EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCATG00000043792 (Gene tree)
Gene ID: 105599230
Gene Symbol: TNPO1
Alias: -
Full Name: transportin 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Minus strand
Length: 98893 bases
Position: chrKQ011124.1:23910351-24009243
Accession: 105599230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000042388	IBN_N	PF03810.19	8.1e-16	1	1
ENSCATP00000042387	IBN_N	PF03810.19	9.4e-16	1	1
ENSCATP00000042361	IBN_N	PF03810.19	9.4e-16	1	1
ENSCATP00000042346	IBN_N	PF03810.19	9.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000066780	TNPO1-201	8560	XM_012089342	ENSCATP00000042346	898 (aa)	XP_011944732	A0A2K5NYA3
ENSCATT00000066822	TNPO1-205	2574	XM_012089347	ENSCATP00000042388	781 (aa)	XP_011944737	A0A2K5NY05
ENSCATT00000066805	TNPO1-203	2547	-	ENSCATP00000042371	848 (aa)	-	A0A2K5NYC6
ENSCATT00000066821	TNPO1-204	2682	-	ENSCATP00000042387	893 (aa)	-	A0A2K5NY70
ENSCATT00000066795	TNPO1-202	9358	XM_012089343	ENSCATP00000042361	890 (aa)	XP_011944733	A0A2K5NYB8

Gene Model

Click here to download ENSCATG00000043792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000043792's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCATG00000043792	TNPO1	99	84.392	ENSCATG00000042599	TNPO2	99	84.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000043792	TNPO1	100	100.000	ENSG00000083312	TNPO1	100	100.000	Homo_sapiens
ENSCATG00000043792	TNPO1	100	93.820	ENSAPOG00000003453	tnpo1	100	93.820	Acanthochromis_polyacanthus
ENSCATG00000043792	TNPO1	100	99.109	ENSAMEG00000007147	TNPO1	99	99.109	Ailuropoda_melanoleuca
ENSCATG00000043792	TNPO1	95	92.973	ENSACIG00000003711	tnpo1	99	92.894	Amphilophus_citrinellus
ENSCATG00000043792	TNPO1	100	93.933	ENSAOCG00000008154	tnpo1	100	93.933	Amphiprion_ocellaris
ENSCATG00000043792	TNPO1	100	93.933	ENSAPEG00000001112	tnpo1	100	93.933	Amphiprion_percula
ENSCATG00000043792	TNPO1	100	93.483	ENSATEG00000010408	tnpo1	100	93.483	Anabas_testudineus
ENSCATG00000043792	TNPO1	99	92.672	ENSAPLG00000009619	-	97	93.678	Anas_platyrhynchos
ENSCATG00000043792	TNPO1	100	96.742	ENSACAG00000009599	TNPO1	100	96.742	Anolis_carolinensis
ENSCATG00000043792	TNPO1	100	88.652	ENSANAG00000025351	-	100	88.419	Aotus_nancymaae
ENSCATG00000043792	TNPO1	100	99.555	ENSANAG00000022453	-	100	99.555	Aotus_nancymaae
ENSCATG00000043792	TNPO1	100	64.302	ENSANAG00000027118	-	99	64.199	Aotus_nancymaae
ENSCATG00000043792	TNPO1	100	91.573	ENSACLG00000027223	tnpo1	100	91.573	Astatotilapia_calliptera
ENSCATG00000043792	TNPO1	100	92.713	ENSAMXG00000009842	tnpo1	100	92.377	Astyanax_mexicanus
ENSCATG00000043792	TNPO1	100	99.777	ENSBTAG00000007979	TNPO1	100	99.777	Bos_taurus
ENSCATG00000043792	TNPO1	100	99.666	ENSCJAG00000016409	TNPO1	100	99.666	Callithrix_jacchus
ENSCATG00000043792	TNPO1	96	99.767	ENSCAFG00000008081	TNPO1	100	99.767	Canis_familiaris
ENSCATG00000043792	TNPO1	100	96.854	ENSCAFG00020017397	TNPO1	100	98.400	Canis_lupus_dingo
ENSCATG00000043792	TNPO1	100	99.666	ENSCHIG00000023462	TNPO1	100	99.666	Capra_hircus
ENSCATG00000043792	TNPO1	99	95.706	ENSTSYG00000001871	TNPO1	97	98.246	Carlito_syrichta
ENSCATG00000043792	TNPO1	100	99.555	ENSCCAG00000026472	TNPO1	100	99.555	Cebus_capucinus
ENSCATG00000043792	TNPO1	100	99.555	ENSCLAG00000016191	TNPO1	100	99.555	Chinchilla_lanigera
ENSCATG00000043792	TNPO1	100	99.889	ENSCSAG00000015616	TNPO1	100	99.889	Chlorocebus_sabaeus
ENSCATG00000043792	TNPO1	99	86.504	ENSCHOG00000001746	TNPO1	100	87.131	Choloepus_hoffmanni
ENSCATG00000043792	TNPO1	100	97.753	ENSCPBG00000000260	TNPO1	99	93.326	Chrysemys_picta_bellii
ENSCATG00000043792	TNPO1	99	75.421	ENSCSAVG00000010981	-	99	75.421	Ciona_savignyi
ENSCATG00000043792	TNPO1	100	100.000	ENSCANG00000004353	TNPO1	100	100.000	Colobus_angolensis_palliatus
ENSCATG00000043792	TNPO1	100	99.666	ENSCGRG00001016580	Tnpo1	100	99.666	Cricetulus_griseus_chok1gshd
ENSCATG00000043792	TNPO1	96	99.649	ENSCGRG00000010366	Tnpo1	100	99.649	Cricetulus_griseus_crigri
ENSCATG00000043792	TNPO1	100	92.247	ENSCSEG00000012674	tnpo1	100	92.247	Cynoglossus_semilaevis
ENSCATG00000043792	TNPO1	100	93.258	ENSCVAG00000001010	tnpo1	100	93.258	Cyprinodon_variegatus
ENSCATG00000043792	TNPO1	100	92.593	ENSDARG00000035390	tnpo1	100	92.256	Danio_rerio
ENSCATG00000043792	TNPO1	100	93.617	ENSDNOG00000006647	TNPO1	100	93.638	Dasypus_novemcinctus
ENSCATG00000043792	TNPO1	93	99.759	ENSDORG00000006476	Tnpo1	100	99.759	Dipodomys_ordii
ENSCATG00000043792	TNPO1	99	57.788	FBgn0035693	CG8219	99	57.336	Drosophila_melanogaster
ENSCATG00000043792	TNPO1	86	99.625	ENSETEG00000017805	TNPO1	90	99.625	Echinops_telfairi
ENSCATG00000043792	TNPO1	94	85.119	ENSEBUG00000001895	tnpo1	100	85.238	Eptatretus_burgeri
ENSCATG00000043792	TNPO1	100	100.000	ENSEASG00005018055	TNPO1	100	100.000	Equus_asinus_asinus
ENSCATG00000043792	TNPO1	100	99.777	ENSECAG00000024424	TNPO1	100	99.777	Equus_caballus
ENSCATG00000043792	TNPO1	100	86.601	ENSELUG00000002821	tnpo1	100	86.166	Esox_lucius
ENSCATG00000043792	TNPO1	100	100.000	ENSFCAG00000013181	TNPO1	100	100.000	Felis_catus
ENSCATG00000043792	TNPO1	100	97.416	ENSFALG00000010292	TNPO1	100	97.416	Ficedula_albicollis
ENSCATG00000043792	TNPO1	100	99.666	ENSFDAG00000013345	TNPO1	100	99.666	Fukomys_damarensis
ENSCATG00000043792	TNPO1	100	93.603	ENSFHEG00000019234	tnpo1	100	93.603	Fundulus_heteroclitus
ENSCATG00000043792	TNPO1	100	90.034	ENSGMOG00000000347	tnpo1	99	90.034	Gadus_morhua
ENSCATG00000043792	TNPO1	100	96.742	ENSGALG00000015014	TNPO1	100	96.742	Gallus_gallus
ENSCATG00000043792	TNPO1	100	92.377	ENSGAFG00000000943	tnpo1	100	92.377	Gambusia_affinis
ENSCATG00000043792	TNPO1	100	93.146	ENSGACG00000015841	tnpo1	99	93.146	Gasterosteus_aculeatus
ENSCATG00000043792	TNPO1	100	97.528	ENSGAGG00000013419	TNPO1	100	97.528	Gopherus_agassizii
ENSCATG00000043792	TNPO1	100	83.184	ENSGGOG00000022535	-	99	83.240	Gorilla_gorilla
ENSCATG00000043792	TNPO1	100	100.000	ENSGGOG00000026800	TNPO1	100	100.000	Gorilla_gorilla
ENSCATG00000043792	TNPO1	100	93.146	ENSHBUG00000008068	tnpo1	100	93.146	Haplochromis_burtoni
ENSCATG00000043792	TNPO1	100	99.332	ENSHGLG00000000970	-	100	99.332	Heterocephalus_glaber_female
ENSCATG00000043792	TNPO1	100	75.501	ENSHGLG00100000963	-	99	77.209	Heterocephalus_glaber_male
ENSCATG00000043792	TNPO1	96	99.182	ENSHGLG00100017090	-	99	99.182	Heterocephalus_glaber_male
ENSCATG00000043792	TNPO1	100	99.775	ENSJJAG00000010244	Tnpo1	97	99.775	Jaculus_jaculus
ENSCATG00000043792	TNPO1	100	93.596	ENSKMAG00000018195	tnpo1	100	93.596	Kryptolebias_marmoratus
ENSCATG00000043792	TNPO1	95	93.117	ENSLBEG00000009521	tnpo1	96	90.136	Labrus_bergylta
ENSCATG00000043792	TNPO1	96	89.186	ENSLACG00000012199	TNPO1	100	89.186	Latimeria_chalumnae
ENSCATG00000043792	TNPO1	100	95.393	ENSLOCG00000011092	tnpo1	98	95.302	Lepisosteus_oculatus
ENSCATG00000043792	TNPO1	97	99.192	ENSLAFG00000011796	TNPO1	100	99.192	Loxodonta_africana
ENSCATG00000043792	TNPO1	100	100.000	ENSMFAG00000003636	TNPO1	100	100.000	Macaca_fascicularis
ENSCATG00000043792	TNPO1	100	99.889	ENSMMUG00000020923	TNPO1	100	99.889	Macaca_mulatta
ENSCATG00000043792	TNPO1	100	100.000	ENSMNEG00000044581	TNPO1	100	100.000	Macaca_nemestrina
ENSCATG00000043792	TNPO1	100	100.000	ENSMLEG00000030740	TNPO1	100	100.000	Mandrillus_leucophaeus
ENSCATG00000043792	TNPO1	100	93.483	ENSMAMG00000001357	tnpo1	100	93.483	Mastacembelus_armatus
ENSCATG00000043792	TNPO1	100	92.921	ENSMZEG00005004913	tnpo1	100	92.921	Maylandia_zebra
ENSCATG00000043792	TNPO1	100	99.663	ENSMAUG00000020550	Tnpo1	100	100.000	Mesocricetus_auratus
ENSCATG00000043792	TNPO1	100	95.843	ENSMICG00000008468	TNPO1	99	95.857	Microcebus_murinus
ENSCATG00000043792	TNPO1	100	99.663	ENSMOCG00000009301	Tnpo1	99	99.663	Microtus_ochrogaster
ENSCATG00000043792	TNPO1	95	92.588	ENSMMOG00000005551	tnpo1	99	92.526	Mola_mola
ENSCATG00000043792	TNPO1	99	97.872	ENSMODG00000001721	TNPO1	80	97.872	Monodelphis_domestica
ENSCATG00000043792	TNPO1	100	92.360	ENSMALG00000009782	tnpo1	100	92.360	Monopterus_albus
ENSCATG00000043792	TNPO1	100	99.443	MGP_CAROLIEiJ_G0018826	Tnpo1	100	100.000	Mus_caroli
ENSCATG00000043792	TNPO1	100	99.666	ENSMUSG00000009470	Tnpo1	100	100.000	Mus_musculus
ENSCATG00000043792	TNPO1	100	99.555	MGP_PahariEiJ_G0015901	Tnpo1	100	100.000	Mus_pahari
ENSCATG00000043792	TNPO1	100	99.443	MGP_SPRETEiJ_G0019708	Tnpo1	100	100.000	Mus_spretus
ENSCATG00000043792	TNPO1	100	99.889	ENSMPUG00000014387	TNPO1	100	99.889	Mustela_putorius_furo
ENSCATG00000043792	TNPO1	96	99.302	ENSMLUG00000016317	TNPO1	100	99.302	Myotis_lucifugus
ENSCATG00000043792	TNPO1	100	99.666	ENSNGAG00000021263	Tnpo1	100	99.666	Nannospalax_galili
ENSCATG00000043792	TNPO1	95	92.838	ENSNBRG00000009998	tnpo1	99	92.765	Neolamprologus_brichardi
ENSCATG00000043792	TNPO1	100	100.000	ENSNLEG00000004572	TNPO1	100	100.000	Nomascus_leucogenys
ENSCATG00000043792	TNPO1	91	93.272	ENSOPRG00000012390	TNPO1	91	93.272	Ochotona_princeps
ENSCATG00000043792	TNPO1	100	99.332	ENSODEG00000001771	TNPO1	100	99.332	Octodon_degus
ENSCATG00000043792	TNPO1	100	92.411	ENSONIG00000011151	tnpo1	99	92.411	Oreochromis_niloticus
ENSCATG00000043792	TNPO1	92	97.927	ENSOANG00000015785	TNPO1	100	97.927	Ornithorhynchus_anatinus
ENSCATG00000043792	TNPO1	96	93.224	ENSOCUG00000013318	TNPO1	100	93.224	Oryctolagus_cuniculus
ENSCATG00000043792	TNPO1	94	92.944	ENSORLG00000003182	tnpo1	99	92.737	Oryzias_latipes
ENSCATG00000043792	TNPO1	99	93.010	ENSORLG00020011559	tnpo1	99	93.010	Oryzias_latipes_hni
ENSCATG00000043792	TNPO1	99	93.123	ENSORLG00015019113	tnpo1	99	93.123	Oryzias_latipes_hsok
ENSCATG00000043792	TNPO1	99	93.010	ENSOMEG00000014567	tnpo1	99	93.010	Oryzias_melastigma
ENSCATG00000043792	TNPO1	100	99.889	ENSOGAG00000000808	TNPO1	100	99.889	Otolemur_garnettii
ENSCATG00000043792	TNPO1	100	99.777	ENSOARG00000005038	TNPO1	84	99.777	Ovis_aries
ENSCATG00000043792	TNPO1	100	100.000	ENSPPAG00000042518	TNPO1	100	100.000	Pan_paniscus
ENSCATG00000043792	TNPO1	100	100.000	ENSPPRG00000022336	TNPO1	100	100.000	Panthera_pardus
ENSCATG00000043792	TNPO1	100	100.000	ENSPTIG00000018839	TNPO1	100	100.000	Panthera_tigris_altaica
ENSCATG00000043792	TNPO1	94	87.017	ENSPTRG00000047731	-	100	87.017	Pan_troglodytes
ENSCATG00000043792	TNPO1	100	100.000	ENSPTRG00000016972	TNPO1	100	100.000	Pan_troglodytes
ENSCATG00000043792	TNPO1	100	100.000	ENSPANG00000006074	TNPO1	100	100.000	Papio_anubis
ENSCATG00000043792	TNPO1	100	90.562	ENSPKIG00000019795	tnpo1	100	90.562	Paramormyrops_kingsleyae
ENSCATG00000043792	TNPO1	100	97.416	ENSPSIG00000014366	TNPO1	100	96.993	Pelodiscus_sinensis
ENSCATG00000043792	TNPO1	100	90.460	ENSPMGG00000017014	tnpo1	100	90.572	Periophthalmus_magnuspinnatus
ENSCATG00000043792	TNPO1	96	99.649	ENSPEMG00000007444	Tnpo1	100	99.649	Peromyscus_maniculatus_bairdii
ENSCATG00000043792	TNPO1	100	98.315	ENSPCIG00000026080	TNPO1	100	98.315	Phascolarctos_cinereus
ENSCATG00000043792	TNPO1	100	93.169	ENSPFOG00000011447	tnpo1	100	93.169	Poecilia_formosa
ENSCATG00000043792	TNPO1	100	93.169	ENSPLAG00000018696	tnpo1	100	93.169	Poecilia_latipinna
ENSCATG00000043792	TNPO1	100	93.371	ENSPMEG00000024121	tnpo1	100	93.371	Poecilia_mexicana
ENSCATG00000043792	TNPO1	100	93.274	ENSPREG00000020705	tnpo1	100	93.274	Poecilia_reticulata
ENSCATG00000043792	TNPO1	100	99.889	ENSPPYG00000015545	TNPO1	100	99.889	Pongo_abelii
ENSCATG00000043792	TNPO1	100	99.889	ENSPCOG00000004254	TNPO1	100	99.889	Propithecus_coquereli
ENSCATG00000043792	TNPO1	100	99.666	ENSPVAG00000013051	TNPO1	100	99.666	Pteropus_vampyrus
ENSCATG00000043792	TNPO1	100	92.929	ENSPNYG00000001522	tnpo1	100	92.929	Pundamilia_nyererei
ENSCATG00000043792	TNPO1	100	92.161	ENSPNAG00000021484	tnpo1	100	92.601	Pygocentrus_nattereri
ENSCATG00000043792	TNPO1	100	99.438	ENSRNOG00000014999	Tnpo1	100	99.438	Rattus_norvegicus
ENSCATG00000043792	TNPO1	100	100.000	ENSRBIG00000021642	TNPO1	100	100.000	Rhinopithecus_bieti
ENSCATG00000043792	TNPO1	100	100.000	ENSRROG00000035271	TNPO1	100	100.000	Rhinopithecus_roxellana
ENSCATG00000043792	TNPO1	100	99.666	ENSSBOG00000029256	TNPO1	100	99.666	Saimiri_boliviensis_boliviensis
ENSCATG00000043792	TNPO1	97	97.801	ENSSHAG00000007120	TNPO1	100	97.801	Sarcophilus_harrisii
ENSCATG00000043792	TNPO1	100	94.501	ENSSFOG00015015448	tnpo1	100	94.501	Scleropages_formosus
ENSCATG00000043792	TNPO1	96	93.458	ENSSMAG00000011202	tnpo1	97	93.458	Scophthalmus_maximus
ENSCATG00000043792	TNPO1	100	93.820	ENSSDUG00000007943	tnpo1	100	93.820	Seriola_dumerili
ENSCATG00000043792	TNPO1	100	93.820	ENSSLDG00000014578	tnpo1	100	93.820	Seriola_lalandi_dorsalis
ENSCATG00000043792	TNPO1	100	96.629	ENSSPUG00000000149	TNPO1	100	96.629	Sphenodon_punctatus
ENSCATG00000043792	TNPO1	100	93.933	ENSSPAG00000000258	tnpo1	100	93.933	Stegastes_partitus
ENSCATG00000043792	TNPO1	100	99.888	ENSSSCG00000027293	TNPO1	100	99.888	Sus_scrofa
ENSCATG00000043792	TNPO1	99	95.201	ENSTGUG00000005729	TNPO1	100	95.201	Taeniopygia_guttata
ENSCATG00000043792	TNPO1	100	92.921	ENSTRUG00000018491	tnpo1	100	92.921	Takifugu_rubripes
ENSCATG00000043792	TNPO1	78	88.799	ENSTNIG00000007483	tnpo1	100	88.799	Tetraodon_nigroviridis
ENSCATG00000043792	TNPO1	87	100.000	ENSTBEG00000007848	TNPO1	86	100.000	Tupaia_belangeri
ENSCATG00000043792	TNPO1	96	95.906	ENSTTRG00000000209	TNPO1	95	95.906	Tursiops_truncatus
ENSCATG00000043792	TNPO1	100	100.000	ENSUMAG00000007635	TNPO1	100	100.000	Ursus_maritimus
ENSCATG00000043792	TNPO1	100	95.991	ENSVPAG00000009601	TNPO1	100	95.991	Vicugna_pacos
ENSCATG00000043792	TNPO1	100	100.000	ENSVVUG00000007338	TNPO1	100	100.000	Vulpes_vulpes
ENSCATG00000043792	TNPO1	100	94.382	ENSXETG00000016812	tnpo1	99	94.382	Xenopus_tropicalis
ENSCATG00000043792	TNPO1	100	93.042	ENSXMAG00000005440	tnpo1	100	93.042	Xiphophorus_maculatus