EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000040873 (Gene tree)
Gene ID: 105579663
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 32635 bases
Position: chrKQ012541.1:7292357-7324991
Accession: 105579663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000036095	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000060387	RAB5C-202	741	-	ENSCATP00000036098	246 (aa)	-	A0A2K5NF04
ENSCATT00000060384	RAB5C-201	1689	XM_012046673	ENSCATP00000036095	216 (aa)	XP_011902063	A0A2K5NFJ5

Gene Model

Click here to download ENSCATG00000040873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000040873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000040873	RAB5C	80	89.595	ENSCATG00000034978	RAB5B	95	89.595
ENSCATG00000040873	RAB5C	90	42.512	ENSCATG00000029188	-	94	42.512
ENSCATG00000040873	RAB5C	89	37.436	ENSCATG00000037465	RAB35	96	37.436
ENSCATG00000040873	RAB5C	55	31.148	ENSCATG00000041869	ARL8A	62	31.148
ENSCATG00000040873	RAB5C	83	39.459	ENSCATG00000040441	RAB30	91	39.459
ENSCATG00000040873	RAB5C	75	40.361	ENSCATG00000022275	RAB33A	70	40.361
ENSCATG00000040873	RAB5C	79	35.632	ENSCATG00000003875	RAB36	52	35.632
ENSCATG00000040873	RAB5C	77	32.934	ENSCATG00000030021	KRAS	90	32.164
ENSCATG00000040873	RAB5C	76	41.463	ENSCATG00000037380	RAB41	73	41.463
ENSCATG00000040873	RAB5C	89	43.590	ENSCATG00000030853	RAB1A	96	43.590
ENSCATG00000040873	RAB5C	76	42.683	ENSCATG00000035718	RAB14	76	42.683
ENSCATG00000040873	RAB5C	93	37.864	ENSCATG00000007092	RAB33B	89	37.864
ENSCATG00000040873	RAB5C	77	44.311	ENSCATG00000044849	RAB2B	77	44.311
ENSCATG00000040873	RAB5C	81	33.702	ENSCATG00000031194	HRAS	94	33.702
ENSCATG00000040873	RAB5C	71	36.601	ENSCATG00000034307	-	65	36.601
ENSCATG00000040873	RAB5C	90	41.748	ENSCATG00000034739	-	94	41.748
ENSCATG00000040873	RAB5C	100	87.500	ENSCATG00000033588	-	100	87.500
ENSCATG00000040873	RAB5C	81	37.143	ENSCATG00000041116	RAB15	82	42.857
ENSCATG00000040873	RAB5C	90	47.938	ENSCATG00000011350	RAB22A	98	47.938
ENSCATG00000040873	RAB5C	94	41.379	ENSCATG00000041263	RAB6B	98	41.379
ENSCATG00000040873	RAB5C	55	31.967	ENSCATG00000039869	ARL8B	62	31.967
ENSCATG00000040873	RAB5C	80	31.792	ENSCATG00000036856	RHEB	88	31.792
ENSCATG00000040873	RAB5C	77	33.333	ENSCATG00000030178	RERG	84	33.333
ENSCATG00000040873	RAB5C	89	44.330	ENSCATG00000002342	RAB1B	96	44.330
ENSCATG00000040873	RAB5C	87	36.842	ENSCATG00000037784	RAB12	89	33.632
ENSCATG00000040873	RAB5C	89	35.354	ENSCATG00000018182	RAB9A	97	35.354
ENSCATG00000040873	RAB5C	75	44.720	ENSCATG00000028334	RAB2A	76	44.720
ENSCATG00000040873	RAB5C	80	35.838	ENSCATG00000027876	RAB23	73	35.838
ENSCATG00000040873	RAB5C	89	37.500	ENSCATG00000041779	-	95	37.500
ENSCATG00000040873	RAB5C	91	39.801	ENSCATG00000009672	RAB18	93	40.404
ENSCATG00000040873	RAB5C	76	31.515	ENSCATG00000040984	NRAS	92	31.515
ENSCATG00000040873	RAB5C	89	31.088	ENSCATG00000029662	RAB25	92	30.144
ENSCATG00000040873	RAB5C	75	36.585	ENSCATG00000034919	RAB39B	77	36.585
ENSCATG00000040873	RAB5C	94	40.291	ENSCATG00000012428	RAB6A	98	40.291
ENSCATG00000040873	RAB5C	77	42.442	ENSCATG00000041773	-	88	43.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000040873	RAB5C	100	100.000	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSCATG00000040873	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSCATG00000040873	RAB5C	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSCATG00000040873	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSCATG00000040873	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSCATG00000040873	RAB5C	97	89.100	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSCATG00000040873	RAB5C	100	89.450	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSCATG00000040873	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSCATG00000040873	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSCATG00000040873	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSCATG00000040873	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSCATG00000040873	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSCATG00000040873	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSCATG00000040873	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSCATG00000040873	RAB5C	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSCATG00000040873	RAB5C	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSCATG00000040873	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSCATG00000040873	RAB5C	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSCATG00000040873	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSCATG00000040873	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSCATG00000040873	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSCATG00000040873	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSCATG00000040873	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSCATG00000040873	RAB5C	100	99.074	ENSCGRG00001014226	Rab5c	100	99.074	Cricetulus_griseus_chok1gshd
ENSCATG00000040873	RAB5C	100	99.074	ENSCGRG00000007534	Rab5c	100	99.074	Cricetulus_griseus_crigri
ENSCATG00000040873	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSCATG00000040873	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSCATG00000040873	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSCATG00000040873	RAB5C	100	98.611	ENSDORG00000006819	Rab5c	100	98.611	Dipodomys_ordii
ENSCATG00000040873	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSCATG00000040873	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSCATG00000040873	RAB5C	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSCATG00000040873	RAB5C	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSCATG00000040873	RAB5C	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSCATG00000040873	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSCATG00000040873	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSCATG00000040873	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSCATG00000040873	RAB5C	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSCATG00000040873	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSCATG00000040873	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSCATG00000040873	RAB5C	80	87.209	ENSGMOG00000001876	-	99	87.209	Gadus_morhua
ENSCATG00000040873	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSCATG00000040873	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSCATG00000040873	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSCATG00000040873	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSCATG00000040873	RAB5C	100	100.000	ENSGGOG00000005472	RAB5C	100	100.000	Gorilla_gorilla
ENSCATG00000040873	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSCATG00000040873	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSCATG00000040873	RAB5C	100	94.907	ENSHGLG00000012067	RAB5C	100	94.907	Heterocephalus_glaber_female
