EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000043226 (Gene tree)
Gene ID: 105573020
Gene Symbol: APOBEC3C
Alias: APOBEC1L|ARDC2|ARDC4|ARP5|PBI|bK150C2.3
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3C
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 6085 bases
Position: chrKQ009547.1:3638232-3644316
Accession: 105573020
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000041220	APOBEC_N	PF08210.11	7.2e-55	1	1
ENSCATP00000041220	APOBEC_C	PF05240.14	2.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000065602	APOBEC3C-201	2807	XM_012032015	ENSCATP00000041220	190 (aa)	XP_011887405	A0A2K5NUY0

Gene Model

Click here to download ENSCATG00000043226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000043226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000043226	APOBEC3C	95	35.294	ENSCATG00000030302	APOBEC3H	99	35.294
ENSCATG00000043226	APOBEC3C	94	40.223	ENSCATG00000039986	AICDA	94	39.716
ENSCATG00000043226	APOBEC3C	99	75.269	ENSCATG00000033502	-	100	75.269
ENSCATG00000043226	APOBEC3C	100	49.735	ENSCATG00000013527	-	98	40.323
ENSCATG00000043226	APOBEC3C	93	34.254	ENSCATG00000010691	APOBEC2	79	34.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000043226	APOBEC3C	100	72.632	ENSG00000243811	APOBEC3D	100	72.632	Homo_sapiens
ENSCATG00000043226	APOBEC3C	100	82.632	ENSG00000244509	APOBEC3C	100	82.632	Homo_sapiens
ENSCATG00000043226	APOBEC3C	100	75.269	ENSG00000128394	APOBEC3F	100	75.269	Homo_sapiens
ENSCATG00000043226	APOBEC3C	100	67.368	ENSANAG00000030088	-	97	67.027	Aotus_nancymaae
ENSCATG00000043226	APOBEC3C	69	68.182	ENSCJAG00000015317	-	100	68.182	Callithrix_jacchus
ENSCATG00000043226	APOBEC3C	98	46.842	ENSCAFG00020002615	-	99	46.842	Canis_lupus_dingo
ENSCATG00000043226	APOBEC3C	96	56.284	ENSTSYG00000028254	-	99	56.284	Carlito_syrichta
ENSCATG00000043226	APOBEC3C	96	50.000	ENSTSYG00000030036	-	99	50.000	Carlito_syrichta
ENSCATG00000043226	APOBEC3C	99	52.198	ENSTSYG00000034260	-	98	52.198	Carlito_syrichta
ENSCATG00000043226	APOBEC3C	98	64.516	ENSCCAG00000030932	-	84	64.516	Cebus_capucinus
ENSCATG00000043226	APOBEC3C	100	75.269	ENSCSAG00000006382	APOBEC3F	100	75.269	Chlorocebus_sabaeus
ENSCATG00000043226	APOBEC3C	100	88.421	ENSCSAG00000006402	APOBEC3C	100	88.421	Chlorocebus_sabaeus
ENSCATG00000043226	APOBEC3C	100	74.731	ENSCANG00000031957	-	100	74.731	Colobus_angolensis_palliatus
ENSCATG00000043226	APOBEC3C	100	88.421	ENSCANG00000039177	APOBEC3C	100	88.421	Colobus_angolensis_palliatus
ENSCATG00000043226	APOBEC3C	100	76.344	ENSCANG00000032904	-	100	76.344	Colobus_angolensis_palliatus
ENSCATG00000043226	APOBEC3C	100	69.355	ENSCANG00000033269	-	100	69.355	Colobus_angolensis_palliatus
ENSCATG00000043226	APOBEC3C	97	42.473	ENSDNOG00000044642	-	99	42.473	Dasypus_novemcinctus
ENSCATG00000043226	APOBEC3C	100	42.157	ENSEASG00005018641	-	100	42.157	Equus_asinus_asinus
ENSCATG00000043226	APOBEC3C	98	46.622	ENSECAG00000006071	-	100	45.699	Equus_caballus
ENSCATG00000043226	APOBEC3C	100	75.269	ENSGGOG00000038678	APOBEC3F	100	75.269	Gorilla_gorilla
ENSCATG00000043226	APOBEC3C	100	76.316	ENSGGOG00000036587	-	100	76.316	Gorilla_gorilla
ENSCATG00000043226	APOBEC3C	98	46.032	ENSHGLG00000017315	-	83	46.032	Heterocephalus_glaber_female
ENSCATG00000043226	APOBEC3C	98	46.032	ENSHGLG00100003105	-	93	46.032	Heterocephalus_glaber_male
ENSCATG00000043226	APOBEC3C	100	73.656	ENSMFAG00000004037	APOBEC3F	100	73.656	Macaca_fascicularis
ENSCATG00000043226	APOBEC3C	100	73.656	ENSMFAG00000002331	-	100	73.656	Macaca_fascicularis
ENSCATG00000043226	APOBEC3C	100	90.000	ENSMFAG00000016792	APOBEC3C	100	90.000	Macaca_fascicularis
ENSCATG00000043226	APOBEC3C	100	73.656	ENSMMUG00000004017	APOBEC3F	100	73.656	Macaca_mulatta
ENSCATG00000043226	APOBEC3C	97	91.304	ENSMMUG00000004018	APOBEC3C	95	91.304	Macaca_mulatta
ENSCATG00000043226	APOBEC3C	100	91.579	ENSMNEG00000045196	APOBEC3C	100	91.579	Macaca_nemestrina
ENSCATG00000043226	APOBEC3C	100	73.656	ENSMNEG00000043316	APOBEC3D	100	73.656	Macaca_nemestrina
ENSCATG00000043226	APOBEC3C	100	98.947	ENSMLEG00000036992	APOBEC3C	100	98.947	Mandrillus_leucophaeus
ENSCATG00000043226	APOBEC3C	100	73.656	ENSMLEG00000029642	APOBEC3F	100	73.656	Mandrillus_leucophaeus
ENSCATG00000043226	APOBEC3C	99	53.723	ENSMICG00000042615	-	89	53.723	Microcebus_murinus
ENSCATG00000043226	APOBEC3C	97	46.073	ENSMLUG00000023676	-	99	46.073	Myotis_lucifugus
ENSCATG00000043226	APOBEC3C	100	60.000	ENSNLEG00000035811	-	100	60.000	Nomascus_leucogenys
ENSCATG00000043226	APOBEC3C	100	77.368	ENSNLEG00000028392	APOBEC3C	100	77.368	Nomascus_leucogenys
ENSCATG00000043226	APOBEC3C	98	47.159	ENSOGAG00000033404	-	99	47.159	Otolemur_garnettii
ENSCATG00000043226	APOBEC3C	99	45.745	ENSOGAG00000030300	-	98	45.745	Otolemur_garnettii
ENSCATG00000043226	APOBEC3C	98	49.198	ENSOGAG00000032498	-	99	49.198	Otolemur_garnettii
ENSCATG00000043226	APOBEC3C	100	82.632	ENSPPAG00000014118	APOBEC3C	100	82.632	Pan_paniscus
ENSCATG00000043226	APOBEC3C	100	73.158	ENSPPAG00000028218	-	100	73.158	Pan_paniscus
ENSCATG00000043226	APOBEC3C	97	48.370	ENSPPRG00000003726	-	97	48.370	Panthera_pardus
ENSCATG00000043226	APOBEC3C	100	73.158	ENSPTRG00000041588	APOBEC3D	100	73.158	Pan_troglodytes
ENSCATG00000043226	APOBEC3C	100	74.731	ENSPTRG00000014385	APOBEC3C	100	74.731	Pan_troglodytes
ENSCATG00000043226	APOBEC3C	100	88.947	ENSPANG00000010775	APOBEC3F	100	88.947	Papio_anubis
ENSCATG00000043226	APOBEC3C	100	80.526	ENSPPYG00000011832	APOBEC3C	100	80.526	Pongo_abelii
ENSCATG00000043226	APOBEC3C	69	56.061	ENSPCOG00000018072	-	99	56.061	Propithecus_coquereli
ENSCATG00000043226	APOBEC3C	67	57.031	ENSPCOG00000022067	-	97	57.031	Propithecus_coquereli
ENSCATG00000043226	APOBEC3C	94	47.967	ENSPVAG00000009461	-	50	47.967	Pteropus_vampyrus
ENSCATG00000043226	APOBEC3C	100	73.333	ENSRBIG00000042297	-	99	75.796	Rhinopithecus_bieti
ENSCATG00000043226	APOBEC3C	100	72.581	ENSRBIG00000030834	-	100	72.581	Rhinopithecus_bieti
ENSCATG00000043226	APOBEC3C	100	84.737	ENSRBIG00000030323	-	100	84.737	Rhinopithecus_bieti
ENSCATG00000043226	APOBEC3C	100	72.778	ENSRROG00000029996	-	100	72.778	Rhinopithecus_roxellana
ENSCATG00000043226	APOBEC3C	100	84.737	ENSRROG00000029045	APOBEC3C	100	84.737	Rhinopithecus_roxellana
ENSCATG00000043226	APOBEC3C	100	72.043	ENSRROG00000028557	-	100	72.043	Rhinopithecus_roxellana
ENSCATG00000043226	APOBEC3C	100	66.316	ENSSBOG00000032780	-	100	66.316	Saimiri_boliviensis_boliviensis
ENSCATG00000043226	APOBEC3C	95	45.304	ENSUAMG00000004433	-	99	45.304	Ursus_americanus
ENSCATG00000043226	APOBEC3C	97	46.196	ENSUMAG00000014441	-	85	46.196	Ursus_maritimus
ENSCATG00000043226	APOBEC3C	77	50.336	ENSVVUG00000014628	-	91	50.000	Vulpes_vulpes