EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000041717 (Gene tree)
Gene ID: 105582069
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 28017 bases
Position: chrKQ009613.1:8009726-8037742
Accession: 105582069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000038029	ResIII	PF04851.15	3e-08	1	1
ENSCATP00000038027	ResIII	PF04851.15	3.1e-08	1	1
ENSCATP00000038026	ResIII	PF04851.15	3.2e-08	1	1
ENSCATP00000038034	ResIII	PF04851.15	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000062329	CHD3-202	7406	XM_012052108	ENSCATP00000038027	2000 (aa)	XP_011907498	A0A2K5NKP2
ENSCATT00000062328	CHD3-201	7376	XM_012052059	ENSCATP00000038026	2059 (aa)	XP_011907449	A0A2K5NL31
ENSCATT00000062336	CHD3-204	6126	-	ENSCATP00000038034	2041 (aa)	-	A0A2K5NKH0
ENSCATT00000062331	CHD3-203	7301	XM_012052152	ENSCATP00000038029	1966 (aa)	XP_011907542	A0A2K5NKG5

Gene Model

Click here to download ENSCATG00000041717's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000041717's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000041717	CHD3	89	71.072	ENSCATG00000006345	-	96	70.032
ENSCATG00000041717	CHD3	94	68.397	ENSCATG00000043011	CHD5	97	68.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000041717	CHD3	100	99.695	ENSG00000170004	CHD3	100	99.695	Homo_sapiens
ENSCATG00000041717	CHD3	84	76.358	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSCATG00000041717	CHD3	68	97.214	ENSAMEG00000003025	-	100	97.214	Ailuropoda_melanoleuca
ENSCATG00000041717	CHD3	80	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSCATG00000041717	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSCATG00000041717	CHD3	91	80.756	ENSAPEG00000006341	chd3	95	77.728	Amphiprion_percula
ENSCATG00000041717	CHD3	91	81.315	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSCATG00000041717	CHD3	96	85.252	ENSACAG00000004276	CHD3	96	84.728	Anolis_carolinensis
ENSCATG00000041717	CHD3	100	96.400	ENSANAG00000034323	CHD3	99	99.254	Aotus_nancymaae
ENSCATG00000041717	CHD3	91	78.816	ENSACLG00000009222	chd3	99	74.699	Astatotilapia_calliptera
ENSCATG00000041717	CHD3	100	98.205	ENSBTAG00000014377	CHD3	100	98.205	Bos_taurus
ENSCATG00000041717	CHD3	100	99.271	ENSCJAG00000014766	CHD3	100	99.271	Callithrix_jacchus
ENSCATG00000041717	CHD3	100	97.801	ENSCAFG00000016859	CHD3	100	97.801	Canis_familiaris
ENSCATG00000041717	CHD3	94	98.264	ENSCAFG00020007422	CHD3	100	98.309	Canis_lupus_dingo
ENSCATG00000041717	CHD3	99	98.535	ENSCHIG00000016737	CHD3	100	98.535	Capra_hircus
ENSCATG00000041717	CHD3	100	98.932	ENSTSYG00000035658	CHD3	100	98.932	Carlito_syrichta
ENSCATG00000041717	CHD3	99	94.681	ENSCAPG00000014864	CHD3	99	94.681	Cavia_aperea
ENSCATG00000041717	CHD3	99	97.190	ENSCPOG00000022653	CHD3	99	97.190	Cavia_porcellus
ENSCATG00000041717	CHD3	100	99.223	ENSCCAG00000034792	CHD3	100	99.223	Cebus_capucinus
ENSCATG00000041717	CHD3	98	98.448	ENSCLAG00000010523	CHD3	100	98.448	Chinchilla_lanigera
