EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCATG00000042164 (Gene tree)
Gene ID
105594721
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Cercocebus_atys
Status
putative
Strand
Plus strand
Length
15972 bases
Position
chrKQ010561.1:7499737-7515708
Accession
105594721
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCATP00000039033PABPPF00658.182.5e-3111
ENSCATP00000039032PABPPF00658.182.9e-3111
ENSCATP00000039037PABPPF00658.182.9e-3111
ENSCATP00000039033RRM_5PF13893.68.7e-0911
ENSCATP00000039032RRM_5PF13893.61.1e-0811
ENSCATP00000039033RRM_1PF00076.221.1e-9114
ENSCATP00000039033RRM_1PF00076.221.1e-9124
ENSCATP00000039033RRM_1PF00076.221.1e-9134
ENSCATP00000039033RRM_1PF00076.221.1e-9144
ENSCATP00000039032RRM_1PF00076.221.4e-9114
ENSCATP00000039032RRM_1PF00076.221.4e-9124
ENSCATP00000039032RRM_1PF00076.221.4e-9134
ENSCATP00000039032RRM_1PF00076.221.4e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCATT00000063346PABPC4-203786-ENSCATP00000039037261 (aa)-A0A2K5NNJ6
ENSCATT00000063342PABPC4-2023106XM_012079346ENSCATP00000039033631 (aa)XP_011934736A0A2K5NNC3
ENSCATT00000063341PABPC4-2013193XM_012079344ENSCATP00000039032660 (aa)XP_011934734A0A2K5NNJ0
Gene Model
Click here to download ENSCATG00000042164's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000042164's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCATG00000042164PABPC46030.605ENSCATG00000032090ELAVL19430.605
ENSCATG00000042164PABPC49978.627ENSCATG00000039184PABPC19978.471
ENSCATG00000042164PABPC49973.750ENSCATG00000029313PABPC39973.906
ENSCATG00000042164PABPC45931.579ENSCATG00000012522ELAVL28634.940
ENSCATG00000042164PABPC45730.769ENSCATG00000043838TIAL17730.220
ENSCATG00000042164PABPC46067.135ENSCATG00000043083PABPC59666.942
ENSCATG00000042164PABPC49866.989ENSCATG00000034065PABPC1L9967.846
ENSCATG00000042164PABPC45837.500ENSCATG00000032144CELF26137.500
ENSCATG00000042164PABPC45830.952ENSCATG00000029867ELAVL48830.921
ENSCATG00000042164PABPC45876.650ENSCATG00000043125-9976.650
ENSCATG00000042164PABPC48279.208ENSCATG00000045341-9879.208
ENSCATG00000042164PABPC46034.722ENSCATG00000044086ELAVL39233.735
ENSCATG00000042164PABPC49966.983ENSCATG00000044984-9970.270
ENSCATG00000042164PABPC45940.000ENSCATG00000017832RBM236340.506
ENSCATG00000042164PABPC45876.650ENSCATG00000042826-9976.650
ENSCATG00000042164PABPC45431.481ENSCATG00000021167HNRNPA05032.450
ENSCATG00000042164PABPC45730.189ENSCATG00000041446TIA18530.189
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCATG00000042164PABPC410099.848ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCATG00000042164PABPC49983.360ENSAPOG00000001161pabpc410082.453Acanthochromis_polyacanthus
ENSCATG00000042164PABPC410099.091ENSAMEG00000011535-10099.091Ailuropoda_melanoleuca
ENSCATG00000042164PABPC49857.717ENSAMEG00000015083-9957.395Ailuropoda_melanoleuca
ENSCATG00000042164PABPC410083.594ENSACIG00000023343pabpc410084.219Amphilophus_citrinellus
ENSCATG00000042164PABPC49983.518ENSAOCG00000021529pabpc410090.807Amphiprion_ocellaris
ENSCATG00000042164PABPC49983.518ENSAPEG00000019196pabpc410083.750Amphiprion_percula
ENSCATG00000042164PABPC49982.622ENSATEG00000007402pabpc410082.426Anabas_testudineus
ENSCATG00000042164PABPC49991.429ENSAPLG00000009729-10091.429Anas_platyrhynchos
ENSCATG00000042164PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSCATG00000042164PABPC410099.697ENSANAG00000025079PABPC410099.697Aotus_nancymaae
ENSCATG00000042164PABPC410083.125ENSACLG00000019558pabpc410083.204Astatotilapia_calliptera
ENSCATG00000042164PABPC49978.922ENSAMXG00000018779pabpc49979.556Astyanax_mexicanus
ENSCATG00000042164PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSCATG00000042164PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSCATG00000042164PABPC47790.164ENSCJAG00000045953-9290.123Callithrix_jacchus
ENSCATG00000042164PABPC410099.545ENSCJAG00000002512-10099.545Callithrix_jacchus
ENSCATG00000042164PABPC410099.366ENSCAFG00000003081PABPC410099.366Canis_familiaris
