EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000041779 (Gene tree)
Gene ID: 105593480
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 4664 bases
Position: chrKQ010368.1:570457-575120
Accession: 105593480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000038158	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000062465	-	375	-	ENSCATP00000038162	124 (aa)	-	A0A2K5NL18
ENSCATT00000062461	-	1193	XM_012076649	ENSCATP00000038158	203 (aa)	XP_011932039	A0A2K5NKU9

Gene Model

Click here to download ENSCATG00000041779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000041779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000041779	-	87	42.781	ENSCATG00000022275	RAB33A	79	42.781
ENSCATG00000041779	-	67	30.882	ENSCATG00000010217	ARF5	72	30.882
ENSCATG00000041779	-	83	48.214	ENSCATG00000044849	RAB2B	78	48.214
ENSCATG00000041779	-	78	42.405	ENSCATG00000041263	RAB6B	83	42.405
ENSCATG00000041779	-	80	38.323	ENSCATG00000041773	-	90	38.323
ENSCATG00000041779	-	91	54.348	ENSCATG00000002342	RAB1B	92	54.348
ENSCATG00000041779	-	80	38.824	ENSCATG00000018182	RAB9A	83	38.824
ENSCATG00000041779	-	86	44.318	ENSCATG00000009672	RAB18	85	44.318
ENSCATG00000041779	-	80	49.383	ENSCATG00000040441	RAB30	80	49.383
ENSCATG00000041779	-	86	46.629	ENSCATG00000034919	RAB39B	84	46.629
ENSCATG00000041779	-	86	31.522	ENSCATG00000036856	RHEB	91	31.522
ENSCATG00000041779	-	79	38.272	ENSCATG00000040984	NRAS	90	38.272
ENSCATG00000041779	-	84	55.294	ENSCATG00000037465	RAB35	84	55.294
ENSCATG00000041779	-	84	51.744	ENSCATG00000037784	RAB12	71	51.744
ENSCATG00000041779	-	81	44.242	ENSCATG00000035718	RAB14	77	44.242
ENSCATG00000041779	-	81	38.182	ENSCATG00000027876	RAB23	69	38.182
ENSCATG00000041779	-	58	31.405	ENSCATG00000017494	ARL14	60	31.405
ENSCATG00000041779	-	91	42.424	ENSCATG00000029188	-	91	42.424
ENSCATG00000041779	-	79	39.506	ENSCATG00000031194	HRAS	85	39.506
ENSCATG00000041779	-	83	47.929	ENSCATG00000028334	RAB2A	80	47.929
ENSCATG00000041779	-	85	30.387	ENSCATG00000029662	RAB25	78	32.948
ENSCATG00000041779	-	95	37.500	ENSCATG00000040873	RAB5C	89	37.500
ENSCATG00000041779	-	91	36.757	ENSCATG00000030021	KRAS	98	37.436
ENSCATG00000041779	-	83	41.379	ENSCATG00000007092	RAB33B	76	41.379
ENSCATG00000041779	-	84	53.529	ENSCATG00000041116	RAB15	94	57.143
ENSCATG00000041779	-	78	43.671	ENSCATG00000012428	RAB6A	76	43.671
ENSCATG00000041779	-	79	37.267	ENSCATG00000037380	RAB41	72	37.267
ENSCATG00000041779	-	83	30.682	ENSCATG00000029231	DNAJC27	90	30.818
ENSCATG00000041779	-	78	40.881	ENSCATG00000034978	RAB5B	87	40.881
ENSCATG00000041779	-	79	37.423	ENSCATG00000043690	MRAS	78	37.423
ENSCATG00000041779	-	95	39.062	ENSCATG00000033588	-	89	39.062
ENSCATG00000041779	-	91	36.702	ENSCATG00000011350	RAB22A	97	36.702
ENSCATG00000041779	-	62	31.429	ENSCATG00000039104	ARFRP1	67	31.429
ENSCATG00000041779	-	83	35.632	ENSCATG00000030178	RERG	84	35.632
ENSCATG00000041779	-	81	47.273	ENSCATG00000034739	-	76	47.273
ENSCATG00000041779	-	97	51.269	ENSCATG00000030853	RAB1A	96	51.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000041779	-	100	100.000	ENSG00000143545	RAB13	100	100.000	Homo_sapiens
ENSCATG00000041779	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSCATG00000041779	-	100	98.522	ENSANAG00000030247	-	100	98.522	Aotus_nancymaae
ENSCATG00000041779	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSCATG00000041779	-	100	98.030	ENSBTAG00000017604	RAB13	100	98.030	Bos_taurus
ENSCATG00000041779	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSCATG00000041779	-	100	98.030	ENSCJAG00000009933	-	100	98.030	Callithrix_jacchus
ENSCATG00000041779	-	100	97.537	ENSCHIG00000022271	-	100	97.537	Capra_hircus
ENSCATG00000041779	-	99	91.089	ENSCPOG00000011491	-	99	91.089	Cavia_porcellus
ENSCATG00000041779	-	100	99.507	ENSCCAG00000028502	-	100	99.507	Cebus_capucinus
ENSCATG00000041779	-	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSCATG00000041779	-	100	100.000	ENSCANG00000036573	-	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000041779	-	100	95.567	ENSCGRG00001021505	Rab13	100	95.567	Cricetulus_griseus_chok1gshd
ENSCATG00000041779	-	100	95.567	ENSCGRG00000012126	Rab13	100	95.567	Cricetulus_griseus_crigri
ENSCATG00000041779	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSCATG00000041779	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSCATG00000041779	-	100	94.581	ENSDORG00000001591	Rab13	100	94.581	Dipodomys_ordii
ENSCATG00000041779	-	100	98.522	ENSEASG00005000683	-	100	98.522	Equus_asinus_asinus
ENSCATG00000041779	-	100	98.522	ENSECAG00000016551	RAB13	100	98.522	Equus_caballus
ENSCATG00000041779	-	99	90.099	ENSEEUG00000001233	-	99	90.099	Erinaceus_europaeus
ENSCATG00000041779	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSCATG00000041779	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSCATG00000041779	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSCATG00000041779	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSCATG00000041779	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSCATG00000041779	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSCATG00000041779	-	100	100.000	ENSGGOG00000023693	RAB13	100	100.000	Gorilla_gorilla
ENSCATG00000041779	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSCATG00000041779	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSCATG00000041779	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSCATG00000041779	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSCATG00000041779	-	100	97.044	ENSSTOG00000011222	-	100	97.044	Ictidomys_tridecemlineatus
ENSCATG00000041779	-	100	92.118	ENSJJAG00000010575	Rab13	100	92.118	Jaculus_jaculus
ENSCATG00000041779	-	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSCATG00000041779	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSCATG00000041779	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSCATG00000041779	-	100	100.000	ENSMFAG00000041018	RAB13	100	100.000	Macaca_fascicularis
ENSCATG00000041779	-	100	100.000	ENSMNEG00000028951	-	100	100.000	Macaca_nemestrina
ENSCATG00000041779	-	100	100.000	ENSMLEG00000042247	-	100	100.000	Mandrillus_leucophaeus
ENSCATG00000041779	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSCATG00000041779	-	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSCATG00000041779	-	100	97.044	ENSMICG00000010340	-	100	97.044	Microcebus_murinus
ENSCATG00000041779	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSCATG00000041779	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSCATG00000041779	-	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSCATG00000041779	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSCATG00000041779	-	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSCATG00000041779	-	100	95.567	ENSNGAG00000010309	Rab13	100	95.567	Nannospalax_galili
ENSCATG00000041779	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSCATG00000041779	-	100	100.000	ENSNLEG00000028944	-	100	100.000	Nomascus_leucogenys
ENSCATG00000041779	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSCATG00000041779	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSCATG00000041779	-	100	89.655	ENSODEG00000010443	-	100	89.655	Octodon_degus
ENSCATG00000041779	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSCATG00000041779	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSCATG00000041779	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSCATG00000041779	-	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSCATG00000041779	-	100	100.000	ENSPPAG00000028435	-	100	100.000	Pan_paniscus
ENSCATG00000041779	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSCATG00000041779	-	100	100.000	ENSPTRG00000001370	RAB13	100	100.000	Pan_troglodytes
ENSCATG00000041779	-	100	100.000	ENSPANG00000004479	-	100	100.000	Papio_anubis
ENSCATG00000041779	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSCATG00000041779	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSCATG00000041779	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSCATG00000041779	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSCATG00000041779	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSCATG00000041779	-	100	100.000	ENSPPYG00000000790	-	100	100.000	Pongo_abelii
ENSCATG00000041779	-	100	98.030	ENSPCOG00000012189	-	100	98.030	Propithecus_coquereli
ENSCATG00000041779	-	100	95.074	ENSPVAG00000011095	-	100	95.074	Pteropus_vampyrus
ENSCATG00000041779	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSCATG00000041779	-	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSCATG00000041779	-	100	99.507	ENSRBIG00000008552	-	100	99.507	Rhinopithecus_bieti
ENSCATG00000041779	-	100	99.507	ENSRROG00000036885	-	100	99.507	Rhinopithecus_roxellana
ENSCATG00000041779	-	100	99.015	ENSSBOG00000020342	-	100	99.015	Saimiri_boliviensis_boliviensis
ENSCATG00000041779	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSCATG00000041779	-	100	98.522	ENSSSCG00000006564	-	100	98.522	Sus_scrofa
ENSCATG00000041779	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSCATG00000041779	-	100	97.044	ENSTBEG00000012734	-	100	97.044	Tupaia_belangeri
ENSCATG00000041779	-	100	99.507	ENSTTRG00000011183	-	100	99.507	Tursiops_truncatus
ENSCATG00000041779	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSCATG00000041779	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus