EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000039530 (Gene tree)
Gene ID: 105590591
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 227481 bases
Position: chrKQ010004.1:1547782-1775262
Accession: 105590591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000033050	S1	PF00575.23	6.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000057321	SRBD1-202	3606	XM_012070296	ENSCATP00000033050	994 (aa)	XP_011925686	A0A2K5N6V2
ENSCATT00000057317	SRBD1-201	3043	-	ENSCATP00000033046	968 (aa)	-	A0A2K5N6I6

Gene Model

Click here to download ENSCATG00000039530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000039530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000039530	SRBD1	100	96.583	ENSG00000068784	SRBD1	100	96.583	Homo_sapiens
ENSCATG00000039530	SRBD1	100	51.302	ENSAPOG00000005103	si:ch211-117n7.8	94	53.429	Acanthochromis_polyacanthus
ENSCATG00000039530	SRBD1	100	91.558	ENSAMEG00000005993	SRBD1	100	91.558	Ailuropoda_melanoleuca
ENSCATG00000039530	SRBD1	83	57.788	ENSACIG00000009875	si:ch211-117n7.8	97	52.863	Amphilophus_citrinellus
ENSCATG00000039530	SRBD1	98	52.104	ENSAOCG00000024718	si:ch211-117n7.8	94	53.472	Amphiprion_ocellaris
ENSCATG00000039530	SRBD1	84	58.205	ENSAPEG00000002645	si:ch211-117n7.8	87	58.205	Amphiprion_percula
ENSCATG00000039530	SRBD1	99	51.677	ENSATEG00000010844	si:ch211-117n7.8	97	52.487	Anabas_testudineus
ENSCATG00000039530	SRBD1	100	70.871	ENSAPLG00000006313	SRBD1	100	70.971	Anas_platyrhynchos
ENSCATG00000039530	SRBD1	100	95.070	ENSANAG00000025573	SRBD1	100	95.070	Aotus_nancymaae
ENSCATG00000039530	SRBD1	95	53.237	ENSACLG00000024219	si:ch211-117n7.8	94	52.821	Astatotilapia_calliptera
ENSCATG00000039530	SRBD1	89	58.509	ENSAMXG00000004294	SRBD1	93	56.269	Astyanax_mexicanus
ENSCATG00000039530	SRBD1	100	89.157	ENSBTAG00000007508	SRBD1	97	89.859	Bos_taurus
ENSCATG00000039530	SRBD1	73	30.013	WBGene00022830	ZK973.1	91	30.412	Caenorhabditis_elegans
ENSCATG00000039530	SRBD1	100	94.366	ENSCJAG00000000727	SRBD1	100	94.366	Callithrix_jacchus
ENSCATG00000039530	SRBD1	100	90.873	ENSCAFG00000002554	SRBD1	100	90.873	Canis_familiaris
ENSCATG00000039530	SRBD1	100	87.952	ENSCAFG00020026284	SRBD1	99	90.708	Canis_lupus_dingo
ENSCATG00000039530	SRBD1	100	89.157	ENSCHIG00000016535	SRBD1	98	89.859	Capra_hircus
ENSCATG00000039530	SRBD1	100	91.483	ENSTSYG00000012797	SRBD1	100	91.483	Carlito_syrichta
ENSCATG00000039530	SRBD1	100	87.952	ENSCPOG00000004773	SRBD1	100	87.952	Cavia_porcellus
ENSCATG00000039530	SRBD1	100	94.970	ENSCCAG00000025589	SRBD1	100	94.970	Cebus_capucinus
