSCATG00000039250	-	88	64.800	ENSAMXG00000043011	srp19	90	65.079	Astyanax_mexicanus
ENSCATG00000039250	-	93	90.370	ENSBTAG00000012803	SRP19	94	90.370	Bos_taurus
ENSCATG00000039250	-	81	45.763	WBGene00018159	F37F2.2	82	45.763	Caenorhabditis_elegans
ENSCATG00000039250	-	91	74.400	ENSCJAG00000045531	-	85	69.853	Callithrix_jacchus
ENSCATG00000039250	-	93	88.889	ENSCJAG00000038676	-	93	88.288	Callithrix_jacchus
ENSCATG00000039250	-	93	91.111	ENSCAFG00000031549	SRP19	94	91.111	Canis_familiaris
ENSCATG00000039250	-	93	91.111	ENSCAFG00020014267	-	94	91.111	Canis_lupus_dingo
ENSCATG00000039250	-	91	91.667	ENSCAFG00020022437	-	99	91.667	Canis_lupus_dingo
ENSCATG00000039250	-	65	84.375	ENSCAFG00020004285	-	86	84.375	Canis_lupus_dingo
ENSCATG00000039250	-	93	90.370	ENSCHIG00000017551	SRP19	94	90.370	Capra_hircus
ENSCATG00000039250	-	93	91.111	ENSTSYG00000007875	SRP19	94	91.111	Carlito_syrichta
ENSCATG00000039250	-	99	69.930	ENSCPOG00000036806	SRP19	80	84.906	Cavia_porcellus
ENSCATG00000039250	-	91	69.173	ENSCCAG00000029821	-	66	69.173	Cebus_capucinus
ENSCATG00000039250	-	91	77.165	ENSCCAG00000023426	-	87	77.165	Cebus_capucinus
ENSCATG00000039250	-	93	90.370	ENSCCAG00000035651	-	94	90.370	Cebus_capucinus
ENSCATG00000039250	-	93	85.926	ENSCLAG00000004791	-	94	85.926	Chinchilla_lanigera
ENSCATG00000039250	-	93	80.000	ENSCLAG00000016055	-	93	80.000	Chinchilla_lanigera
ENSCATG00000039250	-	93	88.889	ENSCHOG00000013452	SRP19	94	88.889	Choloepus_hoffmanni
ENSCATG00000039250	-	89	75.969	ENSCPBG00000013903	SRP19	92	75.573	Chrysemys_picta_bellii
ENSCATG00000039250	-	93	88.148	ENSCGRG00001020510	Srp19	94	88.148	Cricetulus_griseus_chok1gshd
ENSCATG00000039250	-	66	80.198	ENSCGRG00000010716	-	89	80.198	Cricetulus_griseus_crigri
ENSCATG00000039250	-	83	78.333	ENSCGRG00000008542	-	92	78.333	Cricetulus_griseus_crigri
ENSCATG00000039250	-	88	65.625	ENSCSEG00000010039	srp19	89	66.142	Cynoglossus_semilaevis
ENSCATG00000039250	-	88	65.354	ENSCVAG00000017621	srp19	89	65.354	Cyprinodon_variegatus
ENSCATG00000039250	-	87	66.667	ENSDARG00000035699	srp19	89	66.929	Danio_rerio
ENSCATG00000039250	-	93	87.407	ENSDNOG00000013856	SRP19	94	87.407	Dasypus_novemcinctus
ENSCATG00000039250	-	66	86.598	ENSDORG00000004746	Srp19	76	86.598	Dipodomys_ordii
ENSCATG00000039250	-	79	47.826	FBgn0015298	Srp19	71	47.826	Drosophila_melanogaster
ENSCATG00000039250	-	93	86.667	ENSETEG00000017132	SRP19	94	86.667	Echinops_telfairi
ENSCATG00000039250	-	88	59.055	ENSEBUG00000006613	srp19	89	59.055	Eptatretus_burgeri
ENSCATG00000039250	-	93	89.630	ENSEASG00005015182	SRP19	94	89.630	Equus_asinus_asinus
ENSCATG00000039250	-	93	90.370	ENSEEUG00000007298	SRP19	94	90.370	Erinaceus_europaeus
ENSCATG00000039250	-	88	64.844	ENSELUG00000007958	srp19	91	65.116	Esox_lucius
ENSCATG00000039250	-	89	62.791	ENSELUG00000004594	srp19	89	63.780	Esox_lucius
ENSCATG00000039250	-	93	91.111	ENSFCAG00000025895	SRP19	94	91.111	Felis_catus
ENSCATG00000039250	-	93	86.667	ENSFDAG00000013543	SRP19	94	86.667	Fukomys_damarensis
