EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000042060 (Gene tree)
Gene ID: 105575163
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 29532 bases
Position: chrKQ012342.1:3223876-3253407
Accession: 105575163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000038791	MMR_HSR1	PF01926.23	5e-14	1	1
ENSCATP00000038784	MMR_HSR1	PF01926.23	5.4e-14	1	1
ENSCATP00000038781	MMR_HSR1	PF01926.23	6.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000063088	LSG1-201	3566	XM_012036761	ENSCATP00000038781	717 (aa)	XP_011892151	A0A2K5NN77
ENSCATT00000063098	LSG1-203	1959	-	ENSCATP00000038791	652 (aa)	-	A0A2K5NN87
ENSCATT00000063091	LSG1-202	3389	XM_012036762	ENSCATP00000038784	659 (aa)	XP_011892152	A0A2K5NMM5

Gene Model

Click here to download ENSCATG00000042060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000042060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000042060	LSG1	100	93.465	ENSG00000041802	LSG1	98	98.276	Homo_sapiens
ENSCATG00000042060	LSG1	99	63.030	ENSAPOG00000009694	lsg1	99	64.145	Acanthochromis_polyacanthus
ENSCATG00000042060	LSG1	99	81.791	ENSAMEG00000009343	LSG1	99	82.853	Ailuropoda_melanoleuca
ENSCATG00000042060	LSG1	98	63.043	ENSACIG00000012406	lsg1	99	65.250	Amphilophus_citrinellus
ENSCATG00000042060	LSG1	99	62.727	ENSAOCG00000016066	lsg1	99	64.697	Amphiprion_ocellaris
ENSCATG00000042060	LSG1	99	63.485	ENSAPEG00000003252	lsg1	99	64.848	Amphiprion_percula
ENSCATG00000042060	LSG1	98	64.752	ENSATEG00000011794	lsg1	99	65.350	Anabas_testudineus
ENSCATG00000042060	LSG1	95	63.449	ENSACAG00000004222	LSG1	99	64.659	Anolis_carolinensis
ENSCATG00000042060	LSG1	100	92.401	ENSANAG00000021153	LSG1	100	93.921	Aotus_nancymaae
ENSCATG00000042060	LSG1	99	62.069	ENSACLG00000000520	lsg1	99	64.199	Astatotilapia_calliptera
ENSCATG00000042060	LSG1	99	62.388	ENSAMXG00000008271	lsg1	99	63.389	Astyanax_mexicanus
ENSCATG00000042060	LSG1	100	83.763	ENSBTAG00000008461	LSG1	100	85.584	Bos_taurus
ENSCATG00000042060	LSG1	68	50.785	WBGene00016907	C53H9.2	94	58.065	Caenorhabditis_elegans
ENSCATG00000042060	LSG1	100	91.489	ENSCJAG00000013962	LSG1	100	93.009	Callithrix_jacchus
ENSCATG00000042060	LSG1	95	83.200	ENSCAFG00000013445	LSG1	99	84.800	Canis_familiaris
ENSCATG00000042060	LSG1	99	81.997	ENSCAFG00020002216	LSG1	99	84.430	Canis_lupus_dingo
ENSCATG00000042060	LSG1	99	82.827	ENSCHIG00000015769	LSG1	99	84.347	Capra_hircus
ENSCATG00000042060	LSG1	100	87.102	ENSTSYG00000001447	LSG1	100	88.619	Carlito_syrichta
ENSCATG00000042060	LSG1	95	75.478	ENSCAPG00000009856	LSG1	100	75.917	Cavia_aperea
ENSCATG00000042060	LSG1	100	91.185	ENSCCAG00000035744	LSG1	100	92.553	Cebus_capucinus
ENSCATG00000042060	LSG1	100	98.326	ENSCSAG00000008796	LSG1	100	98.326	Chlorocebus_sabaeus
ENSCATG00000042060	LSG1	99	68.563	ENSCPBG00000015941	LSG1	86	68.201	Chrysemys_picta_bellii
ENSCATG00000042060	LSG1	66	62.632	ENSCING00000007079	-	92	63.158	Ciona_intestinalis
ENSCATG00000042060	LSG1	84	48.387	ENSCSAVG00000002514	-	96	56.735	Ciona_savignyi
ENSCATG00000042060	LSG1	100	97.546	ENSCANG00000030709	LSG1	100	97.568	Colobus_angolensis_palliatus
ENSCATG00000042060	LSG1	100	80.909	ENSCGRG00001019846	Lsg1	100	82.273	Cricetulus_griseus_chok1gshd
ENSCATG00000042060	LSG1	100	80.909	ENSCGRG00000014617	Lsg1	100	82.273	Cricetulus_griseus_crigri
ENSCATG00000042060	LSG1	98	63.538	ENSCSEG00000008522	lsg1	99	63.952	Cynoglossus_semilaevis
ENSCATG00000042060	LSG1	97	65.319	ENSCVAG00000002484	lsg1	99	67.375	Cyprinodon_variegatus
ENSCATG00000042060	LSG1	99	66.161	ENSDARG00000015352	lsg1	99	67.678	Danio_rerio
ENSCATG00000042060	LSG1	100	83.384	ENSDNOG00000006224	LSG1	100	84.743	Dasypus_novemcinctus
ENSCATG00000042060	LSG1	84	55.328	FBgn0266284	Ns3	93	56.420	Drosophila_melanogaster
ENSCATG00000042060	LSG1	89	86.667	ENSETEG00000003888	LSG1	89	86.667	Echinops_telfairi
ENSCATG00000042060	LSG1	88	57.286	ENSEBUG00000003119	lsg1	85	57.096	Eptatretus_burgeri
ENSCATG00000042060	LSG1	100	84.674	ENSEASG00005000678	LSG1	100	86.495	Equus_asinus_asinus
ENSCATG00000042060	LSG1	100	84.977	ENSECAG00000017659	LSG1	100	86.798	Equus_caballus
ENSCATG00000042060	LSG1	87	83.621	ENSEEUG00000015217	LSG1	87	83.621	Erinaceus_europaeus
ENSCATG00000042060	LSG1	99	62.387	ENSELUG00000023973	lsg1	99	62.689	Esox_lucius
ENSCATG00000042060	LSG1	99	84.347	ENSFCAG00000024957	LSG1	99	85.714	Felis_catus
ENSCATG00000042060	LSG1	92	65.742	ENSFALG00000007210	LSG1	94	66.884	Ficedula_albicollis
ENSCATG00000042060	LSG1	100	77.376	ENSFDAG00000017373	LSG1	100	79.211	Fukomys_damarensis
ENSCATG00000042060	LSG1	97	64.253	ENSFHEG00000003680	lsg1	99	65.075	Fundulus_heteroclitus
ENSCATG00000042060	LSG1	82	69.748	ENSGMOG00000015834	lsg1	87	71.429	Gadus_morhua
ENSCATG00000042060	LSG1	99	63.540	ENSGALG00000007058	LSG1	94	61.528	Gallus_gallus
ENSCATG00000042060	LSG1	97	64.907	ENSGAFG00000015831	lsg1	99	65.957	Gambusia_affinis
ENSCATG00000042060	LSG1	98	62.385	ENSGACG00000009323	lsg1	99	62.388	Gasterosteus_aculeatus
ENSCATG00000042060	LSG1	100	95.129	ENSGGOG00000000520	LSG1	100	95.897	Gorilla_gorilla
ENSCATG00000042060	LSG1	99	62.293	ENSHBUG00000005659	lsg1	99	63.582	Haplochromis_burtoni
ENSCATG00000042060	LSG1	100	75.904	ENSHGLG00000017390	LSG1	100	76.923	Heterocephalus_glaber_female
ENSCATG00000042060	LSG1	100	75.904	ENSHGLG00100018587	LSG1	100	76.923	Heterocephalus_glaber_male
ENSCATG00000042060	LSG1	97	63.524	ENSHCOG00000016848	lsg1	99	63.040	Hippocampus_comes
ENSCATG00000042060	LSG1	99	63.897	ENSIPUG00000008631	lsg1	99	66.012	Ictalurus_punctatus
ENSCATG00000042060	LSG1	82	81.818	ENSSTOG00000010234	LSG1	99	81.818	Ictidomys_tridecemlineatus
ENSCATG00000042060	LSG1	100	79.638	ENSJJAG00000015513	Lsg1	100	80.967	Jaculus_jaculus
ENSCATG00000042060	LSG1	98	62.791	ENSKMAG00000009681	lsg1	99	63.678	Kryptolebias_marmoratus
ENSCATG00000042060	LSG1	98	61.335	ENSLBEG00000024261	lsg1	99	62.861	Labrus_bergylta
ENSCATG00000042060	LSG1	99	64.820	ENSLACG00000013399	LSG1	99	66.018	Latimeria_chalumnae
ENSCATG00000042060	LSG1	98	65.385	ENSLOCG00000004918	lsg1	99	66.063	Lepisosteus_oculatus
ENSCATG00000042060	LSG1	100	82.549	ENSLAFG00000012919	-	100	83.915	Loxodonta_africana
ENSCATG00000042060	LSG1	100	99.163	ENSMFAG00000039903	LSG1	100	99.163	Macaca_fascicularis
ENSCATG00000042060	LSG1	100	97.264	ENSMMUG00000010708	LSG1	100	99.240	Macaca_mulatta
ENSCATG00000042060	LSG1	100	98.773	ENSMNEG00000031538	LSG1	100	98.773	Macaca_nemestrina
ENSCATG00000042060	LSG1	100	99.233	ENSMLEG00000041184	LSG1	100	99.240	Mandrillus_leucophaeus
ENSCATG00000042060	LSG1	99	61.725	ENSMAMG00000000470	lsg1	99	62.105	Mastacembelus_armatus
ENSCATG00000042060	LSG1	99	62.443	ENSMZEG00005017865	lsg1	99	63.731	Maylandia_zebra
ENSCATG00000042060	LSG1	88	65.247	ENSMGAG00000007050	LSG1	99	65.932	Meleagris_gallopavo
ENSCATG00000042060	LSG1	91	79.602	ENSMAUG00000016976	Lsg1	93	81.095	Mesocricetus_auratus
ENSCATG00000042060	LSG1	100	84.674	ENSMICG00000049087	LSG1	100	86.343	Microcebus_murinus
ENSCATG00000042060	LSG1	100	79.909	ENSMOCG00000022136	Lsg1	100	80.514	Microtus_ochrogaster
ENSCATG00000042060	LSG1	83	72.517	ENSMMOG00000008884	lsg1	99	69.597	Mola_mola
ENSCATG00000042060	LSG1	99	58.610	ENSMODG00000019828	LSG1	99	57.421	Monodelphis_domestica
ENSCATG00000042060	LSG1	100	80.243	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.791	Mus_caroli
ENSCATG00000042060	LSG1	100	80.547	ENSMUSG00000022538	Lsg1	100	82.094	Mus_musculus
ENSCATG00000042060	LSG1	98	81.019	MGP_PahariEiJ_G0016352	Lsg1	100	82.576	Mus_pahari
ENSCATG00000042060	LSG1	100	80.699	MGP_SPRETEiJ_G0021544	Lsg1	100	82.246	Mus_spretus
ENSCATG00000042060	LSG1	99	83.131	ENSMPUG00000003734	LSG1	99	84.498	Mustela_putorius_furo
ENSCATG00000042060	LSG1	99	84.825	ENSMLUG00000012548	LSG1	99	86.039	Myotis_lucifugus
ENSCATG00000042060	LSG1	100	80.425	ENSNGAG00000021872	Lsg1	100	79.970	Nannospalax_galili
ENSCATG00000042060	LSG1	100	95.434	ENSNLEG00000008293	LSG1	100	96.049	Nomascus_leucogenys
ENSCATG00000042060	LSG1	68	69.944	ENSMEUG00000009041	-	82	70.103	Notamacropus_eugenii
ENSCATG00000042060	LSG1	99	62.048	ENSONIG00000002635	lsg1	99	63.556	Oreochromis_niloticus
ENSCATG00000042060	LSG1	95	71.338	ENSOANG00000012742	LSG1	99	71.815	Ornithorhynchus_anatinus
ENSCATG00000042060	LSG1	100	84.674	ENSOCUG00000004817	LSG1	100	86.343	Oryctolagus_cuniculus
ENSCATG00000042060	LSG1	98	62.733	ENSORLG00000007695	lsg1	99	64.079	Oryzias_latipes
ENSCATG00000042060	LSG1	98	62.539	ENSORLG00020016286	lsg1	99	63.636	Oryzias_latipes_hni
ENSCATG00000042060	LSG1	98	63.199	ENSORLG00015012025	lsg1	99	63.927	Oryzias_latipes_hsok
ENSCATG00000042060	LSG1	98	61.705	ENSOMEG00000022379	lsg1	99	63.222	Oryzias_melastigma
ENSCATG00000042060	LSG1	100	84.592	ENSOGAG00000003475	LSG1	100	86.254	Otolemur_garnettii
ENSCATG00000042060	LSG1	99	82.246	ENSOARG00000020403	LSG1	99	83.612	Ovis_aries
ENSCATG00000042060	LSG1	100	94.216	ENSPPAG00000029271	LSG1	100	94.985	Pan_paniscus
ENSCATG00000042060	LSG1	99	83.759	ENSPPRG00000010281	LSG1	99	84.962	Panthera_pardus
ENSCATG00000042060	LSG1	99	84.347	ENSPTIG00000010789	LSG1	99	85.714	Panthera_tigris_altaica
ENSCATG00000042060	LSG1	100	94.216	ENSPTRG00000015760	LSG1	100	94.985	Pan_troglodytes
ENSCATG00000042060	LSG1	100	98.884	ENSPANG00000018249	LSG1	100	98.884	Papio_anubis
ENSCATG00000042060	LSG1	96	63.339	ENSPKIG00000002895	lsg1	100	64.759	Paramormyrops_kingsleyae
ENSCATG00000042060	LSG1	96	64.541	ENSPSIG00000009821	LSG1	99	65.163	Pelodiscus_sinensis
ENSCATG00000042060	LSG1	95	64.753	ENSPMGG00000000931	lsg1	99	65.446	Periophthalmus_magnuspinnatus
ENSCATG00000042060	LSG1	100	80.816	ENSPEMG00000012082	-	100	81.873	Peromyscus_maniculatus_bairdii
ENSCATG00000042060	LSG1	99	59.618	ENSPMAG00000007451	lsg1	99	60.499	Petromyzon_marinus
ENSCATG00000042060	LSG1	99	67.708	ENSPCIG00000013890	LSG1	82	67.708	Phascolarctos_cinereus
ENSCATG00000042060	LSG1	97	65.231	ENSPFOG00000021882	lsg1	99	66.617	Poecilia_formosa
ENSCATG00000042060	LSG1	97	64.154	ENSPLAG00000019536	lsg1	99	66.066	Poecilia_latipinna
ENSCATG00000042060	LSG1	97	64.670	ENSPMEG00000017281	lsg1	99	65.817	Poecilia_mexicana
ENSCATG00000042060	LSG1	97	54.795	ENSPREG00000006048	lsg1	99	56.721	Poecilia_reticulata
ENSCATG00000042060	LSG1	92	92.916	ENSPPYG00000014425	LSG1	100	93.904	Pongo_abelii
ENSCATG00000042060	LSG1	91	86.667	ENSPCAG00000005511	LSG1	90	86.667	Procavia_capensis
ENSCATG00000042060	LSG1	100	86.646	ENSPCOG00000012360	LSG1	100	88.164	Propithecus_coquereli
ENSCATG00000042060	LSG1	99	61.919	ENSPNYG00000021994	lsg1	99	64.048	Pundamilia_nyererei
ENSCATG00000042060	LSG1	99	64.458	ENSPNAG00000015533	lsg1	99	65.554	Pygocentrus_nattereri
ENSCATG00000042060	LSG1	100	81.297	ENSRNOG00000001727	Lsg1	100	82.655	Rattus_norvegicus
ENSCATG00000042060	LSG1	100	95.137	ENSRBIG00000029053	LSG1	100	97.112	Rhinopithecus_bieti
ENSCATG00000042060	LSG1	100	95.137	ENSRROG00000037702	LSG1	100	97.112	Rhinopithecus_roxellana
ENSCATG00000042060	LSG1	74	46.121	YGL099W	LSG1	74	46.983	Saccharomyces_cerevisiae
ENSCATG00000042060	LSG1	100	91.945	ENSSBOG00000034938	LSG1	100	93.617	Saimiri_boliviensis_boliviensis
ENSCATG00000042060	LSG1	79	67.429	ENSSHAG00000003487	LSG1	99	66.163	Sarcophilus_harrisii
ENSCATG00000042060	LSG1	98	63.833	ENSSFOG00015008955	lsg1	99	63.733	Scleropages_formosus
ENSCATG00000042060	LSG1	98	63.158	ENSSDUG00000004622	lsg1	99	64.392	Seriola_dumerili
ENSCATG00000042060	LSG1	98	62.848	ENSSLDG00000010869	lsg1	99	64.079	Seriola_lalandi_dorsalis
ENSCATG00000042060	LSG1	81	84.118	ENSSARG00000012981	LSG1	81	84.118	Sorex_araneus
ENSCATG00000042060	LSG1	99	66.366	ENSSPUG00000016347	LSG1	99	68.257	Sphenodon_punctatus
ENSCATG00000042060	LSG1	99	61.970	ENSSPAG00000005508	lsg1	99	63.636	Stegastes_partitus
ENSCATG00000042060	LSG1	99	82.979	ENSSSCG00000011827	LSG1	99	83.587	Sus_scrofa
ENSCATG00000042060	LSG1	89	62.857	ENSTGUG00000009068	LSG1	99	64.202	Taeniopygia_guttata
ENSCATG00000042060	LSG1	97	60.592	ENSTRUG00000017380	lsg1	99	59.909	Takifugu_rubripes
ENSCATG00000042060	LSG1	97	63.721	ENSTNIG00000015570	lsg1	99	64.307	Tetraodon_nigroviridis
ENSCATG00000042060	LSG1	91	93.220	ENSTTRG00000000559	LSG1	91	93.220	Tursiops_truncatus
ENSCATG00000042060	LSG1	99	82.675	ENSUAMG00000012454	LSG1	99	84.043	Ursus_americanus
ENSCATG00000042060	LSG1	99	82.675	ENSUMAG00000000855	LSG1	99	84.043	Ursus_maritimus
ENSCATG00000042060	LSG1	95	79.421	ENSVPAG00000012400	LSG1	99	81.120	Vicugna_pacos
ENSCATG00000042060	LSG1	95	82.560	ENSVVUG00000008956	LSG1	97	84.000	Vulpes_vulpes
ENSCATG00000042060	LSG1	99	64.662	ENSXETG00000003451	lsg1	99	66.052	Xenopus_tropicalis
ENSCATG00000042060	LSG1	97	64.706	ENSXCOG00000003239	lsg1	99	65.315	Xiphophorus_couchianus
ENSCATG00000042060	LSG1	97	64.596	ENSXMAG00000005536	lsg1	99	65.361	Xiphophorus_maculatus