ENSCATG00000039530	SRBD1	100	88.878	ENSCLAG00000008623	SRBD1	100	88.878	Chinchilla_lanigera
ENSCATG00000039530	SRBD1	100	99.296	ENSCSAG00000013350	SRBD1	100	99.296	Chlorocebus_sabaeus
ENSCATG00000039530	SRBD1	93	77.557	ENSCHOG00000003805	SRBD1	93	77.557	Choloepus_hoffmanni
ENSCATG00000039530	SRBD1	100	73.453	ENSCPBG00000005677	SRBD1	100	73.227	Chrysemys_picta_bellii
ENSCATG00000039530	SRBD1	79	42.366	ENSCING00000005950	-	99	42.366	Ciona_intestinalis
ENSCATG00000039530	SRBD1	79	42.695	ENSCSAVG00000000861	-	99	42.695	Ciona_savignyi
ENSCATG00000039530	SRBD1	99	98.589	ENSCANG00000016307	SRBD1	99	98.589	Colobus_angolensis_palliatus
ENSCATG00000039530	SRBD1	100	85.070	ENSCGRG00001000513	Srbd1	100	85.070	Cricetulus_griseus_chok1gshd
ENSCATG00000039530	SRBD1	100	85.070	ENSCGRG00000002283	Srbd1	100	85.070	Cricetulus_griseus_crigri
ENSCATG00000039530	SRBD1	97	51.414	ENSCSEG00000000856	si:ch211-117n7.8	97	51.472	Cynoglossus_semilaevis
ENSCATG00000039530	SRBD1	84	56.722	ENSCVAG00000020212	si:ch211-117n7.8	89	56.722	Cyprinodon_variegatus
ENSCATG00000039530	SRBD1	100	90.090	ENSDNOG00000018686	SRBD1	100	90.090	Dasypus_novemcinctus
ENSCATG00000039530	SRBD1	100	86.834	ENSDORG00000010468	Srbd1	100	86.834	Dipodomys_ordii
ENSCATG00000039530	SRBD1	94	34.312	FBgn0051156	CG31156	98	34.514	Drosophila_melanogaster
ENSCATG00000039530	SRBD1	89	83.214	ENSETEG00000000739	SRBD1	91	83.214	Echinops_telfairi
ENSCATG00000039530	SRBD1	73	49.116	ENSEBUG00000008902	si:ch211-117n7.8	96	49.116	Eptatretus_burgeri
ENSCATG00000039530	SRBD1	100	89.157	ENSEASG00005003132	SRBD1	97	95.541	Equus_asinus_asinus
ENSCATG00000039530	SRBD1	100	92.269	ENSECAG00000013865	SRBD1	98	92.269	Equus_caballus
ENSCATG00000039530	SRBD1	97	54.213	ENSELUG00000012592	si:ch211-117n7.8	92	54.490	Esox_lucius
ENSCATG00000039530	SRBD1	100	91.968	ENSFCAG00000005101	SRBD1	100	91.968	Felis_catus
ENSCATG00000039530	SRBD1	100	68.938	ENSFALG00000012966	SRBD1	100	68.762	Ficedula_albicollis
ENSCATG00000039530	SRBD1	99	86.687	ENSFDAG00000016670	SRBD1	98	87.734	Fukomys_damarensis
ENSCATG00000039530	SRBD1	95	52.784	ENSFHEG00000019480	si:ch211-117n7.8	93	52.784	Fundulus_heteroclitus
ENSCATG00000039530	SRBD1	50	52.477	ENSGMOG00000018010	-	100	52.477	Gadus_morhua
ENSCATG00000039530	SRBD1	100	70.712	ENSGALG00000009990	SRBD1	100	70.441	Gallus_gallus
ENSCATG00000039530	SRBD1	98	50.951	ENSGAFG00000019664	si:ch211-117n7.8	97	51.365	Gambusia_affinis
ENSCATG00000039530	SRBD1	62	60.640	ENSGACG00000010794	si:ch211-117n7.8	100	60.800	Gasterosteus_aculeatus
ENSCATG00000039530	SRBD1	84	81.107	ENSGAGG00000006166	SRBD1	99	81.107	Gopherus_agassizii
ENSCATG00000039530	SRBD1	97	97.110	ENSGGOG00000005910	SRBD1	100	97.107	Gorilla_gorilla
ENSCATG00000039530	SRBD1	90	48.276	ENSHBUG00000013207	si:ch211-117n7.8	96	46.842	Haplochromis_burtoni
ENSCATG00000039530	SRBD1	99	88.721	ENSHGLG00000018153	-	99	88.721	Heterocephalus_glaber_female
ENSCATG00000039530	SRBD1	99	88.520	ENSHGLG00100015183	-	99	88.520	Heterocephalus_glaber_male
ENSCATG00000039530	SRBD1	96	56.198	ENSIPUG00000009661	srbd1	95	56.276	Ictalurus_punctatus
ENSCATG00000039530	SRBD1	100	90.854	ENSSTOG00000005898	SRBD1	100	90.854	Ictidomys_tridecemlineatus
ENSCATG00000039530	SRBD1	100	81.043	ENSJJAG00000022244	Srbd1	100	81.043	Jaculus_jaculus
ENSCATG00000039530	SRBD1	98	51.996	ENSKMAG00000003473	si:ch211-117n7.8	97	52.275	Kryptolebias_marmoratus
ENSCATG00000039530	SRBD1	98	51.734	ENSLBEG00000027518	si:ch211-117n7.8	97	51.600	Labrus_bergylta
ENSCATG00000039530	SRBD1	85	70.686	ENSLACG00000009790	SRBD1	100	70.686	Latimeria_chalumnae
ENSCATG00000039530	SRBD1	100	58.234	ENSLOCG00000016360	si:ch211-117n7.8	99	58.234	Lepisosteus_oculatus
ENSCATG00000039530	SRBD1	100	99.497	ENSMFAG00000042026	SRBD1	100	99.497	Macaca_fascicularis
ENSCATG00000039530	SRBD1	100	99.195	ENSMMUG00000003490	SRBD1	100	99.195	Macaca_mulatta
ENSCATG00000039530	SRBD1	100	96.781	ENSMNEG00000034701	SRBD1	100	96.781	Macaca_nemestrina
ENSCATG00000039530	SRBD1	100	99.497	ENSMLEG00000000745	SRBD1	100	99.497	Mandrillus_leucophaeus
ENSCATG00000039530	SRBD1	82	56.611	ENSMAMG00000021921	si:ch211-117n7.8	87	55.114	Mastacembelus_armatus
ENSCATG00000039530	SRBD1	96	53.128	ENSMZEG00005027369	si:ch211-117n7.8	94	52.821	Maylandia_zebra
ENSCATG00000039530	SRBD1	80	75.313	ENSMGAG00000010273	SRBD1	100	75.313	Meleagris_gallopavo
ENSCATG00000039530	SRBD1	79	86.470	ENSMAUG00000013916	Srbd1	99	84.005	Mesocricetus_auratus
ENSCATG00000039530	SRBD1	100	92.871	ENSMICG00000007835	SRBD1	100	92.871	Microcebus_murinus
ENSCATG00000039530	SRBD1	100	84.538	ENSMOCG00000018716	Srbd1	100	84.538	Microtus_ochrogaster
ENSCATG00000039530	SRBD1	84	56.604	ENSMMOG00000007507	si:ch211-117n7.8	87	56.604	Mola_mola
ENSCATG00000039530	SRBD1	99	51.024	ENSMALG00000001562	si:ch211-117n7.8	93	52.464	Monopterus_albus
ENSCATG00000039530	SRBD1	100	82.412	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.665	Mus_caroli
ENSCATG00000039530	SRBD1	100	82.513	ENSMUSG00000024135	Srbd1	99	83.673	Mus_musculus
ENSCATG00000039530	SRBD1	100	81.608	MGP_PahariEiJ_G0020924	Srbd1	100	81.608	Mus_pahari
ENSCATG00000039530	SRBD1	100	82.613	MGP_SPRETEiJ_G0022850	Srbd1	100	82.613	Mus_spretus
ENSCATG00000039530	SRBD1	100	87.538	ENSMLUG00000007039	SRBD1	100	87.538	Myotis_lucifugus
ENSCATG00000039530	SRBD1	100	83.773	ENSNGAG00000011893	Srbd1	100	83.382	Nannospalax_galili
ENSCATG00000039530	SRBD1	98	50.150	ENSNBRG00000012873	si:ch211-117n7.8	96	51.670	Neolamprologus_brichardi
ENSCATG00000039530	SRBD1	100	97.487	ENSNLEG00000016877	SRBD1	100	97.487	Nomascus_leucogenys
ENSCATG00000039530	SRBD1	100	85.226	ENSODEG00000012095	SRBD1	100	85.226	Octodon_degus
ENSCATG00000039530	SRBD1	96	53.032	ENSONIG00000000945	si:ch211-117n7.8	99	58.173	Oreochromis_niloticus
ENSCATG00000039530	SRBD1	100	91.968	ENSOCUG00000015385	SRBD1	100	91.968	Oryctolagus_cuniculus
ENSCATG00000039530	SRBD1	85	53.272	ENSORLG00000004427	si:ch211-117n7.8	84	53.272	Oryzias_latipes
ENSCATG00000039530	SRBD1	98	51.717	ENSORLG00020012792	si:ch211-117n7.8	84	56.537	Oryzias_latipes_hni
ENSCATG00000039530	SRBD1	86	55.913	ENSORLG00015018598	si:ch211-117n7.8	84	55.913	Oryzias_latipes_hsok
ENSCATG00000039530	SRBD1	86	55.324	ENSOMEG00000012229	si:ch211-117n7.8	83	55.556	Oryzias_melastigma
ENSCATG00000039530	SRBD1	100	85.141	ENSOGAG00000001076	SRBD1	100	85.141	Otolemur_garnettii
ENSCATG00000039530	SRBD1	100	84.578	ENSOARG00000005958	SRBD1	100	85.257	Ovis_aries
ENSCATG00000039530	SRBD1	100	96.985	ENSPPAG00000038442	SRBD1	100	96.985	Pan_paniscus
ENSCATG00000039530	SRBD1	100	91.960	ENSPPRG00000003449	SRBD1	100	91.960	Panthera_pardus
ENSCATG00000039530	SRBD1	100	92.060	ENSPTIG00000012495	SRBD1	100	92.060	Panthera_tigris_altaica
ENSCATG00000039530	SRBD1	100	96.985	ENSPTRG00000011889	SRBD1	100	96.985	Pan_troglodytes
ENSCATG00000039530	SRBD1	100	99.296	ENSPANG00000008063	SRBD1	100	99.296	Papio_anubis
ENSCATG00000039530	SRBD1	96	54.489	ENSPKIG00000021973	si:ch211-117n7.8	97	54.309	Paramormyrops_kingsleyae
ENSCATG00000039530	SRBD1	100	72.563	ENSPSIG00000008992	SRBD1	100	72.965	Pelodiscus_sinensis
ENSCATG00000039530	SRBD1	89	53.012	ENSPMGG00000013348	si:ch211-117n7.8	98	51.332	Periophthalmus_magnuspinnatus
ENSCATG00000039530	SRBD1	100	83.219	ENSPEMG00000020684	Srbd1	100	83.219	Peromyscus_maniculatus_bairdii
ENSCATG00000039530	SRBD1	98	51.642	ENSPFOG00000010650	si:ch211-117n7.8	97	51.972	Poecilia_formosa
ENSCATG00000039530	SRBD1	98	51.642	ENSPLAG00000002141	si:ch211-117n7.8	97	51.972	Poecilia_latipinna
ENSCATG00000039530	SRBD1	98	51.741	ENSPMEG00000018537	si:ch211-117n7.8	97	52.073	Poecilia_mexicana
ENSCATG00000039530	SRBD1	84	57.311	ENSPREG00000003258	si:ch211-117n7.8	85	57.311	Poecilia_reticulata
ENSCATG00000039530	SRBD1	100	89.194	ENSPPYG00000012444	SRBD1	99	89.194	Pongo_abelii
ENSCATG00000039530	SRBD1	82	82.095	ENSPCAG00000005629	SRBD1	85	82.095	Procavia_capensis
ENSCATG00000039530	SRBD1	100	80.781	ENSPCOG00000017669	SRBD1	100	80.781	Propithecus_coquereli
ENSCATG00000039530	SRBD1	100	81.709	ENSPVAG00000001782	SRBD1	100	81.709	Pteropus_vampyrus
ENSCATG00000039530	SRBD1	90	51.938	ENSPNYG00000000508	si:ch211-117n7.8	96	50.314	Pundamilia_nyererei
ENSCATG00000039530	SRBD1	96	56.982	ENSPNAG00000013492	SRBD1	95	56.982	Pygocentrus_nattereri
ENSCATG00000039530	SRBD1	100	81.124	ENSRNOG00000014720	Srbd1	99	81.827	Rattus_norvegicus
ENSCATG00000039530	SRBD1	99	98.589	ENSRBIG00000033486	SRBD1	99	98.589	Rhinopithecus_bieti
ENSCATG00000039530	SRBD1	99	98.589	ENSRROG00000041599	SRBD1	99	98.589	Rhinopithecus_roxellana
ENSCATG00000039530	SRBD1	100	94.769	ENSSBOG00000024982	SRBD1	100	94.769	Saimiri_boliviensis_boliviensis
ENSCATG00000039530	SRBD1	87	58.087	ENSSFOG00015001128	si:ch211-117n7.8	93	58.087	Scleropages_formosus
ENSCATG00000039530	SRBD1	98	51.476	ENSSMAG00000018256	si:ch211-117n7.8	82	57.529	Scophthalmus_maximus
ENSCATG00000039530	SRBD1	86	56.732	ENSSLDG00000023189	si:ch211-117n7.8	84	56.732	Seriola_lalandi_dorsalis
ENSCATG00000039530	SRBD1	100	78.794	ENSSARG00000009740	SRBD1	100	78.794	Sorex_araneus
ENSCATG00000039530	SRBD1	85	77.187	ENSSPUG00000010475	SRBD1	94	77.187	Sphenodon_punctatus
ENSCATG00000039530	SRBD1	84	54.994	ENSSPAG00000008092	-	95	51.177	Stegastes_partitus
ENSCATG00000039530	SRBD1	100	90.060	ENSSSCG00000008445	SRBD1	98	90.663	Sus_scrofa
ENSCATG00000039530	SRBD1	84	77.470	ENSTGUG00000003878	SRBD1	100	77.470	Taeniopygia_guttata
ENSCATG00000039530	SRBD1	99	50.528	ENSTRUG00000007080	si:ch211-117n7.8	92	57.126	Takifugu_rubripes
ENSCATG00000039530	SRBD1	99	50.633	ENSTNIG00000007464	si:ch211-117n7.8	97	51.004	Tetraodon_nigroviridis
ENSCATG00000039530	SRBD1	83	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSCATG00000039530	SRBD1	94	92.166	ENSTTRG00000011871	SRBD1	94	92.166	Tursiops_truncatus
ENSCATG00000039530	SRBD1	100	91.265	ENSUAMG00000008126	SRBD1	97	95.652	Ursus_americanus
ENSCATG00000039530	SRBD1	100	91.265	ENSUMAG00000012902	SRBD1	98	91.265	Ursus_maritimus
ENSCATG00000039530	SRBD1	91	92.282	ENSVPAG00000006825	SRBD1	100	92.282	Vicugna_pacos
ENSCATG00000039530	SRBD1	100	90.261	ENSVVUG00000005389	SRBD1	100	90.863	Vulpes_vulpes
ENSCATG00000039530	SRBD1	100	53.026	ENSXETG00000002760	srbd1	100	53.026	Xenopus_tropicalis
ENSCATG00000039530	SRBD1	98	51.241	ENSXMAG00000016861	si:ch211-117n7.8	97	51.564	Xiphophorus_maculatus