ENSCATG00000039250	-	88	65.354	ENSFHEG00000000493	srp19	89	65.354	Fundulus_heteroclitus
ENSCATG00000039250	-	83	67.500	ENSGMOG00000003264	srp19	93	67.500	Gadus_morhua
ENSCATG00000039250	-	92	79.699	ENSGALG00000000218	SRP19	93	79.851	Gallus_gallus
ENSCATG00000039250	-	83	67.769	ENSGAFG00000015815	srp19	58	67.769	Gambusia_affinis
ENSCATG00000039250	-	88	65.354	ENSGACG00000001093	srp19	85	65.354	Gasterosteus_aculeatus
ENSCATG00000039250	-	92	75.940	ENSGAGG00000025305	SRP19	94	75.556	Gopherus_agassizii
ENSCATG00000039250	-	89	63.077	ENSHBUG00000006131	srp19	90	63.077	Haplochromis_burtoni
ENSCATG00000039250	-	93	88.148	ENSHGLG00000006075	SRP19	94	88.148	Heterocephalus_glaber_female
ENSCATG00000039250	-	93	88.148	ENSHGLG00100015859	SRP19	94	88.148	Heterocephalus_glaber_male
ENSCATG00000039250	-	88	61.719	ENSHCOG00000013231	srp19	90	61.719	Hippocampus_comes
ENSCATG00000039250	-	87	62.698	ENSIPUG00000025084	srp19	92	61.607	Ictalurus_punctatus
ENSCATG00000039250	-	93	88.148	ENSSTOG00000000348	SRP19	94	88.148	Ictidomys_tridecemlineatus
ENSCATG00000039250	-	93	88.148	ENSJJAG00000017185	Srp19	94	88.148	Jaculus_jaculus
ENSCATG00000039250	-	91	64.885	ENSKMAG00000011155	srp19	92	64.885	Kryptolebias_marmoratus
ENSCATG00000039250	-	88	65.354	ENSLBEG00000026727	srp19	89	65.354	Labrus_bergylta
ENSCATG00000039250	-	87	74.603	ENSLACG00000004459	SRP19	82	74.803	Latimeria_chalumnae
ENSCATG00000039250	-	88	67.188	ENSLOCG00000010302	srp19	91	66.923	Lepisosteus_oculatus
ENSCATG00000039250	-	93	88.148	ENSLAFG00000002564	SRP19	94	88.148	Loxodonta_africana
ENSCATG00000039250	-	100	94.737	ENSMFAG00000000554	-	100	94.737	Macaca_fascicularis
ENSCATG00000039250	-	82	71.681	ENSMFAG00000040055	-	90	72.174	Macaca_fascicularis
ENSCATG00000039250	-	100	94.203	ENSMMUG00000049186	-	100	94.203	Macaca_mulatta
ENSCATG00000039250	-	85	79.675	ENSMMUG00000032515	-	92	80.000	Macaca_mulatta
ENSCATG00000039250	-	100	93.056	ENSMNEG00000038714	SRP19	100	93.056	Macaca_nemestrina
ENSCATG00000039250	-	82	70.796	ENSMNEG00000040117	-	90	71.304	Macaca_nemestrina
ENSCATG00000039250	-	89	64.341	ENSMAMG00000018346	srp19	90	64.341	Mastacembelus_armatus
ENSCATG00000039250	-	89	63.077	ENSMZEG00005001765	srp19	90	63.077	Maylandia_zebra
ENSCATG00000039250	-	83	80.833	ENSMGAG00000006762	SRP19	93	80.328	Meleagris_gallopavo
ENSCATG00000039250	-	66	79.381	ENSMICG00000049202	-	91	80.198	Microcebus_murinus
ENSCATG00000039250	-	93	89.630	ENSMICG00000000399	SRP19	94	89.630	Microcebus_murinus
ENSCATG00000039250	-	93	88.889	ENSMOCG00000006534	Srp19	94	88.889	Microtus_ochrogaster
ENSCATG00000039250	-	66	85.567	ENSMOCG00000010532	-	89	85.567	Microtus_ochrogaster
ENSCATG00000039250	-	92	64.662	ENSMMOG00000010417	srp19	86	64.662	Mola_mola
ENSCATG00000039250	-	89	85.271	ENSMODG00000013278	SRP19	92	84.733	Monodelphis_domestica
ENSCATG00000039250	-	88	66.929	ENSMALG00000003858	srp19	89	66.929	Monopterus_albus
ENSCATG00000039250	-	93	89.630	MGP_CAROLIEiJ_G0022086	Srp19	98	97.436	Mus_caroli