ENSCATG00000040873	RAB5C	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSCATG00000040873	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSCATG00000040873	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSCATG00000040873	RAB5C	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSCATG00000040873	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSCATG00000040873	RAB5C	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSCATG00000040873	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSCATG00000040873	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSCATG00000040873	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSCATG00000040873	RAB5C	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSCATG00000040873	RAB5C	100	100.000	ENSMFAG00000039627	RAB5C	100	100.000	Macaca_fascicularis
ENSCATG00000040873	RAB5C	100	100.000	ENSMNEG00000000355	RAB5C	100	100.000	Macaca_nemestrina
ENSCATG00000040873	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSCATG00000040873	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSCATG00000040873	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSCATG00000040873	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSCATG00000040873	RAB5C	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSCATG00000040873	RAB5C	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSCATG00000040873	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSCATG00000040873	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSCATG00000040873	RAB5C	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSCATG00000040873	RAB5C	97	84.834	ENSMALG00000006052	rab5c	96	84.651	Monopterus_albus
ENSCATG00000040873	RAB5C	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSCATG00000040873	RAB5C	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSCATG00000040873	RAB5C	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSCATG00000040873	RAB5C	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSCATG00000040873	RAB5C	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSCATG00000040873	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSCATG00000040873	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSCATG00000040873	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSCATG00000040873	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSCATG00000040873	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSCATG00000040873	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSCATG00000040873	RAB5C	100	88.073	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSCATG00000040873	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSCATG00000040873	RAB5C	100	88.073	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSCATG00000040873	RAB5C	100	88.073	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSCATG00000040873	RAB5C	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSCATG00000040873	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSCATG00000040873	RAB5C	100	100.000	ENSPPAG00000037206	RAB5C	100	100.000	Pan_paniscus
ENSCATG00000040873	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSCATG00000040873	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSCATG00000040873	RAB5C	100	100.000	ENSPTRG00000009194	RAB5C	100	100.000	Pan_troglodytes
ENSCATG00000040873	RAB5C	99	89.767	ENSPKIG00000001237	-	99	89.767	Paramormyrops_kingsleyae
ENSCATG00000040873	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSCATG00000040873	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSCATG00000040873	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSCATG00000040873	RAB5C	99	78.972	ENSPMAG00000007867	rab5c	99	78.972	Petromyzon_marinus
ENSCATG00000040873	RAB5C	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSCATG00000040873	RAB5C	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSCATG00000040873	RAB5C	100	97.685	ENSPCIG00000020225	-	100	97.685	Phascolarctos_cinereus
ENSCATG00000040873	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSCATG00000040873	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSCATG00000040873	RAB5C	98	88.732	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSCATG00000040873	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSCATG00000040873	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSCATG00000040873	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSCATG00000040873	RAB5C	100	100.000	ENSPPYG00000008398	RAB5C	100	100.000	Pongo_abelii
ENSCATG00000040873	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSCATG00000040873	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSCATG00000040873	RAB5C	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSCATG00000040873	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSCATG00000040873	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSCATG00000040873	RAB5C	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSCATG00000040873	RAB5C	99	91.705	ENSPNAG00000028138	rab5c	98	91.705	Pygocentrus_nattereri
ENSCATG00000040873	RAB5C	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSCATG00000040873	RAB5C	100	100.000	ENSRBIG00000031376	RAB5C	100	100.000	Rhinopithecus_bieti
ENSCATG00000040873	RAB5C	100	100.000	ENSRROG00000032895	RAB5C	100	100.000	Rhinopithecus_roxellana
ENSCATG00000040873	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSCATG00000040873	RAB5C	100	98.148	ENSSHAG00000005267	-	100	98.148	Sarcophilus_harrisii
ENSCATG00000040873	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSCATG00000040873	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSCATG00000040873	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSCATG00000040873	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSCATG00000040873	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSCATG00000040873	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSCATG00000040873	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSCATG00000040873	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSCATG00000040873	RAB5C	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSCATG00000040873	RAB5C	100	99.537	ENSTBEG00000007092	RAB5C	100	99.537	Tupaia_belangeri
ENSCATG00000040873	RAB5C	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSCATG00000040873	RAB5C	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSCATG00000040873	RAB5C	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSCATG00000040873	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSCATG00000040873	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.235	Xiphophorus_couchianus
ENSCATG00000040873	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus
ENSCATG00000040873	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus