EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000043715 (Gene tree)
Gene ID: 105587185
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 78178 bases
Position: chrKQ009636.1:7995870-8074047
Accession: 105587185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000042203	DND1_DSRM	PF14709.7	1.7e-24	1	1
ENSCATP00000042221	DND1_DSRM	PF14709.7	2.4e-17	1	1
ENSCATP00000042217	DND1_DSRM	PF14709.7	5.4e-17	1	1
ENSCATP00000042221	RRM_1	PF00076.22	3.5e-39	1	3
ENSCATP00000042221	RRM_1	PF00076.22	3.5e-39	2	3
ENSCATP00000042221	RRM_1	PF00076.22	3.5e-39	3	3
ENSCATP00000042203	RRM_1	PF00076.22	4e-39	1	3
ENSCATP00000042203	RRM_1	PF00076.22	4e-39	2	3
ENSCATP00000042203	RRM_1	PF00076.22	4e-39	3	3
ENSCATP00000042217	RRM_1	PF00076.22	4.7e-39	1	3
ENSCATP00000042217	RRM_1	PF00076.22	4.7e-39	2	3
ENSCATP00000042217	RRM_1	PF00076.22	4.7e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000066650	A1CF-202	1788	XM_012063198	ENSCATP00000042217	595 (aa)	XP_011918588	A0A2K5NXQ2
ENSCATT00000066636	A1CF-201	2098	XM_012063196	ENSCATP00000042203	584 (aa)	XP_011918586	A0A2K5NXF7
ENSCATT00000066654	A1CF-203	1689	-	ENSCATP00000042221	562 (aa)	-	A0A2K5NXY4

Gene Model

Click here to download ENSCATG00000043715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000043715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000043715	A1CF	78	58.407	ENSCATG00000042064	RBM47	87	68.300
ENSCATG00000043715	A1CF	51	30.189	ENSCATG00000036313	RBM14	95	30.189
ENSCATG00000043715	A1CF	71	72.333	ENSCATG00000040148	RBM46	85	72.333
ENSCATG00000043715	A1CF	54	52.427	ENSCATG00000034066	SYNCRIP	70	44.764
ENSCATG00000043715	A1CF	56	52.215	ENSCATG00000035305	HNRNPR	53	52.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000043715	A1CF	100	97.785	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSCATG00000043715	A1CF	100	74.536	ENSAPOG00000008259	a1cf	100	74.536	Acanthochromis_polyacanthus
ENSCATG00000043715	A1CF	100	94.595	ENSAMEG00000000523	A1CF	100	94.595	Ailuropoda_melanoleuca
ENSCATG00000043715	A1CF	100	76.364	ENSACIG00000008632	a1cf	100	77.521	Amphilophus_citrinellus
ENSCATG00000043715	A1CF	100	75.208	ENSAOCG00000023744	a1cf	96	84.348	Amphiprion_ocellaris
ENSCATG00000043715	A1CF	100	74.056	ENSAPEG00000009537	a1cf	100	74.877	Amphiprion_percula
ENSCATG00000043715	A1CF	100	76.733	ENSATEG00000013720	a1cf	100	78.053	Anabas_testudineus
ENSCATG00000043715	A1CF	100	88.027	ENSAPLG00000002964	A1CF	100	88.027	Anas_platyrhynchos
ENSCATG00000043715	A1CF	100	84.957	ENSACAG00000015269	A1CF	100	84.957	Anolis_carolinensis
ENSCATG00000043715	A1CF	100	98.294	ENSANAG00000019974	A1CF	100	98.294	Aotus_nancymaae
ENSCATG00000043715	A1CF	100	74.709	ENSACLG00000017428	a1cf	100	76.206	Astatotilapia_calliptera