ENSCATG00000042164PABPC410099.242ENSCAFG00020004161PABPC410099.242Canis_lupus_dingo
ENSCATG00000042164PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSCATG00000042164PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSCATG00000042164PABPC410099.545ENSTSYG00000006532PABPC410099.545Carlito_syrichta
ENSCATG00000042164PABPC49999.544ENSCAPG00000015984PABPC410099.544Cavia_aperea
ENSCATG00000042164PABPC410099.545ENSCPOG00000009552PABPC410099.545Cavia_porcellus
ENSCATG00000042164PABPC410099.697ENSCCAG00000037306PABPC410099.697Cebus_capucinus
ENSCATG00000042164PABPC410099.242ENSCLAG00000011899PABPC410099.242Chinchilla_lanigera
ENSCATG00000042164PABPC4100100.000ENSCSAG00000001135PABPC4100100.000Chlorocebus_sabaeus
ENSCATG00000042164PABPC48697.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSCATG00000042164PABPC49991.746ENSCPBG00000001038PABPC410091.746Chrysemys_picta_bellii
ENSCATG00000042164PABPC49999.846ENSCANG00000034177PABPC410099.846Colobus_angolensis_palliatus
ENSCATG00000042164PABPC410097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSCATG00000042164PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSCATG00000042164PABPC410082.344ENSCSEG00000000130pabpc410082.426Cynoglossus_semilaevis
ENSCATG00000042164PABPC49983.625ENSCVAG00000019246pabpc410083.861Cyprinodon_variegatus
ENSCATG00000042164PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSCATG00000042164PABPC47764.000ENSDNOG00000046918-10064.000Dasypus_novemcinctus
ENSCATG00000042164PABPC49999.643ENSDNOG00000018444-10099.643Dasypus_novemcinctus
ENSCATG00000042164PABPC47764.179ENSDNOG00000042887-10064.179Dasypus_novemcinctus
ENSCATG00000042164PABPC410097.121ENSDORG00000011581Pabpc410097.121Dipodomys_ordii
ENSCATG00000042164PABPC48665.370ENSETEG00000009172-9965.385Echinops_telfairi
ENSCATG00000042164PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCATG00000042164PABPC49776.898ENSEBUG00000013782pabpc49976.108Eptatretus_burgeri
ENSCATG00000042164PABPC49976.582ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSCATG00000042164PABPC410099.697ENSEASG00005014119PABPC410099.697Equus_asinus_asinus
ENSCATG00000042164PABPC410099.697ENSECAG00000009396PABPC410099.697Equus_caballus
ENSCATG00000042164PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSCATG00000042164PABPC49983.599ENSELUG00000003195pabpc49884.177Esox_lucius
ENSCATG00000042164PABPC410099.394ENSFCAG00000015254-10099.394Felis_catus
ENSCATG00000042164PABPC49990.952ENSFALG00000000543PABPC410090.952Ficedula_albicollis
ENSCATG00000042164PABPC49566.935ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSCATG00000042164PABPC410099.545ENSFDAG00000020016-10099.545Fukomys_damarensis
ENSCATG00000042164PABPC410083.412ENSFHEG00000007548pabpc49688.578Fundulus_heteroclitus
ENSCATG00000042164PABPC49982.965ENSGMOG00000019025pabpc49983.596Gadus_morhua
ENSCATG00000042164PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSCATG00000042164PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCATG00000042164PABPC410081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSCATG00000042164PABPC49991.587ENSGAGG00000001888PABPC410091.587Gopherus_agassizii
ENSCATG00000042164PABPC410099.848ENSGGOG00000004002PABPC410099.848Gorilla_gorilla
ENSCATG00000042164PABPC47585.354ENSGGOG00000039139-9185.354Gorilla_gorilla
ENSCATG00000042164PABPC410083.281ENSHBUG00000020206pabpc410083.359Haplochromis_burtoni
ENSCATG00000042164PABPC410099.697ENSHGLG00000011162PABPC410099.697Heterocephalus_glaber_female
ENSCATG00000042164PABPC410099.683ENSHGLG00100001580PABPC410099.683Heterocephalus_glaber_male
ENSCATG00000042164PABPC410082.316ENSHCOG00000012694pabpc410082.942Hippocampus_comes
ENSCATG00000042164PABPC49883.146ENSIPUG00000016620pabpc49983.176Ictalurus_punctatus
ENSCATG00000042164PABPC410097.121ENSSTOG00000010416PABPC410097.121Ictidomys_tridecemlineatus
ENSCATG00000042164PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSCATG00000042164PABPC49982.677ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSCATG00000042164PABPC410082.582ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSCATG00000042164PABPC49988.170ENSLACG00000011907PABPC410088.170Latimeria_chalumnae
ENSCATG00000042164PABPC49985.512ENSLOCG00000001877pabpc49986.299Lepisosteus_oculatus
ENSCATG00000042164PABPC410099.242ENSLAFG00000000151PABPC410099.242Loxodonta_africana
ENSCATG00000042164PABPC4100100.000ENSMFAG00000041481PABPC4100100.000Macaca_fascicularis
ENSCATG00000042164PABPC4100100.000ENSMMUG00000007497PABPC4100100.000Macaca_mulatta
ENSCATG00000042164PABPC410099.848ENSMNEG00000043054PABPC410099.848Macaca_nemestrina
ENSCATG00000042164PABPC4100100.000ENSMLEG00000040716PABPC4100100.000Mandrillus_leucophaeus
ENSCATG00000042164PABPC49983.201ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSCATG00000042164PABPC410082.969ENSMZEG00005006141pabpc410083.048Maylandia_zebra
ENSCATG00000042164PABPC49987.905ENSMGAG00000005408PABPC410087.905Meleagris_gallopavo
ENSCATG00000042164PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSCATG00000042164PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCATG00000042164PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSCATG00000042164PABPC48996.619ENSMICG00000016633-10096.619Microcebus_murinus
ENSCATG00000042164PABPC49984.725ENSMICG00000036729-10085.435Microcebus_murinus
ENSCATG00000042164PABPC410097.892ENSMOCG00000006763Pabpc410097.892Microtus_ochrogaster
ENSCATG00000042164PABPC410080.346ENSMMOG00000002363pabpc49979.507Mola_mola
ENSCATG00000042164PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSCATG00000042164PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSCATG00000042164PABPC49982.780ENSMALG00000011017pabpc410082.326Monopterus_albus
ENSCATG00000042164PABPC49983.898MGP_CAROLIEiJ_G0024864-10083.898Mus_caroli
ENSCATG00000042164PABPC410097.576MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCATG00000042164PABPC410098.030ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCATG00000042164PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCATG00000042164PABPC49597.189MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCATG00000042164PABPC49553.808ENSMPUG00000006836-10053.642Mustela_putorius_furo
ENSCATG00000042164PABPC410099.394ENSMPUG00000014414-10099.394Mustela_putorius_furo
ENSCATG00000042164PABPC410096.672ENSMLUG00000012068PABPC410096.672Myotis_lucifugus
ENSCATG00000042164PABPC410096.970ENSNGAG00000018292Pabpc410096.970Nannospalax_galili
ENSCATG00000042164PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSCATG00000042164PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCATG00000042164PABPC4100100.000ENSNLEG00000011928PABPC4100100.000Nomascus_leucogenys
ENSCATG00000042164PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSCATG00000042164PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSCATG00000042164PABPC48883.478ENSODEG00000013825-10083.478Octodon_degus
ENSCATG00000042164PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSCATG00000042164PABPC410098.636ENSODEG00000006592-10098.636Octodon_degus
ENSCATG00000042164PABPC410083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSCATG00000042164PABPC49991.429ENSOANG00000010001PABPC410091.429Ornithorhynchus_anatinus
ENSCATG00000042164PABPC49699.367ENSOCUG00000000562PABPC48899.367Oryctolagus_cuniculus
ENSCATG00000042164PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSCATG00000042164PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSCATG00000042164PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSCATG00000042164PABPC49983.201ENSOMEG00000014410pabpc49983.648Oryzias_melastigma
ENSCATG00000042164PABPC410096.983ENSOGAG00000004067PABPC410096.983Otolemur_garnettii
ENSCATG00000042164PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSCATG00000042164PABPC410099.848ENSPPAG00000043625PABPC410099.848Pan_paniscus
ENSCATG00000042164PABPC410099.394ENSPPRG00000024727PABPC410099.394Panthera_pardus
ENSCATG00000042164PABPC410099.394ENSPTIG00000005829PABPC410099.394Panthera_tigris_altaica
ENSCATG00000042164PABPC410099.848ENSPTRG00000000573PABPC410099.848Pan_troglodytes
ENSCATG00000042164PABPC410099.848ENSPANG00000009484PABPC410099.848Papio_anubis
ENSCATG00000042164PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSCATG00000042164PABPC49991.746ENSPSIG00000016892PABPC410091.746Pelodiscus_sinensis
ENSCATG00000042164PABPC410081.732ENSPMGG00000009073pabpc49981.476Periophthalmus_magnuspinnatus
ENSCATG00000042164PABPC410091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSCATG00000042164PABPC410097.424ENSPEMG00000023569-9997.424Peromyscus_maniculatus_bairdii
ENSCATG00000042164PABPC48973.484ENSPMAG00000002836pabpc410073.196Petromyzon_marinus
ENSCATG00000042164PABPC49571.311ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSCATG00000042164PABPC49794.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSCATG00000042164PABPC410082.786ENSPFOG00000002682pabpc410082.919Poecilia_formosa
ENSCATG00000042164PABPC410082.629ENSPLAG00000010112pabpc410083.333Poecilia_latipinna
ENSCATG00000042164PABPC49983.307ENSPMEG00000019739pabpc410083.075Poecilia_mexicana
ENSCATG00000042164PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSCATG00000042164PABPC410099.848ENSPPYG00000001506PABPC410099.848Pongo_abelii
ENSCATG00000042164PABPC410094.394ENSPCAG00000003341PABPC410094.394Procavia_capensis
ENSCATG00000042164PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSCATG00000042164PABPC410099.697ENSPCOG00000023725-10099.697Propithecus_coquereli
ENSCATG00000042164PABPC49998.824ENSPVAG00000002187PABPC410098.824Pteropus_vampyrus
ENSCATG00000042164PABPC410083.125ENSPNYG00000006134pabpc410083.204Pundamilia_nyererei
ENSCATG00000042164PABPC410083.412ENSPNAG00000024355pabpc410084.038Pygocentrus_nattereri
ENSCATG00000042164PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSCATG00000042164PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSCATG00000042164PABPC4100100.000ENSRBIG00000039761PABPC4100100.000Rhinopithecus_bieti
ENSCATG00000042164PABPC4100100.000ENSRROG00000033355PABPC4100100.000Rhinopithecus_roxellana
ENSCATG00000042164PABPC410099.545ENSSBOG00000026193PABPC410099.545Saimiri_boliviensis_boliviensis
ENSCATG00000042164PABPC49892.718ENSSHAG00000018139PABPC410092.222Sarcophilus_harrisii
ENSCATG00000042164PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSCATG00000042164PABPC49982.753ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSCATG00000042164PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSCATG00000042164PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSCATG00000042164PABPC49597.189ENSSARG00000000310PABPC410092.121Sorex_araneus
ENSCATG00000042164PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSCATG00000042164PABPC49990.562ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSCATG00000042164PABPC49547.809ENSSSCG00000036170-9650.337Sus_scrofa
ENSCATG00000042164PABPC410099.242ENSSSCG00000003660-10099.242Sus_scrofa
ENSCATG00000042164PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSCATG00000042164PABPC410082.075ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSCATG00000042164PABPC410078.213ENSTNIG00000016902pabpc49978.213Tetraodon_nigroviridis
ENSCATG00000042164PABPC49597.590ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSCATG00000042164PABPC49597.590ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSCATG00000042164PABPC410099.208ENSUAMG00000000303PABPC410099.208Ursus_americanus
ENSCATG00000042164PABPC410099.091ENSUMAG00000019585PABPC410099.107Ursus_maritimus
ENSCATG00000042164PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSCATG00000042164PABPC410099.366ENSVVUG00000005215PABPC410099.366Vulpes_vulpes
ENSCATG00000042164PABPC49983.492ENSXETG00000010946pabpc410083.492Xenopus_tropicalis
ENSCATG00000042164PABPC45997.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCATG00000042164PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSCATG00000042164PABPC410082.942ENSXMAG00000019007pabpc410083.178Xiphophorus_maculatus

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