EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000041368 (Gene tree)
Gene ID: 105572229
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 199727 bases
Position: chrKQ011696.1:11855380-12055106
Accession: 105572229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000037291	R3H	PF01424.22	5.1e-05	1	1
ENSCATP00000037288	R3H	PF01424.22	5.5e-05	1	1
ENSCATP00000037285	R3H	PF01424.22	6.1e-05	1	1
ENSCATP00000037291	RNA_bind	PF08675.11	8.4e-33	1	1
ENSCATP00000037289	RNA_bind	PF08675.11	1.5e-25	1	1
ENSCATP00000037288	RNA_bind	PF08675.11	2.1e-25	1	1
ENSCATP00000037285	RNA_bind	PF08675.11	2.3e-25	1	1
ENSCATP00000037291	CAF1	PF04857.20	1.3e-89	1	1
ENSCATP00000037285	CAF1	PF04857.20	1.6e-89	1	1
ENSCATP00000037288	CAF1	PF04857.20	3.6e-69	1	2
ENSCATP00000037288	CAF1	PF04857.20	3.6e-69	2	2
ENSCATP00000037289	CAF1	PF04857.20	3.7e-53	1	2
ENSCATP00000037289	CAF1	PF04857.20	3.7e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000061586	PARN-203	1203	-	ENSCATP00000037289	400 (aa)	-	A0A2K5NIC6
ENSCATT00000061585	PARN-202	1590	-	ENSCATP00000037288	529 (aa)	-	A0A2K5NIC8
ENSCATT00000061582	PARN-201	1728	XM_012030652	ENSCATP00000037285	575 (aa)	XP_011886042	A0A2K5NIP7
ENSCATT00000061588	PARN-204	1816	-	ENSCATP00000037291	558 (aa)	-	A0A2K5NIY2

Gene Model

Click here to download ENSCATG00000041368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000041368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000041368	PARN	59	35.862	ENSCATG00000033196	PNLDC1	71	35.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000041368	PARN	100	100.000	ENSG00000140694	PARN	91	100.000	Homo_sapiens
ENSCATG00000041368	PARN	100	96.610	ENSAMEG00000011208	PARN	90	96.559	Ailuropoda_melanoleuca
ENSCATG00000041368	PARN	95	76.306	ENSACIG00000000619	parn	83	76.306	Amphilophus_citrinellus
ENSCATG00000041368	PARN	95	78.652	ENSAOCG00000003465	parn	78	78.652	Amphiprion_ocellaris
ENSCATG00000041368	PARN	84	78.224	ENSAPEG00000010661	parn	91	78.224	Amphiprion_percula
ENSCATG00000041368	PARN	95	79.478	ENSATEG00000004661	parn	78	79.478	Anabas_testudineus
ENSCATG00000041368	PARN	99	93.846	ENSAPLG00000013914	PARN	91	91.189	Anas_platyrhynchos
ENSCATG00000041368	PARN	96	89.831	ENSACAG00000004973	PARN	82	87.242	Anolis_carolinensis
ENSCATG00000041368	PARN	100	100.000	ENSANAG00000031516	PARN	91	100.000	Aotus_nancymaae
ENSCATG00000041368	PARN	95	79.401	ENSACLG00000004742	parn	79	79.401	Astatotilapia_calliptera
ENSCATG00000041368	PARN	95	78.531	ENSAMXG00000012390	parn	87	76.083	Astyanax_mexicanus
ENSCATG00000041368	PARN	100	98.305	ENSBTAG00000018097	PARN	100	82.915	Bos_taurus
ENSCATG00000041368	PARN	100	100.000	ENSCJAG00000015866	PARN	91	100.000	Callithrix_jacchus
ENSCATG00000041368	PARN	100	96.552	ENSCAFG00000018795	PARN	90	96.552	Canis_familiaris