ENSCATG00000043715	A1CF	100	72.893	ENSAMXG00000018180	a1cf	100	73.058	Astyanax_mexicanus
ENSCATG00000043715	A1CF	100	94.889	ENSBTAG00000021195	A1CF	100	96.097	Bos_taurus
ENSCATG00000043715	A1CF	100	97.306	ENSCJAG00000005045	A1CF	100	97.306	Callithrix_jacchus
ENSCATG00000043715	A1CF	100	93.919	ENSCAFG00000015581	A1CF	100	94.426	Canis_familiaris
ENSCATG00000043715	A1CF	100	93.919	ENSCAFG00020026421	A1CF	100	94.426	Canis_lupus_dingo
ENSCATG00000043715	A1CF	100	93.277	ENSCHIG00000020411	A1CF	100	93.445	Capra_hircus
ENSCATG00000043715	A1CF	100	91.167	ENSTSYG00000001755	A1CF	100	97.096	Carlito_syrichta
ENSCATG00000043715	A1CF	100	83.129	ENSCAPG00000017386	A1CF	90	94.737	Cavia_aperea
ENSCATG00000043715	A1CF	100	95.118	ENSCPOG00000009807	A1CF	100	94.444	Cavia_porcellus
ENSCATG00000043715	A1CF	100	97.302	ENSCCAG00000018168	A1CF	100	97.302	Cebus_capucinus
ENSCATG00000043715	A1CF	100	94.631	ENSCLAG00000010424	A1CF	100	94.295	Chinchilla_lanigera
ENSCATG00000043715	A1CF	100	97.973	ENSCSAG00000007032	A1CF	100	97.973	Chlorocebus_sabaeus
ENSCATG00000043715	A1CF	98	90.550	ENSCHOG00000009089	A1CF	98	90.550	Choloepus_hoffmanni
ENSCATG00000043715	A1CF	100	87.858	ENSCPBG00000026464	A1CF	100	87.352	Chrysemys_picta_bellii
ENSCATG00000043715	A1CF	100	97.973	ENSCANG00000038032	A1CF	100	97.973	Colobus_angolensis_palliatus
ENSCATG00000043715	A1CF	100	92.941	ENSCGRG00001017413	A1cf	100	92.941	Cricetulus_griseus_chok1gshd
ENSCATG00000043715	A1CF	100	92.101	ENSCGRG00000017332	A1cf	100	92.773	Cricetulus_griseus_crigri
ENSCATG00000043715	A1CF	100	73.632	ENSCSEG00000002361	a1cf	100	74.959	Cynoglossus_semilaevis
ENSCATG00000043715	A1CF	100	75.578	ENSCVAG00000010520	a1cf	100	77.063	Cyprinodon_variegatus
ENSCATG00000043715	A1CF	100	78.983	ENSDARG00000002968	a1cf	100	80.339	Danio_rerio
ENSCATG00000043715	A1CF	100	93.445	ENSDNOG00000002829	A1CF	100	93.445	Dasypus_novemcinctus
ENSCATG00000043715	A1CF	82	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSCATG00000043715	A1CF	100	95.142	ENSEASG00005012924	A1CF	100	95.142	Equus_asinus_asinus
ENSCATG00000043715	A1CF	100	94.137	ENSECAG00000010424	A1CF	100	94.305	Equus_caballus
ENSCATG00000043715	A1CF	82	80.043	ENSEEUG00000000013	A1CF	99	79.574	Erinaceus_europaeus
ENSCATG00000043715	A1CF	100	77.759	ENSELUG00000003159	a1cf	100	78.595	Esox_lucius
ENSCATG00000043715	A1CF	100	94.692	ENSFCAG00000011179	A1CF	100	94.692	Felis_catus
ENSCATG00000043715	A1CF	100	87.350	ENSFALG00000013183	A1CF	100	87.350	Ficedula_albicollis
ENSCATG00000043715	A1CF	100	95.400	ENSFDAG00000019371	A1CF	100	95.060	Fukomys_damarensis
ENSCATG00000043715	A1CF	100	70.792	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSCATG00000043715	A1CF	100	70.083	ENSGMOG00000018943	a1cf	100	70.413	Gadus_morhua
ENSCATG00000043715	A1CF	99	83.529	ENSGALG00000003765	A1CF	97	87.189	Gallus_gallus
ENSCATG00000043715	A1CF	100	70.833	ENSGAFG00000014868	a1cf	100	71.833	Gambusia_affinis
ENSCATG00000043715	A1CF	100	72.533	ENSGACG00000010241	a1cf	100	73.191	Gasterosteus_aculeatus
ENSCATG00000043715	A1CF	94	87.925	ENSGAGG00000016508	A1CF	98	86.140	Gopherus_agassizii
ENSCATG00000043715	A1CF	100	96.639	ENSGGOG00000009670	A1CF	100	96.639	Gorilla_gorilla
ENSCATG00000043715	A1CF	100	75.702	ENSHBUG00000021959	a1cf	100	77.025	Haplochromis_burtoni
ENSCATG00000043715	A1CF	100	94.790	ENSHGLG00000008955	A1CF	100	94.454	Heterocephalus_glaber_female
ENSCATG00000043715	A1CF	100	94.118	ENSHGLG00100000518	A1CF	100	93.782	Heterocephalus_glaber_male
ENSCATG00000043715	A1CF	99	71.012	ENSHCOG00000017669	a1cf	100	71.941	Hippocampus_comes
ENSCATG00000043715	A1CF	94	81.970	ENSIPUG00000010367	a1cf	96	81.970	Ictalurus_punctatus
ENSCATG00000043715	A1CF	100	75.447	ENSKMAG00000006568	a1cf	100	76.260	Kryptolebias_marmoratus
ENSCATG00000043715	A1CF	99	74.141	ENSLBEG00000020994	a1cf	98	75.947	Labrus_bergylta
ENSCATG00000043715	A1CF	100	82.483	ENSLACG00000008061	A1CF	100	82.483	Latimeria_chalumnae
ENSCATG00000043715	A1CF	100	81.240	ENSLOCG00000006302	a1cf	100	81.240	Lepisosteus_oculatus
ENSCATG00000043715	A1CF	100	93.277	ENSLAFG00000015462	A1CF	100	93.277	Loxodonta_africana
ENSCATG00000043715	A1CF	100	99.658	ENSMFAG00000035948	A1CF	100	99.658	Macaca_fascicularis
ENSCATG00000043715	A1CF	100	99.658	ENSMMUG00000007077	A1CF	100	99.658	Macaca_mulatta
ENSCATG00000043715	A1CF	100	99.486	ENSMNEG00000031454	A1CF	100	99.486	Macaca_nemestrina
ENSCATG00000043715	A1CF	100	100.000	ENSMLEG00000037223	A1CF	100	100.000	Mandrillus_leucophaeus
ENSCATG00000043715	A1CF	100	74.461	ENSMAMG00000010402	a1cf	100	76.490	Mastacembelus_armatus
ENSCATG00000043715	A1CF	100	74.707	ENSMZEG00005013245	a1cf	100	75.712	Maylandia_zebra
ENSCATG00000043715	A1CF	100	87.374	ENSMGAG00000001507	A1CF	100	87.374	Meleagris_gallopavo
ENSCATG00000043715	A1CF	100	92.101	ENSMAUG00000007422	A1cf	100	92.605	Mesocricetus_auratus
ENSCATG00000043715	A1CF	100	95.932	ENSMICG00000003377	A1CF	100	95.932	Microcebus_murinus
ENSCATG00000043715	A1CF	100	92.269	ENSMOCG00000021536	A1cf	100	92.437	Microtus_ochrogaster
ENSCATG00000043715	A1CF	100	68.053	ENSMMOG00000009422	a1cf	100	70.000	Mola_mola
ENSCATG00000043715	A1CF	97	88.869	ENSMODG00000016478	A1CF	99	91.248	Monodelphis_domestica
ENSCATG00000043715	A1CF	100	73.175	ENSMALG00000012992	a1cf	100	73.175	Monopterus_albus
ENSCATG00000043715	A1CF	100	93.186	MGP_CAROLIEiJ_G0022873	A1cf	100	93.697	Mus_caroli
ENSCATG00000043715	A1CF	100	93.186	ENSMUSG00000052595	A1cf	99	95.801	Mus_musculus
ENSCATG00000043715	A1CF	100	93.015	MGP_PahariEiJ_G0014366	A1cf	100	93.015	Mus_pahari
ENSCATG00000043715	A1CF	100	92.675	MGP_SPRETEiJ_G0023792	A1cf	100	93.186	Mus_spretus
