EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000042064 (Gene tree)
Gene ID: 105584828
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 52920 bases
Position: chrKQ012808.1:3743103-3796022
Accession: 105584828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000038797	RRM_1	PF00076.22	1.5e-38	1	3
ENSCATP00000038797	RRM_1	PF00076.22	1.5e-38	2	3
ENSCATP00000038797	RRM_1	PF00076.22	1.5e-38	3	3
ENSCATP00000038792	RRM_1	PF00076.22	4.6e-38	1	3
ENSCATP00000038792	RRM_1	PF00076.22	4.6e-38	2	3
ENSCATP00000038792	RRM_1	PF00076.22	4.6e-38	3	3
ENSCATP00000038794	RRM_1	PF00076.22	7.1e-38	1	3
ENSCATP00000038794	RRM_1	PF00076.22	7.1e-38	2	3
ENSCATP00000038794	RRM_1	PF00076.22	7.1e-38	3	3
ENSCATP00000038789	RRM_1	PF00076.22	7.2e-38	1	3
ENSCATP00000038789	RRM_1	PF00076.22	7.2e-38	2	3
ENSCATP00000038789	RRM_1	PF00076.22	7.2e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000063101	RBM47-203	1764	XM_012057886	ENSCATP00000038794	587 (aa)	XP_011913276	A0A2K5NMN5
ENSCATT00000063099	RBM47-202	4206	XM_012057887	ENSCATP00000038792	524 (aa)	XP_011913277	A0A2K5NMU6
ENSCATT00000063096	RBM47-201	5877	XM_012057876	ENSCATP00000038789	593 (aa)	XP_011913266	A0A2K5NMN0
ENSCATT00000063104	RBM47-204	1182	-	ENSCATP00000038797	393 (aa)	-	A0A2K5NMV1

Gene Model

Click here to download ENSCATG00000042064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000042064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000042064	RBM47	77	74.172	ENSCATG00000040148	RBM46	64	74.172
ENSCATG00000042064	RBM47	81	55.108	ENSCATG00000035305	HNRNPR	84	40.220
ENSCATG00000042064	RBM47	87	68.300	ENSCATG00000043715	A1CF	78	58.407
ENSCATG00000042064	RBM47	77	55.049	ENSCATG00000034066	SYNCRIP	73	57.692
ENSCATG00000042064	RBM47	52	43.415	ENSCATG00000025088	DND1	58	43.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000042064	RBM47	100	99.831	ENSG00000163694	RBM47	100	100.000	Homo_sapiens
ENSCATG00000042064	RBM47	100	84.309	ENSAPOG00000011062	rbm47	100	81.383	Acanthochromis_polyacanthus
ENSCATG00000042064	RBM47	100	98.133	ENSAMEG00000009672	RBM47	100	96.477	Ailuropoda_melanoleuca
ENSCATG00000042064	RBM47	100	84.840	ENSACIG00000011531	rbm47	100	81.915	Amphilophus_citrinellus
ENSCATG00000042064	RBM47	100	84.309	ENSAOCG00000022245	rbm47	100	81.383	Amphiprion_ocellaris
ENSCATG00000042064	RBM47	100	81.633	ENSAPEG00000018304	rbm47	100	81.383	Amphiprion_percula
ENSCATG00000042064	RBM47	100	82.564	ENSATEG00000018400	rbm47	94	85.028	Anabas_testudineus
ENSCATG00000042064	RBM47	100	88.591	ENSAPLG00000013974	RBM47	100	87.584	Anas_platyrhynchos
ENSCATG00000042064	RBM47	100	86.167	ENSACAG00000011833	RBM47	100	85.667	Anolis_carolinensis
ENSCATG00000042064	RBM47	100	98.855	ENSANAG00000029440	RBM47	100	98.855	Aotus_nancymaae
ENSCATG00000042064	RBM47	100	82.687	ENSACLG00000016902	rbm47	95	85.311	Astatotilapia_calliptera
ENSCATG00000042064	RBM47	100	76.112	ENSAMXG00000021794	rbm47	95	84.078	Astyanax_mexicanus
ENSCATG00000042064	RBM47	100	97.124	ENSBTAG00000002356	RBM47	100	97.124	Bos_taurus
ENSCATG00000042064	RBM47	100	98.667	ENSCJAG00000019385	RBM47	100	98.667	Callithrix_jacchus
ENSCATG00000042064	RBM47	96	93.182	ENSCAFG00000015898	RBM47	100	93.456	Canis_familiaris
ENSCATG00000042064	RBM47	90	94.618	ENSCAFG00020010558	RBM47	94	94.695	Canis_lupus_dingo
ENSCATG00000042064	RBM47	100	97.462	ENSCHIG00000026214	RBM47	100	97.462	Capra_hircus
ENSCATG00000042064	RBM47	86	80.550	ENSTSYG00000033612	RBM47	93	89.823	Carlito_syrichta
ENSCATG00000042064	RBM47	100	87.731	ENSCAPG00000008426	RBM47	100	87.731	Cavia_aperea
ENSCATG00000042064	RBM47	100	97.067	ENSCPOG00000014100	RBM47	100	95.270	Cavia_porcellus
ENSCATG00000042064	RBM47	99	68.814	ENSCCAG00000024397	-	99	67.288	Cebus_capucinus
ENSCATG00000042064	RBM47	100	98.667	ENSCCAG00000030129	-	100	98.667	Cebus_capucinus
ENSCATG00000042064	RBM47	100	96.533	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSCATG00000042064	RBM47	100	100.000	ENSCSAG00000017060	RBM47	100	100.000	Chlorocebus_sabaeus
ENSCATG00000042064	RBM47	87	97.965	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSCATG00000042064	RBM47	100	93.085	ENSCPBG00000013831	RBM47	100	89.933	Chrysemys_picta_bellii
ENSCATG00000042064	RBM47	100	99.831	ENSCANG00000019997	RBM47	100	99.831	Colobus_angolensis_palliatus
ENSCATG00000042064	RBM47	100	94.444	ENSCGRG00001000623	-	100	92.953	Cricetulus_griseus_chok1gshd
ENSCATG00000042064	RBM47	100	87.879	ENSCGRG00001020102	-	100	87.500	Cricetulus_griseus_chok1gshd
ENSCATG00000042064	RBM47	100	87.500	ENSCGRG00000014760	-	100	87.121	Cricetulus_griseus_crigri
ENSCATG00000042064	RBM47	100	93.915	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSCATG00000042064	RBM47	95	83.069	ENSCSEG00000004545	rbm47	100	73.737	Cynoglossus_semilaevis
ENSCATG00000042064	RBM47	98	83.880	ENSCVAG00000020144	rbm47	100	81.117	Cyprinodon_variegatus
ENSCATG00000042064	RBM47	96	81.378	ENSDARG00000061985	rbm47	95	78.671	Danio_rerio
ENSCATG00000042064	RBM47	100	95.756	ENSDNOG00000046854	RBM47	100	95.756	Dasypus_novemcinctus
ENSCATG00000042064	RBM47	100	94.147	ENSDORG00000010144	Rbm47	100	93.980	Dipodomys_ordii
ENSCATG00000042064	RBM47	100	94.631	ENSETEG00000009194	RBM47	100	94.631	Echinops_telfairi
ENSCATG00000042064	RBM47	95	70.667	ENSEBUG00000011912	rbm47	95	75.145	Eptatretus_burgeri
ENSCATG00000042064	RBM47	100	97.462	ENSEASG00005008443	RBM47	100	97.462	Equus_asinus_asinus
ENSCATG00000042064	RBM47	100	97.462	ENSECAG00000004400	RBM47	100	97.462	Equus_caballus
ENSCATG00000042064	RBM47	76	96.537	ENSEEUG00000001194	RBM47	75	96.537	Erinaceus_europaeus
ENSCATG00000042064	RBM47	99	82.759	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSCATG00000042064	RBM47	100	97.284	ENSFCAG00000012399	RBM47	100	97.284	Felis_catus
ENSCATG00000042064	RBM47	100	90.117	ENSFALG00000002861	RBM47	100	90.620	Ficedula_albicollis
ENSCATG00000042064	RBM47	100	94.400	ENSFDAG00000016326	RBM47	100	93.390	Fukomys_damarensis
ENSCATG00000042064	RBM47	96	87.042	ENSFHEG00000007938	rbm47	100	74.831	Fundulus_heteroclitus
ENSCATG00000042064	RBM47	100	81.013	ENSGMOG00000014802	rbm47	94	84.358	Gadus_morhua
ENSCATG00000042064	RBM47	95	90.691	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSCATG00000042064	RBM47	96	82.632	ENSGAFG00000020571	rbm47	99	79.630	Gambusia_affinis
ENSCATG00000042064	RBM47	100	80.000	ENSGACG00000016223	rbm47	94	83.427	Gasterosteus_aculeatus
ENSCATG00000042064	RBM47	100	90.436	ENSGAGG00000020051	RBM47	100	90.101	Gopherus_agassizii
ENSCATG00000042064	RBM47	100	100.000	ENSGGOG00000001367	RBM47	100	100.000	Gorilla_gorilla
ENSCATG00000042064	RBM47	100	82.687	ENSHBUG00000003520	rbm47	95	85.311	Haplochromis_burtoni
ENSCATG00000042064	RBM47	100	74.857	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSCATG00000042064	RBM47	95	90.133	ENSHGLG00100003071	-	100	83.898	Heterocephalus_glaber_male
ENSCATG00000042064	RBM47	100	94.241	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSCATG00000042064	RBM47	95	84.309	ENSHCOG00000002074	rbm47	99	81.746	Hippocampus_comes
ENSCATG00000042064	RBM47	100	80.829	ENSIPUG00000004743	rbm47	97	84.659	Ictalurus_punctatus
ENSCATG00000042064	RBM47	100	96.958	ENSSTOG00000004727	RBM47	100	96.958	Ictidomys_tridecemlineatus
ENSCATG00000042064	RBM47	100	93.792	ENSJJAG00000013823	Rbm47	100	94.799	Jaculus_jaculus
ENSCATG00000042064	RBM47	100	84.433	ENSKMAG00000000084	rbm47	100	81.316	Kryptolebias_marmoratus
ENSCATG00000042064	RBM47	100	82.713	ENSLBEG00000008436	rbm47	100	80.585	Labrus_bergylta
ENSCATG00000042064	RBM47	100	88.298	ENSLACG00000007196	RBM47	100	85.135	Latimeria_chalumnae
ENSCATG00000042064	RBM47	100	82.910	ENSLOCG00000012966	rbm47	95	81.218	Lepisosteus_oculatus
ENSCATG00000042064	RBM47	100	96.800	ENSLAFG00000011998	RBM47	100	94.622	Loxodonta_africana
ENSCATG00000042064	RBM47	100	100.000	ENSMFAG00000037967	RBM47	100	100.000	Macaca_fascicularis
ENSCATG00000042064	RBM47	100	100.000	ENSMMUG00000012036	RBM47	100	100.000	Macaca_mulatta
ENSCATG00000042064	RBM47	100	99.831	ENSMNEG00000040774	RBM47	100	99.831	Macaca_nemestrina
ENSCATG00000042064	RBM47	100	100.000	ENSMLEG00000041432	RBM47	100	100.000	Mandrillus_leucophaeus
ENSCATG00000042064	RBM47	100	83.033	ENSMAMG00000019143	rbm47	95	85.028	Mastacembelus_armatus
ENSCATG00000042064	RBM47	100	82.687	ENSMZEG00005023659	rbm47	95	85.311	Maylandia_zebra
ENSCATG00000042064	RBM47	100	91.000	ENSMGAG00000012226	RBM47	100	90.333	Meleagris_gallopavo
ENSCATG00000042064	RBM47	100	93.456	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSCATG00000042064	RBM47	100	90.460	ENSMICG00000026417	RBM47	100	92.164	Microcebus_murinus
ENSCATG00000042064	RBM47	100	93.782	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSCATG00000042064	RBM47	100	81.395	ENSMMOG00000007260	rbm47	95	83.989	Mola_mola
ENSCATG00000042064	RBM47	79	81.073	ENSMODG00000015426	-	97	80.064	Monodelphis_domestica
ENSCATG00000042064	RBM47	100	81.980	ENSMODG00000020561	-	100	81.431	Monodelphis_domestica
ENSCATG00000042064	RBM47	100	92.800	ENSMODG00000007003	RBM47	100	91.246	Monodelphis_domestica
ENSCATG00000042064	RBM47	100	83.245	ENSMALG00000005167	rbm47	100	81.383	Monopterus_albus
ENSCATG00000042064	RBM47	100	93.445	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.671	Mus_caroli
ENSCATG00000042064	RBM47	100	93.782	ENSMUSG00000070780	Rbm47	100	93.782	Mus_musculus
ENSCATG00000042064	RBM47	100	93.782	MGP_PahariEiJ_G0017040	Rbm47	100	94.304	Mus_pahari
ENSCATG00000042064	RBM47	100	93.729	MGP_SPRETEiJ_G0028253	Rbm47	100	93.729	Mus_spretus
ENSCATG00000042064	RBM47	100	97.475	ENSMPUG00000006177	RBM47	94	97.475	Mustela_putorius_furo
ENSCATG00000042064	RBM47	100	93.401	ENSMLUG00000000889	RBM47	100	92.724	Myotis_lucifugus
ENSCATG00000042064	RBM47	100	94.118	ENSNGAG00000003325	Rbm47	100	94.286	Nannospalax_galili
ENSCATG00000042064	RBM47	100	82.946	ENSNBRG00000015092	rbm47	95	85.112	Neolamprologus_brichardi
ENSCATG00000042064	RBM47	100	99.663	ENSNLEG00000017151	RBM47	100	99.663	Nomascus_leucogenys
ENSCATG00000042064	RBM47	91	93.855	ENSMEUG00000009516	-	99	87.264	Notamacropus_eugenii
ENSCATG00000042064	RBM47	85	97.083	ENSOPRG00000016507	-	75	97.083	Ochotona_princeps
ENSCATG00000042064	RBM47	100	96.800	ENSODEG00000004873	RBM47	100	95.601	Octodon_degus
ENSCATG00000042064	RBM47	100	81.795	ENSONIG00000009061	rbm47	94	84.551	Oreochromis_niloticus
ENSCATG00000042064	RBM47	100	87.059	ENSOANG00000008978	RBM47	100	88.067	Ornithorhynchus_anatinus
ENSCATG00000042064	RBM47	100	95.431	ENSOCUG00000012034	RBM47	100	95.431	Oryctolagus_cuniculus
ENSCATG00000042064	RBM47	100	84.840	ENSORLG00000005847	rbm47	100	80.902	Oryzias_latipes
ENSCATG00000042064	RBM47	100	84.840	ENSORLG00020005154	rbm47	100	80.902	Oryzias_latipes_hni
ENSCATG00000042064	RBM47	100	85.106	ENSORLG00015000066	rbm47	100	81.167	Oryzias_latipes_hsok
ENSCATG00000042064	RBM47	100	84.840	ENSOMEG00000010730	rbm47	100	81.117	Oryzias_melastigma
ENSCATG00000042064	RBM47	100	97.475	ENSOGAG00000029367	-	100	97.475	Otolemur_garnettii
ENSCATG00000042064	RBM47	100	89.867	ENSOGAG00000025193	-	100	87.606	Otolemur_garnettii
ENSCATG00000042064	RBM47	100	93.421	ENSOARG00000012711	RBM47	100	89.112	Ovis_aries
ENSCATG00000042064	RBM47	100	99.831	ENSPPAG00000029763	RBM47	100	99.831	Pan_paniscus
ENSCATG00000042064	RBM47	100	94.228	ENSPPRG00000012873	RBM47	100	94.228	Panthera_pardus
ENSCATG00000042064	RBM47	85	91.984	ENSPTIG00000017046	RBM47	100	90.581	Panthera_tigris_altaica
ENSCATG00000042064	RBM47	100	100.000	ENSPTRG00000016006	RBM47	100	100.000	Pan_troglodytes
ENSCATG00000042064	RBM47	100	100.000	ENSPANG00000005980	RBM47	100	100.000	Papio_anubis
ENSCATG00000042064	RBM47	90	85.836	ENSPKIG00000005037	rbm47	95	84.225	Paramormyrops_kingsleyae
ENSCATG00000042064	RBM47	95	83.690	ENSPKIG00000013431	RBM47	92	86.119	Paramormyrops_kingsleyae
ENSCATG00000042064	RBM47	95	92.819	ENSPSIG00000017516	RBM47	97	90.530	Pelodiscus_sinensis
ENSCATG00000042064	RBM47	95	83.422	ENSPMGG00000018540	rbm47	100	75.169	Periophthalmus_magnuspinnatus
ENSCATG00000042064	RBM47	100	94.118	ENSPEMG00000011088	Rbm47	100	94.454	Peromyscus_maniculatus_bairdii
ENSCATG00000042064	RBM47	91	86.313	ENSPFOG00000007997	rbm47	94	82.778	Poecilia_formosa
ENSCATG00000042064	RBM47	95	83.511	ENSPLAG00000002072	rbm47	100	80.481	Poecilia_latipinna
ENSCATG00000042064	RBM47	96	87.042	ENSPMEG00000017492	rbm47	100	80.319	Poecilia_mexicana
ENSCATG00000042064	RBM47	96	87.042	ENSPREG00000008456	rbm47	100	80.749	Poecilia_reticulata
ENSCATG00000042064	RBM47	98	85.932	ENSPPYG00000014688	RBM47	98	84.682	Pongo_abelii
ENSCATG00000042064	RBM47	96	97.354	ENSPCAG00000011879	RBM47	81	97.500	Procavia_capensis
ENSCATG00000042064	RBM47	100	93.039	ENSPCOG00000023451	RBM47	100	93.718	Propithecus_coquereli
ENSCATG00000042064	RBM47	100	95.805	ENSPVAG00000003812	RBM47	100	95.805	Pteropus_vampyrus
ENSCATG00000042064	RBM47	100	82.687	ENSPNYG00000022868	rbm47	95	84.831	Pundamilia_nyererei
ENSCATG00000042064	RBM47	100	76.771	ENSPNAG00000007940	rbm47	95	84.637	Pygocentrus_nattereri
ENSCATG00000042064	RBM47	100	93.782	ENSRNOG00000002408	Rbm47	100	93.782	Rattus_norvegicus
ENSCATG00000042064	RBM47	100	99.831	ENSRBIG00000039601	RBM47	100	99.831	Rhinopithecus_bieti
ENSCATG00000042064	RBM47	100	99.831	ENSRROG00000044696	RBM47	100	99.831	Rhinopithecus_roxellana
ENSCATG00000042064	RBM47	100	96.947	ENSSBOG00000028475	RBM47	100	98.551	Saimiri_boliviensis_boliviensis
ENSCATG00000042064	RBM47	100	93.067	ENSSHAG00000017576	RBM47	100	91.864	Sarcophilus_harrisii
ENSCATG00000042064	RBM47	96	81.026	ENSSFOG00015012445	rbm47	94	80.800	Scleropages_formosus
ENSCATG00000042064	RBM47	98	78.238	ENSSFOG00015024101	RBM47	97	76.440	Scleropages_formosus
ENSCATG00000042064	RBM47	100	80.769	ENSSMAG00000009744	rbm47	94	82.486	Scophthalmus_maximus
ENSCATG00000042064	RBM47	100	81.061	ENSSDUG00000022684	rbm47	100	81.649	Seriola_dumerili
ENSCATG00000042064	RBM47	100	80.808	ENSSLDG00000003109	rbm47	100	81.383	Seriola_lalandi_dorsalis
ENSCATG00000042064	RBM47	95	95.251	ENSSARG00000001735	RBM47	75	95.759	Sorex_araneus
ENSCATG00000042064	RBM47	100	88.494	ENSSPUG00000007515	RBM47	100	91.176	Sphenodon_punctatus
ENSCATG00000042064	RBM47	100	82.653	ENSSPAG00000001257	rbm47	100	82.181	Stegastes_partitus
ENSCATG00000042064	RBM47	100	96.954	ENSSSCG00000008796	RBM47	100	96.954	Sus_scrofa
ENSCATG00000042064	RBM47	100	89.447	ENSTGUG00000008705	RBM47	100	89.950	Taeniopygia_guttata
ENSCATG00000042064	RBM47	95	83.690	ENSTRUG00000014050	rbm47	98	84.746	Takifugu_rubripes
ENSCATG00000042064	RBM47	100	81.654	ENSTNIG00000006127	rbm47	95	84.551	Tetraodon_nigroviridis
ENSCATG00000042064	RBM47	95	90.909	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSCATG00000042064	RBM47	100	96.944	ENSTTRG00000002839	RBM47	100	96.944	Tursiops_truncatus
ENSCATG00000042064	RBM47	100	96.970	ENSUAMG00000021346	RBM47	100	96.970	Ursus_americanus
ENSCATG00000042064	RBM47	57	98.630	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSCATG00000042064	RBM47	96	94.718	ENSVVUG00000014774	RBM47	100	93.919	Vulpes_vulpes
ENSCATG00000042064	RBM47	100	85.329	ENSXETG00000012802	rbm47	100	84.823	Xenopus_tropicalis
ENSCATG00000042064	RBM47	95	83.245	ENSXCOG00000000780	rbm47	100	80.481	Xiphophorus_couchianus
ENSCATG00000042064	RBM47	100	83.245	ENSXMAG00000009874	rbm47	100	80.053	Xiphophorus_maculatus