ENSCATG00000041368	PARN	100	96.610	ENSCAFG00020024126	PARN	90	96.552	Canis_lupus_dingo
ENSCATG00000041368	PARN	100	98.305	ENSCHIG00000018143	PARN	100	83.568	Capra_hircus
ENSCATG00000041368	PARN	84	63.825	ENSCAPG00000007984	PARN	78	63.825	Cavia_aperea
ENSCATG00000041368	PARN	100	98.305	ENSCPOG00000002263	PARN	90	95.943	Cavia_porcellus
ENSCATG00000041368	PARN	100	100.000	ENSCCAG00000030367	PARN	91	100.000	Cebus_capucinus
ENSCATG00000041368	PARN	100	96.610	ENSCLAG00000015406	PARN	99	80.908	Chinchilla_lanigera
ENSCATG00000041368	PARN	100	100.000	ENSCSAG00000008142	PARN	90	100.000	Chlorocebus_sabaeus
ENSCATG00000041368	PARN	98	98.077	ENSCHOG00000007014	PARN	100	70.962	Choloepus_hoffmanni
ENSCATG00000041368	PARN	84	91.277	ENSCPBG00000006609	PARN	81	91.277	Chrysemys_picta_bellii
ENSCATG00000041368	PARN	92	43.797	ENSCING00000010142	-	99	43.797	Ciona_intestinalis
ENSCATG00000041368	PARN	100	100.000	ENSCANG00000028849	-	90	98.780	Colobus_angolensis_palliatus
ENSCATG00000041368	PARN	100	96.610	ENSCGRG00001012096	Parn	100	80.253	Cricetulus_griseus_chok1gshd
ENSCATG00000041368	PARN	100	96.610	ENSCGRG00000004939	Parn	100	80.253	Cricetulus_griseus_crigri
ENSCATG00000041368	PARN	95	75.791	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSCATG00000041368	PARN	95	77.612	ENSCVAG00000014848	parn	79	77.612	Cyprinodon_variegatus
ENSCATG00000041368	PARN	95	74.624	ENSDARG00000102634	parn	100	58.333	Danio_rerio
ENSCATG00000041368	PARN	100	98.305	ENSDNOG00000000833	PARN	96	94.485	Dasypus_novemcinctus
ENSCATG00000041368	PARN	82	94.297	ENSETEG00000014828	-	78	94.297	Echinops_telfairi
ENSCATG00000041368	PARN	51	72.195	ENSEBUG00000007052	PARN	70	70.536	Eptatretus_burgeri
ENSCATG00000041368	PARN	100	98.305	ENSEASG00005011400	PARN	90	96.755	Equus_asinus_asinus
ENSCATG00000041368	PARN	100	96.610	ENSECAG00000017792	PARN	90	96.552	Equus_caballus
ENSCATG00000041368	PARN	85	84.615	ENSEEUG00000010370	PARN	86	84.615	Erinaceus_europaeus
ENSCATG00000041368	PARN	95	76.636	ENSELUG00000013139	parn	71	76.636	Esox_lucius
ENSCATG00000041368	PARN	100	97.363	ENSFCAG00000044961	PARN	90	97.363	Felis_catus
ENSCATG00000041368	PARN	98	93.462	ENSFALG00000003911	PARN	90	90.535	Ficedula_albicollis
ENSCATG00000041368	PARN	100	98.305	ENSFDAG00000009234	PARN	90	95.538	Fukomys_damarensis
ENSCATG00000041368	PARN	95	70.275	ENSFHEG00000013738	parn	92	77.966	Fundulus_heteroclitus
ENSCATG00000041368	PARN	95	76.493	ENSGMOG00000003231	parn	97	76.493	Gadus_morhua
ENSCATG00000041368	PARN	100	94.615	ENSGALG00000003091	PARN	84	90.395	Gallus_gallus
ENSCATG00000041368	PARN	95	77.323	ENSGAFG00000011061	parn	79	77.323	Gambusia_affinis
ENSCATG00000041368	PARN	95	77.239	ENSGACG00000019501	parn	86	77.239	Gasterosteus_aculeatus