ENSCATG00000041717	CHD3	98	99.695	ENSCSAG00000011122	CHD3	100	99.695	Chlorocebus_sabaeus
ENSCATG00000041717	CHD3	89	84.423	ENSCPBG00000011966	CHD3	99	87.784	Chrysemys_picta_bellii
ENSCATG00000041717	CHD3	100	99.898	ENSCANG00000037641	CHD3	100	99.898	Colobus_angolensis_palliatus
ENSCATG00000041717	CHD3	98	97.673	ENSCGRG00001011306	Chd3	100	97.673	Cricetulus_griseus_chok1gshd
ENSCATG00000041717	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSCATG00000041717	CHD3	91	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSCATG00000041717	CHD3	86	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSCATG00000041717	CHD3	93	77.362	ENSDARG00000021405	chd3	99	76.480	Danio_rerio
ENSCATG00000041717	CHD3	98	83.763	ENSDNOG00000047846	CHD3	98	83.763	Dasypus_novemcinctus
ENSCATG00000041717	CHD3	98	97.930	ENSDORG00000010713	Chd3	100	97.930	Dipodomys_ordii
ENSCATG00000041717	CHD3	96	92.112	ENSETEG00000017733	CHD3	100	92.112	Echinops_telfairi
ENSCATG00000041717	CHD3	54	77.758	ENSEBUG00000008310	chd3	99	70.313	Eptatretus_burgeri
ENSCATG00000041717	CHD3	92	98.691	ENSEASG00005019360	CHD3	100	98.691	Equus_asinus_asinus
ENSCATG00000041717	CHD3	92	98.745	ENSECAG00000010051	CHD3	100	98.745	Equus_caballus
ENSCATG00000041717	CHD3	91	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSCATG00000041717	CHD3	78	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSCATG00000041717	CHD3	100	98.058	ENSFCAG00000009629	CHD3	100	98.058	Felis_catus
ENSCATG00000041717	CHD3	99	95.058	ENSFDAG00000008220	CHD3	99	95.935	Fukomys_damarensis
ENSCATG00000041717	CHD3	89	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSCATG00000041717	CHD3	59	74.829	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSCATG00000041717	CHD3	97	70.842	ENSGACG00000019275	chd3	100	70.947	Gasterosteus_aculeatus
ENSCATG00000041717	CHD3	74	87.101	ENSGAGG00000013164	CHD3	98	87.101	Gopherus_agassizii
ENSCATG00000041717	CHD3	100	99.542	ENSGGOG00000013496	CHD3	100	99.542	Gorilla_gorilla
ENSCATG00000041717	CHD3	99	98.100	ENSHGLG00000012017	CHD3	100	98.100	Heterocephalus_glaber_female
ENSCATG00000041717	CHD3	88	91.014	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSCATG00000041717	CHD3	93	72.357	ENSHCOG00000010170	chd3	96	72.959	Hippocampus_comes
ENSCATG00000041717	CHD3	84	80.424	ENSIPUG00000003271	chd3	96	80.848	Ictalurus_punctatus
ENSCATG00000041717	CHD3	99	98.448	ENSSTOG00000025907	CHD3	100	98.965	Ictidomys_tridecemlineatus
ENSCATG00000041717	CHD3	100	96.602	ENSJJAG00000017633	Chd3	100	97.672	Jaculus_jaculus
ENSCATG00000041717	CHD3	86	90.047	ENSKMAG00000019292	chd3	97	75.795	Kryptolebias_marmoratus
ENSCATG00000041717	CHD3	95	70.706	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSCATG00000041717	CHD3	95	75.038	ENSLACG00000008031	CHD3	99	74.324	Latimeria_chalumnae
ENSCATG00000041717	CHD3	96	77.225	ENSLOCG00000013965	chd3	97	77.174	Lepisosteus_oculatus
