EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000039850 (Gene tree)
Gene ID: 105601556
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 12288 bases
Position: chrKQ011503.1:3655218-3667505
Accession: 105601556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000033774	zf-CCCH	PF00642.24	9.9e-07	1	1
ENSCATP00000033774	TRM	PF02005.16	5.2e-150	1	1
ENSCATP00000033774	Met_10	PF02475.16	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000058048	TRMT1-201	2197	XM_012094082	ENSCATP00000033774	661 (aa)	XP_011949472	A0A2K5N8H7

Gene Model

Click here to download ENSCATG00000039850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000039850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000039850	TRMT1	87	76.986	ENSCATG00000038220	-	99	76.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000039850	TRMT1	97	96.256	ENSG00000104907	TRMT1	100	96.859	Homo_sapiens
ENSCATG00000039850	TRMT1	100	87.160	ENSAMEG00000012598	TRMT1	99	87.160	Ailuropoda_melanoleuca
ENSCATG00000039850	TRMT1	87	59.511	ENSACIG00000018680	trmt1	88	59.511	Amphilophus_citrinellus
ENSCATG00000039850	TRMT1	87	66.146	ENSAOCG00000006781	trmt1	86	66.146	Amphiprion_ocellaris
ENSCATG00000039850	TRMT1	87	66.090	ENSAPEG00000007712	trmt1	86	66.090	Amphiprion_percula
ENSCATG00000039850	TRMT1	87	68.237	ENSATEG00000001872	trmt1	84	68.237	Anabas_testudineus
ENSCATG00000039850	TRMT1	89	67.687	ENSACAG00000003825	TRMT1	94	67.687	Anolis_carolinensis
ENSCATG00000039850	TRMT1	98	90.046	ENSANAG00000023016	TRMT1	99	92.382	Aotus_nancymaae
ENSCATG00000039850	TRMT1	86	64.974	ENSACLG00000010073	trmt1	92	64.974	Astatotilapia_calliptera
ENSCATG00000039850	TRMT1	87	68.166	ENSAMXG00000012026	trmt1	85	68.166	Astyanax_mexicanus
ENSCATG00000039850	TRMT1	100	87.009	ENSBTAG00000019325	TRMT1	94	87.009	Bos_taurus
ENSCATG00000039850	TRMT1	80	40.149	WBGene00006613	trm-1	96	40.149	Caenorhabditis_elegans
ENSCATG00000039850	TRMT1	98	89.676	ENSCJAG00000004566	TRMT1	99	89.676	Callithrix_jacchus
ENSCATG00000039850	TRMT1	100	88.973	ENSCAFG00000017070	TRMT1	100	90.110	Canis_familiaris
ENSCATG00000039850	TRMT1	99	88.092	ENSCAFG00020005397	TRMT1	100	85.498	Canis_lupus_dingo
ENSCATG00000039850	TRMT1	100	86.878	ENSCHIG00000013569	TRMT1	100	86.878	Capra_hircus
ENSCATG00000039850	TRMT1	97	84.627	ENSTSYG00000003207	TRMT1	99	84.475	Carlito_syrichta
ENSCATG00000039850	TRMT1	85	81.105	ENSCAPG00000003355	TRMT1	98	81.105	Cavia_aperea
ENSCATG00000039850	TRMT1	99	82.695	ENSCPOG00000011754	TRMT1	99	82.695	Cavia_porcellus
ENSCATG00000039850	TRMT1	98	86.943	ENSCCAG00000022263	TRMT1	99	91.057	Cebus_capucinus
ENSCATG00000039850	TRMT1	98	86.420	ENSCLAG00000015295	TRMT1	96	86.420	Chinchilla_lanigera
ENSCATG00000039850	TRMT1	80	99.057	ENSCSAG00000006500	TRMT1	100	99.057	Chlorocebus_sabaeus
ENSCATG00000039850	TRMT1	94	66.981	ENSCPBG00000023866	TRMT1	94	66.981	Chrysemys_picta_bellii
ENSCATG00000039850	TRMT1	83	46.140	ENSCING00000002884	-	98	46.140	Ciona_intestinalis
ENSCATG00000039850	TRMT1	83	45.668	ENSCSAVG00000010927	-	100	45.539	Ciona_savignyi
ENSCATG00000039850	TRMT1	98	81.164	ENSCANG00000040631	TRMT1	99	81.164	Colobus_angolensis_palliatus
ENSCATG00000039850	TRMT1	95	73.163	ENSCANG00000031650	-	98	73.239	Colobus_angolensis_palliatus
ENSCATG00000039850	TRMT1	100	83.008	ENSCGRG00001022594	Trmt1	100	83.008	Cricetulus_griseus_chok1gshd
ENSCATG00000039850	TRMT1	100	83.008	ENSCGRG00000017732	Trmt1	100	83.008	Cricetulus_griseus_crigri
ENSCATG00000039850	TRMT1	86	66.783	ENSCSEG00000001643	trmt1	84	68.677	Cynoglossus_semilaevis
ENSCATG00000039850	TRMT1	90	66.000	ENSCVAG00000011886	trmt1	89	66.000	Cyprinodon_variegatus
ENSCATG00000039850	TRMT1	86	66.724	ENSDARG00000010978	trmt1	85	66.897	Danio_rerio
ENSCATG00000039850	TRMT1	84	62.143	ENSDNOG00000048240	-	95	62.143	Dasypus_novemcinctus
ENSCATG00000039850	TRMT1	99	84.170	ENSDORG00000014298	Trmt1	99	84.170	Dipodomys_ordii
ENSCATG00000039850	TRMT1	77	48.069	FBgn0032430	CG6388	87	48.069	Drosophila_melanogaster
ENSCATG00000039850	TRMT1	55	82.414	ENSETEG00000015483	-	55	82.414	Echinops_telfairi
ENSCATG00000039850	TRMT1	78	53.411	ENSEBUG00000003449	trmt1	74	53.488	Eptatretus_burgeri
ENSCATG00000039850	TRMT1	94	87.981	ENSEASG00005004050	TRMT1	100	87.598	Equus_asinus_asinus
ENSCATG00000039850	TRMT1	94	88.301	ENSECAG00000016149	TRMT1	100	87.912	Equus_caballus
ENSCATG00000039850	TRMT1	60	72.796	ENSEEUG00000014102	-	100	72.796	Erinaceus_europaeus
ENSCATG00000039850	TRMT1	86	65.799	ENSELUG00000021659	trmt1	85	65.799	Esox_lucius
ENSCATG00000039850	TRMT1	99	88.146	ENSFCAG00000000483	TRMT1	99	88.146	Felis_catus
ENSCATG00000039850	TRMT1	99	84.115	ENSFDAG00000007386	TRMT1	99	84.115	Fukomys_damarensis
ENSCATG00000039850	TRMT1	81	68.148	ENSFHEG00000012865	trmt1	90	68.148	Fundulus_heteroclitus
ENSCATG00000039850	TRMT1	87	61.257	ENSGMOG00000006564	trmt1	98	61.780	Gadus_morhua
ENSCATG00000039850	TRMT1	86	68.007	ENSGAFG00000011862	trmt1	88	68.007	Gambusia_affinis
ENSCATG00000039850	TRMT1	87	63.937	ENSGACG00000000227	trmt1	92	64.348	Gasterosteus_aculeatus
ENSCATG00000039850	TRMT1	94	66.091	ENSGAGG00000016432	TRMT1	93	66.091	Gopherus_agassizii
ENSCATG00000039850	TRMT1	97	96.568	ENSGGOG00000014007	TRMT1	99	96.177	Gorilla_gorilla
ENSCATG00000039850	TRMT1	88	57.931	ENSHBUG00000008821	trmt1	95	57.931	Haplochromis_burtoni
ENSCATG00000039850	TRMT1	99	85.758	ENSHGLG00000015972	TRMT1	99	85.758	Heterocephalus_glaber_female
ENSCATG00000039850	TRMT1	99	80.275	ENSHGLG00100018112	TRMT1	99	80.275	Heterocephalus_glaber_male
ENSCATG00000039850	TRMT1	87	63.700	ENSHCOG00000009447	trmt1	88	63.700	Hippocampus_comes
ENSCATG00000039850	TRMT1	86	66.438	ENSIPUG00000002899	trmt1	85	66.781	Ictalurus_punctatus
ENSCATG00000039850	TRMT1	100	88.235	ENSSTOG00000012531	TRMT1	100	88.235	Ictidomys_tridecemlineatus
ENSCATG00000039850	TRMT1	95	84.261	ENSJJAG00000017154	Trmt1	100	81.900	Jaculus_jaculus
ENSCATG00000039850	TRMT1	86	68.476	ENSKMAG00000011809	trmt1	95	66.900	Kryptolebias_marmoratus
ENSCATG00000039850	TRMT1	86	66.900	ENSLBEG00000012703	trmt1	84	66.900	Labrus_bergylta
ENSCATG00000039850	TRMT1	87	58.520	ENSLACG00000014585	TRMT1	94	58.520	Latimeria_chalumnae
ENSCATG00000039850	TRMT1	86	63.621	ENSLOCG00000006479	trmt1	97	64.138	Lepisosteus_oculatus
ENSCATG00000039850	TRMT1	98	88.769	ENSLAFG00000014072	TRMT1	100	88.769	Loxodonta_africana
ENSCATG00000039850	TRMT1	100	99.395	ENSMFAG00000033143	TRMT1	100	99.395	Macaca_fascicularis
ENSCATG00000039850	TRMT1	99	92.378	ENSMMUG00000001167	TRMT1	100	92.378	Macaca_mulatta
ENSCATG00000039850	TRMT1	100	99.244	ENSMNEG00000037867	TRMT1	100	99.244	Macaca_nemestrina
ENSCATG00000039850	TRMT1	99	98.930	ENSMLEG00000016142	TRMT1	99	98.930	Mandrillus_leucophaeus
ENSCATG00000039850	TRMT1	87	67.832	ENSMAMG00000004357	trmt1	85	67.832	Mastacembelus_armatus
ENSCATG00000039850	TRMT1	86	65.499	ENSMZEG00005014510	trmt1	85	65.499	Maylandia_zebra
ENSCATG00000039850	TRMT1	98	83.692	ENSMAUG00000011134	Trmt1	100	82.733	Mesocricetus_auratus
ENSCATG00000039850	TRMT1	100	91.390	ENSMICG00000000793	TRMT1	100	91.390	Microcebus_murinus
ENSCATG00000039850	TRMT1	98	85.185	ENSMOCG00000015895	Trmt1	100	83.784	Microtus_ochrogaster
ENSCATG00000039850	TRMT1	86	65.849	ENSMMOG00000011097	trmt1	92	65.849	Mola_mola
ENSCATG00000039850	TRMT1	93	75.365	ENSMODG00000011619	TRMT1	99	75.365	Monodelphis_domestica
ENSCATG00000039850	TRMT1	100	82.733	MGP_CAROLIEiJ_G0031304	Trmt1	100	82.733	Mus_caroli
ENSCATG00000039850	TRMT1	100	82.432	ENSMUSG00000001909	Trmt1	100	82.432	Mus_musculus
ENSCATG00000039850	TRMT1	100	82.432	MGP_SPRETEiJ_G0032422	Trmt1	100	82.432	Mus_spretus
ENSCATG00000039850	TRMT1	100	88.520	ENSMPUG00000004210	TRMT1	95	88.520	Mustela_putorius_furo
ENSCATG00000039850	TRMT1	100	87.311	ENSMLUG00000012809	TRMT1	99	87.311	Myotis_lucifugus
ENSCATG00000039850	TRMT1	100	83.459	ENSNGAG00000022486	Trmt1	100	83.459	Nannospalax_galili
ENSCATG00000039850	TRMT1	75	68.955	ENSNBRG00000024376	trmt1	85	68.955	Neolamprologus_brichardi