ENSCATG00000041368	PARN	54	86.916	ENSGAGG00000023281	PARN	64	86.508	Gopherus_agassizii
ENSCATG00000041368	PARN	96	100.000	ENSGGOG00000025224	PARN	91	100.000	Gorilla_gorilla
ENSCATG00000041368	PARN	100	77.966	ENSHBUG00000017906	parn	100	68.386	Haplochromis_burtoni
ENSCATG00000041368	PARN	100	98.305	ENSHGLG00000010886	PARN	100	81.534	Heterocephalus_glaber_female
ENSCATG00000041368	PARN	100	98.305	ENSHGLG00100014659	PARN	100	81.534	Heterocephalus_glaber_male
ENSCATG00000041368	PARN	91	84.615	ENSHCOG00000008683	parn	91	73.913	Hippocampus_comes
ENSCATG00000041368	PARN	95	66.290	ENSIPUG00000012401	parn	79	66.290	Ictalurus_punctatus
ENSCATG00000041368	PARN	100	96.610	ENSSTOG00000007519	PARN	100	83.465	Ictidomys_tridecemlineatus
ENSCATG00000041368	PARN	100	98.305	ENSJJAG00000023049	Parn	100	82.512	Jaculus_jaculus
ENSCATG00000041368	PARN	95	78.172	ENSKMAG00000009462	parn	79	78.172	Kryptolebias_marmoratus
ENSCATG00000041368	PARN	95	77.425	ENSLBEG00000009167	parn	84	77.425	Labrus_bergylta
ENSCATG00000041368	PARN	90	78.373	ENSLACG00000004207	PARN	100	77.358	Latimeria_chalumnae
ENSCATG00000041368	PARN	95	80.791	ENSLOCG00000000715	parn	78	80.791	Lepisosteus_oculatus
ENSCATG00000041368	PARN	100	98.305	ENSLAFG00000015036	PARN	100	85.759	Loxodonta_africana
ENSCATG00000041368	PARN	100	100.000	ENSMFAG00000044852	PARN	89	100.000	Macaca_fascicularis
ENSCATG00000041368	PARN	100	100.000	ENSMMUG00000018849	PARN	90	100.000	Macaca_mulatta
ENSCATG00000041368	PARN	100	100.000	ENSMNEG00000045108	PARN	90	100.000	Macaca_nemestrina
ENSCATG00000041368	PARN	100	100.000	ENSMLEG00000031743	PARN	90	100.000	Mandrillus_leucophaeus
ENSCATG00000041368	PARN	95	77.985	ENSMAMG00000006939	parn	78	77.985	Mastacembelus_armatus
ENSCATG00000041368	PARN	100	77.966	ENSMZEG00005013590	parn	100	68.342	Maylandia_zebra
ENSCATG00000041368	PARN	93	100.000	ENSMGAG00000001004	PARN	79	90.818	Meleagris_gallopavo
ENSCATG00000041368	PARN	95	94.286	ENSMAUG00000008025	Parn	100	74.571	Mesocricetus_auratus
ENSCATG00000041368	PARN	100	98.434	ENSMICG00000016053	PARN	91	98.305	Microcebus_murinus
ENSCATG00000041368	PARN	89	91.296	ENSMOCG00000022211	Parn	100	91.296	Microtus_ochrogaster
ENSCATG00000041368	PARN	99	72.251	ENSMMOG00000011333	parn	94	72.251	Mola_mola
ENSCATG00000041368	PARN	89	93.952	ENSMODG00000004915	PARN	99	94.141	Monodelphis_domestica
ENSCATG00000041368	PARN	95	78.957	ENSMALG00000019426	parn	91	78.957	Monopterus_albus
ENSCATG00000041368	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	80.380	Mus_caroli
ENSCATG00000041368	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSCATG00000041368	PARN	58	30.120	ENSMUSG00000073460	Pnldc1	66	36.496	Mus_musculus
ENSCATG00000041368	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	79.747	Mus_pahari
