EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000040859 (Gene tree)
Gene ID: 105584381
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 17325 bases
Position: chrKQ012775.1:2507266-2524590
Accession: 105584381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000036057	PPR	PF01535.20	6.1e-16	1	2
ENSCATP00000036057	PPR	PF01535.20	6.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000060345	-	3202	XM_012057091	ENSCATP00000036057	701 (aa)	XP_011912481	A0A2K5NEX0

Gene Model

Click here to download ENSCATG00000040859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000040859's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000040859	-	100	93.581	ENSG00000106246	PTCD1	100	93.581	Homo_sapiens
ENSCATG00000040859	-	100	93.581	ENSG00000248919	ATP5MF-PTCD1	93	93.581	Homo_sapiens
ENSCATG00000040859	-	80	46.737	ENSAPOG00000010679	ptcd1	85	46.869	Acanthochromis_polyacanthus
ENSCATG00000040859	-	99	77.292	ENSAMEG00000006224	-	93	77.010	Ailuropoda_melanoleuca
ENSCATG00000040859	-	83	49.578	ENSACIG00000017861	ptcd1	83	49.493	Amphilophus_citrinellus
ENSCATG00000040859	-	88	45.280	ENSAOCG00000022617	ptcd1	81	48.122	Amphiprion_ocellaris
ENSCATG00000040859	-	92	46.166	ENSAOCG00000020741	-	84	47.720	Amphiprion_ocellaris
ENSCATG00000040859	-	96	45.228	ENSAPEG00000022632	ptcd1	93	45.228	Amphiprion_percula
ENSCATG00000040859	-	83	50.426	ENSATEG00000007016	ptcd1	80	50.424	Anabas_testudineus
ENSCATG00000040859	-	87	58.481	ENSAPLG00000006862	-	95	58.320	Anas_platyrhynchos
ENSCATG00000040859	-	99	55.064	ENSACAG00000012871	-	92	54.922	Anolis_carolinensis
ENSCATG00000040859	-	98	89.083	ENSANAG00000035790	-	100	88.792	Aotus_nancymaae
ENSCATG00000040859	-	83	48.398	ENSACLG00000002824	ptcd1	80	48.311	Astatotilapia_calliptera
ENSCATG00000040859	-	89	46.308	ENSAMXG00000037292	ptcd1	91	46.308	Astyanax_mexicanus
ENSCATG00000040859	-	100	76.912	ENSBTAG00000020440	-	87	76.629	Bos_taurus
ENSCATG00000040859	-	100	89.347	ENSCJAG00000015815	-	100	88.920	Callithrix_jacchus
ENSCATG00000040859	-	100	75.565	ENSCAFG00000015055	-	93	75.282	Canis_familiaris
ENSCATG00000040859	-	100	75.565	ENSCAFG00020014480	-	93	75.282	Canis_lupus_dingo
ENSCATG00000040859	-	100	76.312	ENSCHIG00000027000	-	99	76.028	Capra_hircus
ENSCATG00000040859	-	100	80.226	ENSTSYG00000029495	-	100	79.802	Carlito_syrichta
ENSCATG00000040859	-	93	74.618	ENSCAPG00000014660	-	99	74.312	Cavia_aperea
ENSCATG00000040859	-	99	73.894	ENSCPOG00000001780	-	99	73.609	Cavia_porcellus
ENSCATG00000040859	-	100	87.660	ENSCCAG00000034025	-	100	87.376	Cebus_capucinus
ENSCATG00000040859	-	98	76.504	ENSCLAG00000006354	-	100	75.634	Chinchilla_lanigera
ENSCATG00000040859	-	91	97.816	ENSCSAG00000017794	-	95	97.816	Chlorocebus_sabaeus
ENSCATG00000040859	-	97	54.434	ENSCPBG00000020866	-	97	54.309	Chrysemys_picta_bellii
ENSCATG00000040859	-	82	31.409	ENSCING00000007717	-	90	32.288	Ciona_intestinalis
ENSCATG00000040859	-	100	95.007	ENSCANG00000023441	-	100	95.007	Colobus_angolensis_palliatus
ENSCATG00000040859	-	99	74.355	ENSCGRG00001023686	Ptcd1	99	74.355	Cricetulus_griseus_chok1gshd
ENSCATG00000040859	-	99	73.932	ENSCGRG00000015031	Ptcd1	99	73.932	Cricetulus_griseus_crigri
ENSCATG00000040859	-	84	48.235	ENSCSEG00000002378	ptcd1	80	48.639	Cynoglossus_semilaevis
ENSCATG00000040859	-	85	48.510	ENSCVAG00000003621	ptcd1	88	47.920	Cyprinodon_variegatus
ENSCATG00000040859	-	83	49.239	ENSCVAG00000015826	ptcd1	81	48.639	Cyprinodon_variegatus
ENSCATG00000040859	-	89	49.531	ENSDARG00000076176	ptcd1	88	49.758	Danio_rerio
ENSCATG00000040859	-	99	73.371	ENSDNOG00000009957	-	99	73.371	Dasypus_novemcinctus
ENSCATG00000040859	-	98	74.101	ENSDORG00000000740	Ptcd1	99	73.957	Dipodomys_ordii
ENSCATG00000040859	-	90	40.876	ENSEBUG00000014515	ptcd1	99	41.327	Eptatretus_burgeri
ENSCATG00000040859	-	100	78.822	ENSEASG00005002480	-	100	78.261	Equus_asinus_asinus
ENSCATG00000040859	-	100	79.243	ENSECAG00000016617	-	100	78.682	Equus_caballus
ENSCATG00000040859	-	84	48.237	ENSELUG00000016517	ptcd1	82	48.232	Esox_lucius
ENSCATG00000040859	-	100	75.882	ENSFCAG00000015069	-	100	75.458	Felis_catus
ENSCATG00000040859	-	93	57.375	ENSFALG00000013803	-	92	58.657	Ficedula_albicollis
ENSCATG00000040859	-	100	75.745	ENSFDAG00000006393	-	100	75.603	Fukomys_damarensis
ENSCATG00000040859	-	74	47.137	ENSFHEG00000012491	ptcd1	87	47.137	Fundulus_heteroclitus
ENSCATG00000040859	-	86	47.611	ENSGMOG00000007639	ptcd1	96	47.611	Gadus_morhua
ENSCATG00000040859	-	86	58.517	ENSGALG00000004711	-	87	58.517	Gallus_gallus
ENSCATG00000040859	-	84	47.987	ENSGAFG00000013175	ptcd1	82	48.061	Gambusia_affinis
ENSCATG00000040859	-	87	48.697	ENSGACG00000016607	ptcd1	91	48.534	Gasterosteus_aculeatus
ENSCATG00000040859	-	92	54.681	ENSGAGG00000021832	-	100	54.451	Gopherus_agassizii
ENSCATG00000040859	-	99	93.571	ENSGGOG00000015123	-	99	93.571	Gorilla_gorilla
ENSCATG00000040859	-	83	48.229	ENSHBUG00000018275	ptcd1	80	48.142	Haplochromis_burtoni
ENSCATG00000040859	-	100	76.204	ENSHGLG00000017621	-	100	76.062	Heterocephalus_glaber_female
ENSCATG00000040859	-	100	76.204	ENSHGLG00100007218	-	100	76.062	Heterocephalus_glaber_male
ENSCATG00000040859	-	83	48.370	ENSHCOG00000010784	ptcd1	82	48.448	Hippocampus_comes
ENSCATG00000040859	-	100	74.334	ENSSTOG00000001682	-	100	73.913	Ictidomys_tridecemlineatus
ENSCATG00000040859	-	100	73.759	ENSJJAG00000000319	Ptcd1	100	73.475	Jaculus_jaculus
ENSCATG00000040859	-	83	49.320	ENSKMAG00000008708	ptcd1	80	49.233	Kryptolebias_marmoratus
ENSCATG00000040859	-	87	47.987	ENSLBEG00000008061	ptcd1	83	48.293	Labrus_bergylta
ENSCATG00000040859	-	87	58.587	ENSLACG00000011172	ptcd1	86	58.587	Latimeria_chalumnae
ENSCATG00000040859	-	86	54.705	ENSLOCG00000004833	ptcd1	93	55.017	Lepisosteus_oculatus
ENSCATG00000040859	-	99	71.146	ENSLAFG00000002588	-	99	70.721	Loxodonta_africana
ENSCATG00000040859	-	100	99.572	ENSMFAG00000041324	-	100	99.572	Macaca_fascicularis
ENSCATG00000040859	-	100	99.287	ENSMMUG00000030408	-	100	99.287	Macaca_mulatta
ENSCATG00000040859	-	100	99.572	ENSMNEG00000043786	-	100	99.572	Macaca_nemestrina
ENSCATG00000040859	-	100	76.748	ENSMLEG00000031179	-	100	78.887	Mandrillus_leucophaeus
ENSCATG00000040859	-	88	48.875	ENSMAMG00000007623	ptcd1	80	50.000	Mastacembelus_armatus
ENSCATG00000040859	-	83	48.398	ENSMZEG00005012722	ptcd1	80	48.311	Maylandia_zebra
ENSCATG00000040859	-	98	56.276	ENSMGAG00000004211	-	92	56.559	Meleagris_gallopavo
ENSCATG00000040859	-	99	77.997	ENSMICG00000017428	-	99	77.574	Microcebus_murinus
ENSCATG00000040859	-	87	46.982	ENSMMOG00000020243	ptcd1	88	48.294	Mola_mola
ENSCATG00000040859	-	98	58.436	ENSMODG00000001350	-	99	58.356	Monodelphis_domestica
ENSCATG00000040859	-	83	49.916	ENSMALG00000018442	ptcd1	80	49.745	Monopterus_albus
ENSCATG00000040859	-	99	74.747	MGP_CAROLIEiJ_G0028011	Ptcd1	99	74.747	Mus_caroli
ENSCATG00000040859	-	99	74.459	ENSMUSG00000029624	Ptcd1	99	74.459	Mus_musculus
ENSCATG00000040859	-	99	74.747	MGP_PahariEiJ_G0024580	Ptcd1	99	74.747	Mus_pahari
ENSCATG00000040859	-	99	74.603	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.603	Mus_spretus
ENSCATG00000040859	-	100	75.140	ENSMPUG00000016518	-	100	75.000	Mustela_putorius_furo
ENSCATG00000040859	-	100	78.792	ENSMLUG00000010994	-	94	78.371	Myotis_lucifugus
ENSCATG00000040859	-	88	47.235	ENSNBRG00000010079	ptcd1	85	47.876	Neolamprologus_brichardi
ENSCATG00000040859	-	100	92.147	ENSNLEG00000011060	-	100	92.147	Nomascus_leucogenys
ENSCATG00000040859	-	97	62.014	ENSMEUG00000006930	-	99	62.014	Notamacropus_eugenii
ENSCATG00000040859	-	89	76.347	ENSOPRG00000013647	-	89	76.347	Ochotona_princeps
ENSCATG00000040859	-	83	47.386	ENSONIG00000003168	ptcd1	95	47.297	Oreochromis_niloticus
ENSCATG00000040859	-	80	58.156	ENSOANG00000007728	-	73	57.838	Ornithorhynchus_anatinus
ENSCATG00000040859	-	99	72.766	ENSOCUG00000010584	-	98	72.199	Oryctolagus_cuniculus
ENSCATG00000040859	-	85	49.085	ENSORLG00000009275	ptcd1	85	49.164	Oryzias_latipes
ENSCATG00000040859	-	85	48.033	ENSORLG00020000988	ptcd1	85	47.855	Oryzias_latipes_hni
ENSCATG00000040859	-	85	48.419	ENSORLG00015010557	ptcd1	85	48.495	Oryzias_latipes_hsok
ENSCATG00000040859	-	85	48.752	ENSOMEG00000020627	ptcd1	87	48.744	Oryzias_melastigma
ENSCATG00000040859	-	99	75.000	ENSOGAG00000010877	-	100	74.571	Otolemur_garnettii
ENSCATG00000040859	-	100	72.238	ENSOARG00000018676	-	100	71.955	Ovis_aries
ENSCATG00000040859	-	100	93.153	ENSPPAG00000036024	-	100	93.153	Pan_paniscus
ENSCATG00000040859	-	100	76.487	ENSPPRG00000003478	-	100	76.204	Panthera_pardus
ENSCATG00000040859	-	100	93.153	ENSPTRG00000019452	-	100	93.153	Pan_troglodytes
ENSCATG00000040859	-	100	99.572	ENSPANG00000016730	-	100	99.572	Papio_anubis
ENSCATG00000040859	-	96	48.915	ENSPKIG00000014215	ptcd1	97	48.621	Paramormyrops_kingsleyae
ENSCATG00000040859	-	84	57.930	ENSPSIG00000011184	-	100	58.306	Pelodiscus_sinensis
ENSCATG00000040859	-	73	41.524	ENSPMAG00000009667	ptcd1	99	41.524	Petromyzon_marinus
ENSCATG00000040859	-	98	59.642	ENSPCIG00000024778	-	98	59.452	Phascolarctos_cinereus
ENSCATG00000040859	-	90	46.395	ENSPFOG00000004458	ptcd1	82	48.398	Poecilia_formosa
ENSCATG00000040859	-	84	48.490	ENSPLAG00000011051	ptcd1	82	48.567	Poecilia_latipinna
ENSCATG00000040859	-	90	46.865	ENSPMEG00000020547	ptcd1	82	48.567	Poecilia_mexicana
ENSCATG00000040859	-	82	47.386	ENSPREG00000000059	ptcd1	81	47.458	Poecilia_reticulata
ENSCATG00000040859	-	95	93.816	ENSPPYG00000017377	-	100	93.816	Pongo_abelii
ENSCATG00000040859	-	81	74.286	ENSPCAG00000001852	-	88	72.936	Procavia_capensis
ENSCATG00000040859	-	99	79.630	ENSPCOG00000018596	-	99	78.754	Propithecus_coquereli
ENSCATG00000040859	-	67	89.000	ENSPVAG00000007529	-	72	89.000	Pteropus_vampyrus
ENSCATG00000040859	-	83	48.061	ENSPNYG00000019993	ptcd1	80	47.973	Pundamilia_nyererei
ENSCATG00000040859	-	86	49.840	ENSPNAG00000014931	ptcd1	90	48.973	Pygocentrus_nattereri
ENSCATG00000040859	-	98	74.818	ENSRNOG00000000987	Ptcd1	98	75.036	Rattus_norvegicus
ENSCATG00000040859	-	100	95.863	ENSRBIG00000043393	-	100	95.863	Rhinopithecus_bieti
ENSCATG00000040859	-	100	95.720	ENSRROG00000036420	-	100	95.720	Rhinopithecus_roxellana
ENSCATG00000040859	-	100	88.905	ENSSBOG00000024114	-	100	88.620	Saimiri_boliviensis_boliviensis
ENSCATG00000040859	-	98	56.985	ENSSHAG00000011376	-	98	61.137	Sarcophilus_harrisii
ENSCATG00000040859	-	85	53.571	ENSSFOG00015007909	ptcd1	82	54.160	Scleropages_formosus
ENSCATG00000040859	-	83	48.485	ENSSMAG00000000218	ptcd1	91	48.644	Scophthalmus_maximus
ENSCATG00000040859	-	88	46.825	ENSSDUG00000015671	ptcd1	86	47.164	Seriola_dumerili
ENSCATG00000040859	-	84	48.904	ENSSLDG00000014261	ptcd1	83	48.727	Seriola_lalandi_dorsalis
ENSCATG00000040859	-	96	53.686	ENSSPUG00000003540	-	97	53.453	Sphenodon_punctatus
ENSCATG00000040859	-	84	48.829	ENSSPAG00000011049	ptcd1	80	48.904	Stegastes_partitus
ENSCATG00000040859	-	92	78.793	ENSSSCG00000007622	-	98	78.387	Sus_scrofa
ENSCATG00000040859	-	87	61.011	ENSTGUG00000007563	-	99	61.589	Taeniopygia_guttata
ENSCATG00000040859	-	86	48.052	ENSTRUG00000013471	ptcd1	79	48.722	Takifugu_rubripes
ENSCATG00000040859	-	85	48.586	ENSTNIG00000008271	ptcd1	83	49.402	Tetraodon_nigroviridis
ENSCATG00000040859	-	100	74.650	ENSTBEG00000011021	-	100	74.230	Tupaia_belangeri
ENSCATG00000040859	-	99	75.788	ENSTTRG00000003006	-	99	75.645	Tursiops_truncatus
ENSCATG00000040859	-	99	77.151	ENSUAMG00000008049	-	99	76.869	Ursus_americanus
ENSCATG00000040859	-	99	75.461	ENSVVUG00000008836	-	100	75.177	Vulpes_vulpes
ENSCATG00000040859	-	93	49.705	ENSXETG00000009891	ptcd1	87	52.124	Xenopus_tropicalis
ENSCATG00000040859	-	90	47.152	ENSXMAG00000015540	ptcd1	85	47.974	Xiphophorus_maculatus