ENSCATG00000039850	TRMT1	82	97.238	ENSNLEG00000013019	-	99	95.876	Nomascus_leucogenys
ENSCATG00000039850	TRMT1	90	76.756	ENSMEUG00000013756	TRMT1	100	76.756	Notamacropus_eugenii
ENSCATG00000039850	TRMT1	81	87.500	ENSOPRG00000009471	-	81	87.500	Ochotona_princeps
ENSCATG00000039850	TRMT1	99	85.452	ENSODEG00000010323	TRMT1	99	85.452	Octodon_degus
ENSCATG00000039850	TRMT1	94	64.734	ENSONIG00000000400	trmt1	99	64.734	Oreochromis_niloticus
ENSCATG00000039850	TRMT1	79	88.762	ENSOCUG00000021934	TRMT1	99	88.762	Oryctolagus_cuniculus
ENSCATG00000039850	TRMT1	86	62.630	ENSORLG00000020074	trmt1	90	62.630	Oryzias_latipes
ENSCATG00000039850	TRMT1	86	65.499	ENSORLG00020007561	trmt1	89	65.499	Oryzias_latipes_hni
ENSCATG00000039850	TRMT1	86	65.849	ENSORLG00015006547	trmt1	86	65.849	Oryzias_latipes_hsok
ENSCATG00000039850	TRMT1	86	66.550	ENSOMEG00000019343	trmt1	86	66.550	Oryzias_melastigma
ENSCATG00000039850	TRMT1	95	88.449	ENSOGAG00000025576	TRMT1	99	88.449	Otolemur_garnettii
ENSCATG00000039850	TRMT1	100	71.922	ENSOARG00000009397	TRMT1	94	72.222	Ovis_aries
ENSCATG00000039850	TRMT1	98	80.000	ENSPPRG00000012117	TRMT1	100	80.000	Panthera_pardus
ENSCATG00000039850	TRMT1	77	90.274	ENSPTIG00000008833	TRMT1	97	90.274	Panthera_tigris_altaica
ENSCATG00000039850	TRMT1	97	71.473	ENSPTRG00000050421	-	98	71.473	Pan_troglodytes
ENSCATG00000039850	TRMT1	97	96.412	ENSPTRG00000010557	TRMT1	99	96.024	Pan_troglodytes
ENSCATG00000039850	TRMT1	87	76.687	ENSPANG00000034058	-	98	76.687	Papio_anubis
ENSCATG00000039850	TRMT1	99	99.543	ENSPANG00000009247	TRMT1	99	99.543	Papio_anubis
ENSCATG00000039850	TRMT1	87	68.815	ENSPKIG00000005309	trmt1	84	68.815	Paramormyrops_kingsleyae
ENSCATG00000039850	TRMT1	85	60.638	ENSPSIG00000008762	TRMT1	80	60.638	Pelodiscus_sinensis
ENSCATG00000039850	TRMT1	87	66.376	ENSPMGG00000019764	trmt1	90	66.376	Periophthalmus_magnuspinnatus
ENSCATG00000039850	TRMT1	98	86.533	ENSPEMG00000016247	Trmt1	100	84.985	Peromyscus_maniculatus_bairdii
ENSCATG00000039850	TRMT1	95	56.709	ENSPMAG00000004329	trmt1	96	56.709	Petromyzon_marinus
ENSCATG00000039850	TRMT1	96	74.143	ENSPCIG00000019273	TRMT1	99	74.143	Phascolarctos_cinereus
ENSCATG00000039850	TRMT1	86	69.231	ENSPFOG00000008527	trmt1	88	69.231	Poecilia_formosa
ENSCATG00000039850	TRMT1	86	69.056	ENSPLAG00000018788	trmt1	88	70.881	Poecilia_latipinna
ENSCATG00000039850	TRMT1	86	69.056	ENSPMEG00000013120	trmt1	88	69.056	Poecilia_mexicana
ENSCATG00000039850	TRMT1	86	68.357	ENSPREG00000000211	trmt1	85	68.357	Poecilia_reticulata
ENSCATG00000039850	TRMT1	99	96.177	ENSPPYG00000009622	TRMT1	99	96.177	Pongo_abelii
ENSCATG00000039850	TRMT1	98	79.692	ENSPCAG00000003698	TRMT1	99	79.692	Procavia_capensis
ENSCATG00000039850	TRMT1	99	91.743	ENSPCOG00000008653	TRMT1	99	91.743	Propithecus_coquereli
ENSCATG00000039850	TRMT1	99	88.550	ENSPVAG00000015076	TRMT1	99	88.550	Pteropus_vampyrus
ENSCATG00000039850	TRMT1	86	64.098	ENSPNYG00000013960	trmt1	92	64.098	Pundamilia_nyererei
ENSCATG00000039850	TRMT1	80	69.231	ENSPNAG00000024859	trmt1	88	69.231	Pygocentrus_nattereri
ENSCATG00000039850	TRMT1	95	84.202	ENSRNOG00000002914	Trmt1	99	84.202	Rattus_norvegicus
ENSCATG00000039850	TRMT1	95	73.684	ENSRBIG00000037505	-	99	73.594	Rhinopithecus_bieti
ENSCATG00000039850	TRMT1	100	97.731	ENSRBIG00000038324	TRMT1	100	97.731	Rhinopithecus_bieti
ENSCATG00000039850	TRMT1	100	97.579	ENSRROG00000028599	TRMT1	100	97.579	Rhinopithecus_roxellana
ENSCATG00000039850	TRMT1	95	72.887	ENSRROG00000031847	-	98	72.812	Rhinopithecus_roxellana
ENSCATG00000039850	TRMT1	77	37.430	YDR120C	-	92	37.430	Saccharomyces_cerevisiae
ENSCATG00000039850	TRMT1	98	88.018	ENSSBOG00000028861	TRMT1	99	90.894	Saimiri_boliviensis_boliviensis
ENSCATG00000039850	TRMT1	89	77.342	ENSSHAG00000014381	TRMT1	98	76.105	Sarcophilus_harrisii
ENSCATG00000039850	TRMT1	87	68.412	ENSSFOG00015004139	trmt1	84	68.412	Scleropages_formosus
ENSCATG00000039850	TRMT1	86	67.247	ENSSMAG00000021136	trmt1	85	67.247	Scophthalmus_maximus
ENSCATG00000039850	TRMT1	86	67.657	ENSSDUG00000012740	trmt1	84	67.657	Seriola_dumerili
ENSCATG00000039850	TRMT1	86	67.483	ENSSLDG00000005971	trmt1	84	67.483	Seriola_lalandi_dorsalis
ENSCATG00000039850	TRMT1	86	84.507	ENSSARG00000005138	TRMT1	100	84.507	Sorex_araneus
ENSCATG00000039850	TRMT1	88	54.966	ENSSPUG00000001084	TRMT1	91	55.308	Sphenodon_punctatus
ENSCATG00000039850	TRMT1	87	64.583	ENSSPAG00000007153	trmt1	94	64.583	Stegastes_partitus
ENSCATG00000039850	TRMT1	96	89.812	ENSSSCG00000013744	TRMT1	100	89.812	Sus_scrofa
ENSCATG00000039850	TRMT1	86	63.258	ENSTRUG00000010700	trmt1	86	63.432	Takifugu_rubripes
ENSCATG00000039850	TRMT1	87	66.492	ENSTNIG00000018808	trmt1	98	66.492	Tetraodon_nigroviridis
ENSCATG00000039850	TRMT1	97	85.736	ENSTTRG00000006379	TRMT1	99	85.258	Tursiops_truncatus
ENSCATG00000039850	TRMT1	98	87.250	ENSUAMG00000022911	TRMT1	100	86.342	Ursus_americanus
ENSCATG00000039850	TRMT1	96	87.755	ENSUMAG00000006027	TRMT1	100	87.755	Ursus_maritimus
ENSCATG00000039850	TRMT1	100	88.973	ENSVVUG00000024177	TRMT1	100	88.973	Vulpes_vulpes
ENSCATG00000039850	TRMT1	70	72.668	ENSXETG00000033863	TRMT1	92	72.668	Xenopus_tropicalis
ENSCATG00000039850	TRMT1	86	68.531	ENSXCOG00000015733	trmt1	88	68.531	Xiphophorus_couchianus
ENSCATG00000039850	TRMT1	87	68.000	ENSXMAG00000013823	trmt1	98	68.000	Xiphophorus_maculatus