ENSCATG00000043715	A1CF	100	88.851	ENSMPUG00000016971	A1CF	100	88.851	Mustela_putorius_furo
ENSCATG00000043715	A1CF	100	92.605	ENSMLUG00000016071	A1CF	100	92.605	Myotis_lucifugus
ENSCATG00000043715	A1CF	100	93.277	ENSNGAG00000015136	A1cf	100	93.445	Nannospalax_galili
ENSCATG00000043715	A1CF	100	76.033	ENSNBRG00000001712	a1cf	100	77.355	Neolamprologus_brichardi
ENSCATG00000043715	A1CF	100	97.479	ENSNLEG00000012028	A1CF	100	97.479	Nomascus_leucogenys
ENSCATG00000043715	A1CF	94	91.486	ENSMEUG00000015909	A1CF	100	91.304	Notamacropus_eugenii
ENSCATG00000043715	A1CF	93	83.871	ENSOPRG00000010667	A1CF	97	84.023	Ochotona_princeps
ENSCATG00000043715	A1CF	100	75.372	ENSONIG00000019105	a1cf	100	77.025	Oreochromis_niloticus
ENSCATG00000043715	A1CF	81	89.588	ENSOANG00000007360	A1CF	99	90.196	Ornithorhynchus_anatinus
ENSCATG00000043715	A1CF	100	94.048	ENSOCUG00000011587	A1CF	100	94.728	Oryctolagus_cuniculus
ENSCATG00000043715	A1CF	100	72.520	ENSORLG00000013342	a1cf	100	72.520	Oryzias_latipes
ENSCATG00000043715	A1CF	100	73.977	ENSORLG00020000586	a1cf	100	74.346	Oryzias_latipes_hni
ENSCATG00000043715	A1CF	100	74.141	ENSORLG00015018569	a1cf	100	74.510	Oryzias_latipes_hsok
ENSCATG00000043715	A1CF	100	75.622	ENSOMEG00000013531	a1cf	100	75.622	Oryzias_melastigma
ENSCATG00000043715	A1CF	100	94.764	ENSOGAG00000012884	A1CF	100	94.764	Otolemur_garnettii
ENSCATG00000043715	A1CF	100	93.109	ENSOARG00000013695	A1CF	100	93.277	Ovis_aries
ENSCATG00000043715	A1CF	100	94.050	ENSPPAG00000028115	A1CF	100	97.379	Pan_paniscus
ENSCATG00000043715	A1CF	100	93.750	ENSPPRG00000012180	A1CF	100	93.750	Panthera_pardus
ENSCATG00000043715	A1CF	100	93.750	ENSPTIG00000021223	A1CF	100	93.750	Panthera_tigris_altaica
ENSCATG00000043715	A1CF	100	97.785	ENSPTRG00000002508	A1CF	100	97.785	Pan_troglodytes
ENSCATG00000043715	A1CF	100	99.664	ENSPANG00000021988	A1CF	100	99.664	Papio_anubis
ENSCATG00000043715	A1CF	100	79.264	ENSPKIG00000025176	a1cf	100	79.097	Paramormyrops_kingsleyae
ENSCATG00000043715	A1CF	100	88.718	ENSPSIG00000010318	A1CF	100	88.547	Pelodiscus_sinensis
ENSCATG00000043715	A1CF	93	70.420	ENSPMGG00000013359	a1cf	99	68.348	Periophthalmus_magnuspinnatus
ENSCATG00000043715	A1CF	100	93.950	ENSPEMG00000015021	A1cf	100	93.782	Peromyscus_maniculatus_bairdii
ENSCATG00000043715	A1CF	100	90.940	ENSPCIG00000002175	A1CF	100	90.769	Phascolarctos_cinereus
ENSCATG00000043715	A1CF	100	74.756	ENSPFOG00000007437	-	100	76.221	Poecilia_formosa
ENSCATG00000043715	A1CF	100	74.919	ENSPFOG00000006683	a1cf	100	76.384	Poecilia_formosa
ENSCATG00000043715	A1CF	100	75.743	ENSPLAG00000000026	a1cf	100	77.228	Poecilia_latipinna
ENSCATG00000043715	A1CF	100	75.743	ENSPLAG00000001210	-	100	77.228	Poecilia_latipinna
ENSCATG00000043715	A1CF	100	67.157	ENSPMEG00000015529	-	100	68.627	Poecilia_mexicana
ENSCATG00000043715	A1CF	100	68.046	ENSPMEG00000000921	a1cf	100	69.536	Poecilia_mexicana
ENSCATG00000043715	A1CF	100	74.593	ENSPREG00000016298	a1cf	100	76.059	Poecilia_reticulata
ENSCATG00000043715	A1CF	100	98.637	ENSPPYG00000002819	A1CF	100	98.637	Pongo_abelii
ENSCATG00000043715	A1CF	79	75.000	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSCATG00000043715	A1CF	100	94.966	ENSPCOG00000024172	A1CF	100	94.966	Propithecus_coquereli
ENSCATG00000043715	A1CF	100	74.878	ENSPNYG00000017944	a1cf	100	76.183	Pundamilia_nyererei
ENSCATG00000043715	A1CF	100	80.369	ENSPNAG00000007704	a1cf	100	80.369	Pygocentrus_nattereri
ENSCATG00000043715	A1CF	100	93.526	ENSRNOG00000033195	A1cf	100	94.037	Rattus_norvegicus
ENSCATG00000043715	A1CF	100	91.582	ENSRBIG00000042892	A1CF	100	98.400	Rhinopithecus_bieti
ENSCATG00000043715	A1CF	100	98.311	ENSRROG00000041398	A1CF	100	98.311	Rhinopithecus_roxellana
ENSCATG00000043715	A1CF	100	96.807	ENSSBOG00000021930	A1CF	100	97.813	Saimiri_boliviensis_boliviensis
ENSCATG00000043715	A1CF	100	89.744	ENSSHAG00000005096	A1CF	100	89.744	Sarcophilus_harrisii
ENSCATG00000043715	A1CF	100	79.496	ENSSFOG00015011774	a1cf	100	79.496	Scleropages_formosus
ENSCATG00000043715	A1CF	100	74.104	ENSSMAG00000013271	a1cf	100	74.430	Scophthalmus_maximus
ENSCATG00000043715	A1CF	100	75.290	ENSSDUG00000013930	a1cf	100	76.119	Seriola_dumerili
ENSCATG00000043715	A1CF	100	70.234	ENSSLDG00000004290	a1cf	100	71.237	Seriola_lalandi_dorsalis
ENSCATG00000043715	A1CF	95	84.588	ENSSARG00000005940	A1CF	96	84.946	Sorex_araneus
ENSCATG00000043715	A1CF	99	84.459	ENSSPUG00000006797	A1CF	99	82.943	Sphenodon_punctatus
ENSCATG00000043715	A1CF	100	93.782	ENSSSCG00000010431	A1CF	100	93.950	Sus_scrofa
ENSCATG00000043715	A1CF	100	85.953	ENSTGUG00000005090	A1CF	100	85.953	Taeniopygia_guttata
ENSCATG00000043715	A1CF	100	73.083	ENSTRUG00000001982	a1cf	100	73.083	Takifugu_rubripes
ENSCATG00000043715	A1CF	100	73.821	ENSTNIG00000003580	a1cf	100	73.496	Tetraodon_nigroviridis
ENSCATG00000043715	A1CF	97	87.873	ENSTTRG00000013190	A1CF	100	84.411	Tursiops_truncatus
ENSCATG00000043715	A1CF	100	95.890	ENSUAMG00000020065	A1CF	100	95.890	Ursus_americanus
ENSCATG00000043715	A1CF	100	94.088	ENSUMAG00000011162	A1CF	100	94.088	Ursus_maritimus
ENSCATG00000043715	A1CF	87	91.033	ENSVPAG00000006130	A1CF	86	91.033	Vicugna_pacos
ENSCATG00000043715	A1CF	100	95.377	ENSVVUG00000002504	A1CF	100	95.548	Vulpes_vulpes
ENSCATG00000043715	A1CF	100	77.722	ENSXETG00000006611	a1cf	100	77.554	Xenopus_tropicalis
ENSCATG00000043715	A1CF	100	77.076	ENSXCOG00000003302	a1cf	100	78.073	Xiphophorus_couchianus
ENSCATG00000043715	A1CF	100	76.066	ENSXMAG00000016703	a1cf	100	77.049	Xiphophorus_maculatus