ENSCATG00000039250	-	93	89.630	ENSMUSG00000014504	Srp19	98	97.436	Mus_musculus
ENSCATG00000039250	-	93	88.889	MGP_PahariEiJ_G0018820	Srp19	98	94.872	Mus_pahari
ENSCATG00000039250	-	93	89.630	MGP_SPRETEiJ_G0022998	Srp19	98	97.436	Mus_spretus
ENSCATG00000039250	-	93	90.370	ENSMPUG00000012695	SRP19	92	90.370	Mustela_putorius_furo
ENSCATG00000039250	-	93	89.630	ENSMLUG00000014793	-	94	89.630	Myotis_lucifugus
ENSCATG00000039250	-	86	84.677	ENSMLUG00000024549	-	90	84.800	Myotis_lucifugus
ENSCATG00000039250	-	93	88.148	ENSNGAG00000003440	-	94	88.148	Nannospalax_galili
ENSCATG00000039250	-	90	80.000	ENSNGAG00000014524	-	100	80.000	Nannospalax_galili
ENSCATG00000039250	-	93	77.778	ENSNLEG00000035364	-	94	77.778	Nomascus_leucogenys
ENSCATG00000039250	-	82	87.395	ENSMEUG00000012529	SRP19	93	86.777	Notamacropus_eugenii
ENSCATG00000039250	-	80	87.179	ENSOPRG00000010549	SRP19	93	85.950	Ochotona_princeps
ENSCATG00000039250	-	91	82.443	ENSODEG00000019119	-	94	82.222	Octodon_degus
ENSCATG00000039250	-	91	76.000	ENSODEG00000013862	-	94	76.744	Octodon_degus
ENSCATG00000039250	-	66	82.474	ENSODEG00000005538	-	85	82.474	Octodon_degus
ENSCATG00000039250	-	89	62.016	ENSONIG00000000542	srp19	90	62.500	Oreochromis_niloticus
ENSCATG00000039250	-	87	76.190	ENSOANG00000011139	SRP19	73	76.378	Ornithorhynchus_anatinus
ENSCATG00000039250	-	93	87.500	ENSOCUG00000015639	SRP19	94	87.500	Oryctolagus_cuniculus
ENSCATG00000039250	-	89	62.791	ENSORLG00000028267	srp19	91	62.791	Oryzias_latipes
ENSCATG00000039250	-	89	62.791	ENSORLG00020015201	srp19	91	62.791	Oryzias_latipes_hni
ENSCATG00000039250	-	89	62.791	ENSORLG00015007525	srp19	91	62.791	Oryzias_latipes_hsok
ENSCATG00000039250	-	89	64.341	ENSOMEG00000009178	srp19	91	64.341	Oryzias_melastigma
ENSCATG00000039250	-	93	88.889	ENSOGAG00000008579	SRP19	94	88.889	Otolemur_garnettii
ENSCATG00000039250	-	93	89.630	ENSOARG00000016066	SRP19	94	89.630	Ovis_aries
ENSCATG00000039250	-	100	92.361	ENSPPAG00000037062	SRP19	100	92.361	Pan_paniscus
ENSCATG00000039250	-	93	91.111	ENSPPRG00000015591	SRP19	94	91.111	Panthera_pardus
ENSCATG00000039250	-	93	91.111	ENSPTIG00000021474	SRP19	94	91.111	Panthera_tigris_altaica
ENSCATG00000039250	-	100	92.361	ENSPTRG00000017136	SRP19	100	92.361	Pan_troglodytes
ENSCATG00000039250	-	100	97.826	ENSPANG00000034740	-	100	97.826	Papio_anubis
ENSCATG00000039250	-	100	93.056	ENSPANG00000004370	-	100	93.056	Papio_anubis
ENSCATG00000039250	-	89	63.566	ENSPKIG00000018671	srp19	91	63.566	Paramormyrops_kingsleyae
ENSCATG00000039250	-	83	78.333	ENSPSIG00000013811	SRP19	93	77.869	Pelodiscus_sinensis
ENSCATG00000039250	-	89	64.341	ENSPMGG00000015313	srp19	91	64.341	Periophthalmus_magnuspinnatus
ENSCATG00000039250	-	93	85.185	ENSPEMG00000004412	-	93	85.185	Peromyscus_maniculatus_bairdii
ENSCATG00000039250	-	90	56.923	ENSPMAG00000002685	srp19	91	57.364	Petromyzon_marinus
ENSCATG00000039250	-	89	86.047	ENSPCIG00000010250	SRP19	91	85.496	Phascolarctos_cinereus
ENSCATG00000039250	-	88	65.354	ENSPFOG00000015887	srp19	89	65.354	Poecilia_formosa
ENSCATG00000039250	-	88	65.354	ENSPLAG00000007784	srp19	89	65.354	Poecilia_latipinna
ENSCATG00000039250	-	88	64.567	ENSPMEG00000003056	srp19	89	64.567	Poecilia_mexicana
ENSCATG00000039250	-	88	65.354	ENSPREG00000017307	srp19	89	65.354	Poecilia_reticulata
ENSCATG00000039250	-	100	92.361	ENSPPYG00000029584	SRP19	99	92.361	Pongo_abelii
ENSCATG00000039250	-	93	67.407	ENSPCAG00000000228	SRP19	94	67.407	Procavia_capensis
ENSCATG00000039250	-	93	90.370	ENSPCOG00000023239	SRP19	94	90.370	Propithecus_coquereli
ENSCATG00000039250	-	93	90.370	ENSPVAG00000004895	SRP19	94	90.370	Pteropus_vampyrus
ENSCATG00000039250	-	87	61.905	ENSPNAG00000009392	srp19	88	63.333	Pygocentrus_nattereri
ENSCATG00000039250	-	93	88.889	ENSRNOG00000020204	Srp19	94	88.889	Rattus_norvegicus
ENSCATG00000039250	-	90	93.204	ENSRBIG00000040440	-	91	93.269	Rhinopithecus_bieti
ENSCATG00000039250	-	50	82.667	ENSRBIG00000031651	-	83	82.667	Rhinopithecus_bieti
ENSCATG00000039250	-	100	93.056	ENSRBIG00000015627	-	100	93.056	Rhinopithecus_bieti
ENSCATG00000039250	-	86	72.034	ENSRROG00000037316	-	92	72.650	Rhinopithecus_roxellana
ENSCATG00000039250	-	90	93.204	ENSRROG00000037054	-	92	93.269	Rhinopithecus_roxellana
ENSCATG00000039250	-	93	67.939	ENSSBOG00000032685	-	89	74.737	Saimiri_boliviensis_boliviensis
ENSCATG00000039250	-	93	90.370	ENSSBOG00000028071	-	94	90.370	Saimiri_boliviensis_boliviensis
ENSCATG00000039250	-	89	65.891	ENSSFOG00015022139	srp19	91	65.891	Scleropages_formosus
ENSCATG00000039250	-	89	62.791	ENSSMAG00000016803	srp19	90	62.791	Scophthalmus_maximus
ENSCATG00000039250	-	89	57.143	ENSSDUG00000012930	srp19	91	57.143	Seriola_dumerili
ENSCATG00000039250	-	79	42.373	ENSSLDG00000021916	-	81	42.373	Seriola_lalandi_dorsalis
ENSCATG00000039250	-	93	87.407	ENSSARG00000000615	SRP19	94	87.407	Sorex_araneus
ENSCATG00000039250	-	85	82.114	ENSSPUG00000015769	SRP19	90	82.443	Sphenodon_punctatus
ENSCATG00000039250	-	93	91.111	ENSSSCG00000026230	SRP19	94	91.111	Sus_scrofa
ENSCATG00000039250	-	85	79.675	ENSTGUG00000001019	SRP19	92	78.358	Taeniopygia_guttata
ENSCATG00000039250	-	88	66.154	ENSTRUG00000023119	srp19	90	66.154	Takifugu_rubripes
ENSCATG00000039250	-	89	64.341	ENSTNIG00000018880	srp19	91	64.341	Tetraodon_nigroviridis
ENSCATG00000039250	-	93	89.630	ENSTTRG00000001690	SRP19	94	89.630	Tursiops_truncatus
ENSCATG00000039250	-	91	90.076	ENSUAMG00000000111	SRP19	94	90.370	Ursus_americanus
ENSCATG00000039250	-	93	90.370	ENSUMAG00000016997	SRP19	94	90.370	Ursus_maritimus
ENSCATG00000039250	-	93	90.370	ENSVPAG00000006001	SRP19	94	90.370	Vicugna_pacos
ENSCATG00000039250	-	66	87.629	ENSVVUG00000012423	SRP19	86	87.629	Vulpes_vulpes
ENSCATG00000039250	-	83	66.942	ENSXETG00000011993	srp19	85	66.942	Xenopus_tropicalis
ENSCATG00000039250	-	81	55.932	ENSXCOG00000012530	srp19	82	55.932	Xiphophorus_couchianus
ENSCATG00000039250	-	91	65.152	ENSXMAG00000029788	srp19	89	66.142	Xiphophorus_maculatus