ENSCATG00000041368	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	80.222	Mus_spretus
ENSCATG00000041368	PARN	100	98.305	ENSMPUG00000014464	PARN	100	82.316	Mustela_putorius_furo
ENSCATG00000041368	PARN	88	94.130	ENSMLUG00000005414	PARN	100	94.130	Myotis_lucifugus
ENSCATG00000041368	PARN	100	77.966	ENSNBRG00000006805	parn	90	76.779	Neolamprologus_brichardi
ENSCATG00000041368	PARN	100	100.000	ENSNLEG00000010241	PARN	91	100.000	Nomascus_leucogenys
ENSCATG00000041368	PARN	76	92.754	ENSMEUG00000008178	-	83	65.076	Notamacropus_eugenii
ENSCATG00000041368	PARN	98	98.077	ENSOPRG00000012187	PARN	100	78.288	Ochotona_princeps
ENSCATG00000041368	PARN	100	98.305	ENSODEG00000001617	PARN	100	77.760	Octodon_degus
ENSCATG00000041368	PARN	95	79.588	ENSONIG00000000151	parn	83	79.143	Oreochromis_niloticus
ENSCATG00000041368	PARN	58	94.421	ENSOANG00000020155	-	70	92.989	Ornithorhynchus_anatinus
ENSCATG00000041368	PARN	99	96.935	ENSOCUG00000000322	PARN	90	95.714	Oryctolagus_cuniculus
ENSCATG00000041368	PARN	95	77.612	ENSORLG00020010313	parn	80	77.612	Oryzias_latipes_hni
ENSCATG00000041368	PARN	98	79.661	ENSORLG00015000300	parn	80	77.425	Oryzias_latipes_hsok
ENSCATG00000041368	PARN	95	77.612	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSCATG00000041368	PARN	88	94.747	ENSOGAG00000014626	PARN	100	94.747	Otolemur_garnettii
ENSCATG00000041368	PARN	88	97.571	ENSOARG00000007574	PARN	100	97.571	Ovis_aries
ENSCATG00000041368	PARN	100	100.000	ENSPPAG00000031438	PARN	91	100.000	Pan_paniscus
ENSCATG00000041368	PARN	100	97.170	ENSPPRG00000018583	PARN	90	97.160	Panthera_pardus
ENSCATG00000041368	PARN	100	97.363	ENSPTIG00000012135	PARN	90	97.363	Panthera_tigris_altaica
ENSCATG00000041368	PARN	100	100.000	ENSPTRG00000007792	PARN	91	100.000	Pan_troglodytes
ENSCATG00000041368	PARN	100	100.000	ENSPANG00000020099	PARN	90	100.000	Papio_anubis
ENSCATG00000041368	PARN	95	78.719	ENSPKIG00000022807	parn	84	74.302	Paramormyrops_kingsleyae
ENSCATG00000041368	PARN	50	30.000	ENSPSIG00000011419	PNLDC1	85	30.000	Pelodiscus_sinensis
ENSCATG00000041368	PARN	95	90.207	ENSPSIG00000014804	PARN	83	90.207	Pelodiscus_sinensis
ENSCATG00000041368	PARN	92	76.459	ENSPMGG00000014431	parn	74	75.093	Periophthalmus_magnuspinnatus
ENSCATG00000041368	PARN	100	94.915	ENSPEMG00000018439	Parn	100	77.373	Peromyscus_maniculatus_bairdii
ENSCATG00000041368	PARN	93	67.308	ENSPMAG00000003956	parn	99	67.308	Petromyzon_marinus
ENSCATG00000041368	PARN	76	86.761	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSCATG00000041368	PARN	95	77.425	ENSPFOG00000012823	parn	78	77.425	Poecilia_formosa
ENSCATG00000041368	PARN	95	77.612	ENSPLAG00000006395	parn	78	77.612	Poecilia_latipinna
ENSCATG00000041368	PARN	95	77.612	ENSPMEG00000007711	parn	78	77.612	Poecilia_mexicana
ENSCATG00000041368	PARN	95	77.239	ENSPREG00000000147	parn	78	77.239	Poecilia_reticulata
ENSCATG00000041368	PARN	100	98.788	ENSPPYG00000007123	PARN	90	98.788	Pongo_abelii
ENSCATG00000041368	PARN	86	96.154	ENSPCAG00000001741	PARN	85	88.736	Procavia_capensis
ENSCATG00000041368	PARN	100	98.305	ENSPCOG00000019292	PARN	91	98.305	Propithecus_coquereli
ENSCATG00000041368	PARN	98	98.077	ENSPVAG00000002547	PARN	90	93.004	Pteropus_vampyrus
ENSCATG00000041368	PARN	100	77.966	ENSPNYG00000006835	parn	100	65.886	Pundamilia_nyererei
ENSCATG00000041368	PARN	91	75.296	ENSPNAG00000018905	parn	84	75.296	Pygocentrus_nattereri
ENSCATG00000041368	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSCATG00000041368	PARN	67	100.000	ENSRBIG00000018726	PARN	81	100.000	Rhinopithecus_bieti
ENSCATG00000041368	PARN	67	100.000	ENSRROG00000011162	-	81	100.000	Rhinopithecus_roxellana
ENSCATG00000041368	PARN	100	100.000	ENSSBOG00000034726	PARN	90	97.561	Saimiri_boliviensis_boliviensis
ENSCATG00000041368	PARN	75	93.062	ENSSHAG00000008493	PARN	94	93.062	Sarcophilus_harrisii
ENSCATG00000041368	PARN	95	79.849	ENSSFOG00015014165	parn	92	75.543	Scleropages_formosus
ENSCATG00000041368	PARN	95	76.493	ENSSMAG00000000685	parn	87	71.587	Scophthalmus_maximus
ENSCATG00000041368	PARN	95	77.881	ENSSDUG00000014555	parn	78	77.881	Seriola_dumerili
ENSCATG00000041368	PARN	91	94.763	ENSSARG00000014339	PARN	89	95.392	Sorex_araneus
ENSCATG00000041368	PARN	100	91.954	ENSSPUG00000007719	PARN	90	91.278	Sphenodon_punctatus
ENSCATG00000041368	PARN	95	79.775	ENSSPAG00000007095	parn	86	74.719	Stegastes_partitus
ENSCATG00000041368	PARN	100	98.305	ENSSSCG00000007878	PARN	89	82.473	Sus_scrofa
ENSCATG00000041368	PARN	99	93.846	ENSTGUG00000004971	PARN	91	90.574	Taeniopygia_guttata
ENSCATG00000041368	PARN	50	58.716	ENSTRUG00000015208	-	86	76.667	Takifugu_rubripes
ENSCATG00000041368	PARN	100	79.661	ENSTNIG00000008252	parn	100	66.719	Tetraodon_nigroviridis
ENSCATG00000041368	PARN	86	81.707	ENSTBEG00000010407	PARN	100	66.897	Tupaia_belangeri
ENSCATG00000041368	PARN	98	98.077	ENSTTRG00000002843	PARN	90	96.708	Tursiops_truncatus
ENSCATG00000041368	PARN	78	83.486	ENSUAMG00000008283	PARN	97	78.298	Ursus_americanus
ENSCATG00000041368	PARN	100	98.305	ENSUMAG00000004527	PARN	90	97.160	Ursus_maritimus
ENSCATG00000041368	PARN	94	98.077	ENSVPAG00000008968	PARN	90	93.004	Vicugna_pacos
ENSCATG00000041368	PARN	100	97.160	ENSVVUG00000019509	PARN	90	97.160	Vulpes_vulpes
ENSCATG00000041368	PARN	100	81.967	ENSXETG00000010994	parn	100	82.700	Xenopus_tropicalis
ENSCATG00000041368	PARN	95	73.371	ENSXCOG00000015990	parn	90	73.371	Xiphophorus_couchianus
ENSCATG00000041368	PARN	95	77.612	ENSXMAG00000014783	parn	78	77.612	Xiphophorus_maculatus