ENSCATG00000041717	CHD3	94	94.436	ENSLAFG00000000572	CHD3	100	94.436	Loxodonta_africana
ENSCATG00000041717	CHD3	100	99.950	ENSMFAG00000020113	CHD3	100	99.950	Macaca_fascicularis
ENSCATG00000041717	CHD3	100	97.600	ENSMMUG00000022221	CHD3	100	97.600	Macaca_mulatta
ENSCATG00000041717	CHD3	100	99.950	ENSMNEG00000001728	CHD3	100	99.950	Macaca_nemestrina
ENSCATG00000041717	CHD3	100	100.000	ENSMLEG00000032249	CHD3	100	100.000	Mandrillus_leucophaeus
ENSCATG00000041717	CHD3	84	76.681	ENSMAMG00000000564	chd3	99	77.243	Mastacembelus_armatus
ENSCATG00000041717	CHD3	99	97.020	ENSMAUG00000013873	Chd3	99	94.369	Mesocricetus_auratus
ENSCATG00000041717	CHD3	100	98.835	ENSMICG00000008741	CHD3	100	98.835	Microcebus_murinus
ENSCATG00000041717	CHD3	98	97.771	ENSMOCG00000004848	Chd3	100	97.771	Microtus_ochrogaster
ENSCATG00000041717	CHD3	94	74.479	ENSMMOG00000012699	chd3	99	74.015	Mola_mola
ENSCATG00000041717	CHD3	91	94.667	ENSMODG00000007509	CHD3	100	94.667	Monodelphis_domestica
ENSCATG00000041717	CHD3	99	96.842	MGP_CAROLIEiJ_G0016564	Chd3	100	97.614	Mus_caroli
ENSCATG00000041717	CHD3	100	96.801	ENSMUSG00000018474	Chd3	100	96.801	Mus_musculus
ENSCATG00000041717	CHD3	99	96.986	MGP_PahariEiJ_G0017695	Chd3	100	97.719	Mus_pahari
ENSCATG00000041717	CHD3	100	96.752	MGP_SPRETEiJ_G0017400	Chd3	100	97.614	Mus_spretus
ENSCATG00000041717	CHD3	86	98.016	ENSMPUG00000008861	CHD3	100	98.016	Mustela_putorius_furo
ENSCATG00000041717	CHD3	100	97.003	ENSMLUG00000014643	-	100	97.003	Myotis_lucifugus
ENSCATG00000041717	CHD3	99	97.280	ENSNGAG00000000773	Chd3	99	97.280	Nannospalax_galili
ENSCATG00000041717	CHD3	84	76.464	ENSNBRG00000000636	chd3	98	75.899	Neolamprologus_brichardi
ENSCATG00000041717	CHD3	98	96.781	ENSNLEG00000009770	CHD3	100	96.781	Nomascus_leucogenys
ENSCATG00000041717	CHD3	86	91.078	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSCATG00000041717	CHD3	94	96.741	ENSOPRG00000011069	CHD3	100	96.741	Ochotona_princeps
ENSCATG00000041717	CHD3	99	97.437	ENSODEG00000017785	CHD3	100	97.437	Octodon_degus
ENSCATG00000041717	CHD3	94	75.157	ENSONIG00000009292	chd3	100	75.013	Oreochromis_niloticus
ENSCATG00000041717	CHD3	98	93.690	ENSOCUG00000029299	CHD3	100	93.591	Oryctolagus_cuniculus
ENSCATG00000041717	CHD3	81	71.727	ENSORLG00000007107	chd3	93	71.789	Oryzias_latipes
ENSCATG00000041717	CHD3	57	72.840	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSCATG00000041717	CHD3	71	80.243	ENSOMEG00000013691	chd3	99	78.188	Oryzias_melastigma
ENSCATG00000041717	CHD3	98	98.274	ENSOGAG00000003216	CHD3	100	98.274	Otolemur_garnettii
ENSCATG00000041717	CHD3	99	95.756	ENSOARG00000017855	CHD3	99	96.195	Ovis_aries
ENSCATG00000041717	CHD3	100	97.293	ENSPPAG00000032886	CHD3	100	97.293	Pan_paniscus
ENSCATG00000041717	CHD3	99	97.711	ENSPPRG00000000626	CHD3	100	97.877	Panthera_pardus
ENSCATG00000041717	CHD3	100	99.746	ENSPTRG00000008714	CHD3	100	99.746	Pan_troglodytes
ENSCATG00000041717	CHD3	100	100.000	ENSPANG00000023938	CHD3	100	100.000	Papio_anubis
ENSCATG00000041717	CHD3	93	80.681	ENSPKIG00000006305	chd3	99	79.254	Paramormyrops_kingsleyae
ENSCATG00000041717	CHD3	55	90.602	ENSPSIG00000010177	CHD3	98	90.959	Pelodiscus_sinensis
ENSCATG00000041717	CHD3	99	96.924	ENSPEMG00000014262	Chd3	100	96.924	Peromyscus_maniculatus_bairdii
ENSCATG00000041717	CHD3	99	93.289	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSCATG00000041717	CHD3	94	71.631	ENSPFOG00000012464	chd3	86	80.135	Poecilia_formosa
ENSCATG00000041717	CHD3	86	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSCATG00000041717	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSCATG00000041717	CHD3	89	84.502	ENSPREG00000011044	chd3	99	79.301	Poecilia_reticulata
ENSCATG00000041717	CHD3	100	94.700	ENSPPYG00000007940	CHD3	100	94.700	Pongo_abelii
ENSCATG00000041717	CHD3	95	97.649	ENSPCAG00000004350	CHD3	96	97.649	Procavia_capensis
ENSCATG00000041717	CHD3	100	98.302	ENSPCOG00000020952	CHD3	100	98.930	Propithecus_coquereli
ENSCATG00000041717	CHD3	85	97.412	ENSPVAG00000016344	CHD3	87	97.412	Pteropus_vampyrus
ENSCATG00000041717	CHD3	94	78.520	ENSPNAG00000020393	chd3	98	81.611	Pygocentrus_nattereri
ENSCATG00000041717	CHD3	92	96.732	ENSRNOG00000009722	Chd3	100	96.732	Rattus_norvegicus
ENSCATG00000041717	CHD3	100	96.741	ENSRBIG00000033562	CHD3	100	96.741	Rhinopithecus_bieti
ENSCATG00000041717	CHD3	100	100.000	ENSRROG00000029554	CHD3	100	100.000	Rhinopithecus_roxellana
ENSCATG00000041717	CHD3	100	99.237	ENSSBOG00000020719	CHD3	100	99.237	Saimiri_boliviensis_boliviensis
ENSCATG00000041717	CHD3	98	94.912	ENSSHAG00000014412	CHD3	100	94.912	Sarcophilus_harrisii
ENSCATG00000041717	CHD3	86	80.727	ENSSFOG00015023123	chd3	98	75.360	Scleropages_formosus
ENSCATG00000041717	CHD3	79	91.304	ENSSMAG00000006451	chd3	99	77.117	Scophthalmus_maximus
ENSCATG00000041717	CHD3	56	72.570	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSCATG00000041717	CHD3	94	77.379	ENSSPAG00000013694	chd3	99	80.101	Stegastes_partitus
ENSCATG00000041717	CHD3	99	98.174	ENSSSCG00000021363	CHD3	100	98.201	Sus_scrofa
ENSCATG00000041717	CHD3	77	74.410	ENSTRUG00000014990	chd3	89	76.269	Takifugu_rubripes
ENSCATG00000041717	CHD3	96	73.643	ENSTNIG00000012998	chd3	99	73.337	Tetraodon_nigroviridis
ENSCATG00000041717	CHD3	64	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCATG00000041717	CHD3	97	99.383	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSCATG00000041717	CHD3	92	97.115	ENSUAMG00000005475	CHD3	99	97.115	Ursus_americanus
ENSCATG00000041717	CHD3	56	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCATG00000041717	CHD3	94	98.326	ENSVVUG00000028011	CHD3	99	98.189	Vulpes_vulpes
ENSCATG00000041717	CHD3	97	72.653	ENSXETG00000012991	chd3	92	73.872	Xenopus_tropicalis
ENSCATG00000041717	CHD3	52	82.751	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSCATG00000041717	CHD3	80	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus