EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000043083 (Gene tree)
Gene ID: 105594291
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrKQ010513.1:3262024-3263172
Accession: 105594291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000040974	RRM_5	PF13893.6	5.4e-13	1	2
ENSCATP00000040974	RRM_5	PF13893.6	5.4e-13	2	2
ENSCATP00000040974	RRM_1	PF00076.22	3.8e-77	1	4
ENSCATP00000040974	RRM_1	PF00076.22	3.8e-77	2	4
ENSCATP00000040974	RRM_1	PF00076.22	3.8e-77	3	4
ENSCATP00000040974	RRM_1	PF00076.22	3.8e-77	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000065336	PABPC5-201	1149	XM_012078187	ENSCATP00000040974	382 (aa)	XP_011933577	A0A2K5NTW8

Gene Model

Click here to download ENSCATG00000043083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000043083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000043083	PABPC5	94	49.383	ENSCATG00000045341	-	70	48.725
ENSCATG00000043083	PABPC5	94	35.802	ENSCATG00000012522	ELAVL2	88	35.802
ENSCATG00000043083	PABPC5	64	30.357	ENSCATG00000044617	TRNAU1AP	55	30.061
ENSCATG00000043083	PABPC5	96	66.942	ENSCATG00000042164	PABPC4	60	67.135
ENSCATG00000043083	PABPC5	93	59.694	ENSCATG00000043125	-	98	59.375
ENSCATG00000043083	PABPC5	96	59.504	ENSCATG00000034065	PABPC1L	61	59.551
ENSCATG00000043083	PABPC5	96	53.804	ENSCATG00000044984	-	71	54.335
ENSCATG00000043083	PABPC5	98	64.420	ENSCATG00000039184	PABPC1	58	65.449
ENSCATG00000043083	PABPC5	96	61.983	ENSCATG00000029313	PABPC3	58	62.079
ENSCATG00000043083	PABPC5	93	59.694	ENSCATG00000042826	-	98	59.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000043083	PABPC5	100	99.738	ENSG00000174740	PABPC5	100	99.738	Homo_sapiens
ENSCATG00000043083	PABPC5	99	97.375	ENSAMEG00000020114	PABPC5	100	97.375	Ailuropoda_melanoleuca
ENSCATG00000043083	PABPC5	100	99.738	ENSANAG00000005063	PABPC5	100	99.738	Aotus_nancymaae
ENSCATG00000043083	PABPC5	99	96.588	ENSBTAG00000019942	PABPC5	99	96.588	Bos_taurus
ENSCATG00000043083	PABPC5	100	99.215	ENSCJAG00000003665	PABPC5	100	99.215	Callithrix_jacchus
ENSCATG00000043083	PABPC5	99	96.850	ENSCAFG00000017452	PABPC5	99	96.850	Canis_familiaris
ENSCATG00000043083	PABPC5	99	96.588	ENSCHIG00000019004	PABPC5	99	96.588	Capra_hircus
ENSCATG00000043083	PABPC5	99	97.638	ENSTSYG00000036351	PABPC5	99	97.638	Carlito_syrichta
ENSCATG00000043083	PABPC5	99	88.421	ENSCAPG00000010714	PABPC5	99	88.421	Cavia_aperea
ENSCATG00000043083	PABPC5	99	94.488	ENSCPOG00000002555	PABPC5	99	94.488	Cavia_porcellus
ENSCATG00000043083	PABPC5	100	99.738	ENSCCAG00000032154	PABPC5	100	99.738	Cebus_capucinus
ENSCATG00000043083	PABPC5	99	95.801	ENSCLAG00000000647	PABPC5	99	95.801	Chinchilla_lanigera
ENSCATG00000043083	PABPC5	100	100.000	ENSCSAG00000000065	PABPC5	100	100.000	Chlorocebus_sabaeus
ENSCATG00000043083	PABPC5	100	100.000	ENSCANG00000011473	PABPC5	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000043083	PABPC5	99	94.488	ENSCGRG00000018699	Pabpc5	99	94.488	Cricetulus_griseus_crigri
ENSCATG00000043083	PABPC5	99	78.534	ENSETEG00000011832	PABPC5	99	78.534	Echinops_telfairi
ENSCATG00000043083	PABPC5	99	97.375	ENSEASG00005014396	PABPC5	99	97.375	Equus_asinus_asinus
ENSCATG00000043083	PABPC5	99	97.375	ENSECAG00000003452	PABPC5	99	97.375	Equus_caballus
ENSCATG00000043083	PABPC5	99	97.113	ENSFCAG00000004998	PABPC5	99	97.113	Felis_catus
ENSCATG00000043083	PABPC5	99	96.325	ENSFDAG00000000126	PABPC5	99	96.325	Fukomys_damarensis
ENSCATG00000043083	PABPC5	100	99.738	ENSGGOG00000007622	PABPC5	100	99.738	Gorilla_gorilla
ENSCATG00000043083	PABPC5	95	97.235	ENSJJAG00000011960	Pabpc5	99	97.235	Jaculus_jaculus
ENSCATG00000043083	PABPC5	100	100.000	ENSMFAG00000024561	PABPC5	100	100.000	Macaca_fascicularis
ENSCATG00000043083	PABPC5	100	100.000	ENSMMUG00000011562	PABPC5	100	100.000	Macaca_mulatta
ENSCATG00000043083	PABPC5	100	100.000	ENSMNEG00000037604	PABPC5	100	100.000	Macaca_nemestrina
ENSCATG00000043083	PABPC5	100	100.000	ENSMLEG00000028318	PABPC5	100	100.000	Mandrillus_leucophaeus
ENSCATG00000043083	PABPC5	99	96.325	ENSMICG00000041706	PABPC5	99	96.325	Microcebus_murinus
ENSCATG00000043083	PABPC5	99	95.801	ENSMOCG00000001554	Pabpc5	99	95.801	Microtus_ochrogaster
ENSCATG00000043083	PABPC5	99	94.723	MGP_CAROLIEiJ_G0033367	Pabpc5	99	94.723	Mus_caroli
ENSCATG00000043083	PABPC5	99	95.251	ENSMUSG00000034732	Pabpc5	99	95.251	Mus_musculus
ENSCATG00000043083	PABPC5	99	95.538	MGP_PahariEiJ_G0031908	Pabpc5	99	95.538	Mus_pahari
ENSCATG00000043083	PABPC5	99	95.251	MGP_SPRETEiJ_G0034533	Pabpc5	99	95.251	Mus_spretus
ENSCATG00000043083	PABPC5	99	96.588	ENSMPUG00000018465	PABPC5	99	96.588	Mustela_putorius_furo
ENSCATG00000043083	PABPC5	99	96.063	ENSMLUG00000008244	PABPC5	99	96.063	Myotis_lucifugus
ENSCATG00000043083	PABPC5	95	96.313	ENSNGAG00000004371	Pabpc5	99	96.313	Nannospalax_galili
ENSCATG00000043083	PABPC5	100	99.738	ENSNLEG00000035086	PABPC5	100	99.738	Nomascus_leucogenys
ENSCATG00000043083	PABPC5	98	97.285	ENSOPRG00000000856	PABPC5	100	97.285	Ochotona_princeps
ENSCATG00000043083	PABPC5	99	97.638	ENSOCUG00000010919	PABPC5	99	97.638	Oryctolagus_cuniculus
ENSCATG00000043083	PABPC5	99	96.850	ENSOGAG00000006882	PABPC5	99	96.850	Otolemur_garnettii
ENSCATG00000043083	PABPC5	99	96.850	ENSOARG00000010260	PABPC5	99	96.850	Ovis_aries
ENSCATG00000043083	PABPC5	100	99.476	ENSPPAG00000007378	PABPC5	100	99.476	Pan_paniscus
ENSCATG00000043083	PABPC5	99	97.113	ENSPPRG00000010742	PABPC5	99	97.113	Panthera_pardus
ENSCATG00000043083	PABPC5	99	97.113	ENSPTIG00000001480	PABPC5	99	97.113	Panthera_tigris_altaica
ENSCATG00000043083	PABPC5	100	99.738	ENSPTRG00000022078	PABPC5	100	99.738	Pan_troglodytes
ENSCATG00000043083	PABPC5	100	100.000	ENSPANG00000018282	PABPC5	100	100.000	Papio_anubis
ENSCATG00000043083	PABPC5	99	95.276	ENSPEMG00000000171	Pabpc5	99	95.276	Peromyscus_maniculatus_bairdii
ENSCATG00000043083	PABPC5	100	99.738	ENSPPYG00000020526	PABPC5	100	99.738	Pongo_abelii
ENSCATG00000043083	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSCATG00000043083	PABPC5	99	97.113	ENSPCOG00000000676	PABPC5	99	97.113	Propithecus_coquereli
ENSCATG00000043083	PABPC5	99	97.113	ENSPVAG00000006465	PABPC5	99	97.113	Pteropus_vampyrus
ENSCATG00000043083	PABPC5	99	95.801	ENSRNOG00000003354	Pabpc5	99	95.801	Rattus_norvegicus
ENSCATG00000043083	PABPC5	100	100.000	ENSRBIG00000011760	PABPC5	100	100.000	Rhinopithecus_bieti
ENSCATG00000043083	PABPC5	100	100.000	ENSRROG00000036708	PABPC5	100	100.000	Rhinopithecus_roxellana
ENSCATG00000043083	PABPC5	100	99.476	ENSSBOG00000008658	PABPC5	100	99.476	Saimiri_boliviensis_boliviensis
ENSCATG00000043083	PABPC5	99	94.488	ENSSARG00000014012	PABPC5	99	94.488	Sorex_araneus
ENSCATG00000043083	PABPC5	99	97.113	ENSSSCG00000040194	PABPC5	99	97.113	Sus_scrofa
ENSCATG00000043083	PABPC5	99	98.425	ENSTBEG00000016482	PABPC5	99	98.425	Tupaia_belangeri
ENSCATG00000043083	PABPC5	99	96.850	ENSUAMG00000013627	PABPC5	99	96.850	Ursus_americanus
ENSCATG00000043083	PABPC5	99	96.588	ENSUMAG00000023934	PABPC5	99	96.588	Ursus_maritimus
ENSCATG00000043083	PABPC5	99	97.113	ENSVPAG00000001063	PABPC5	99	97.113	Vicugna_pacos
ENSCATG00000043083	PABPC5	99	97.113	ENSVVUG00000013172	PABPC5	99	97.113	Vulpes_vulpes