EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000044451 (Gene tree)
Gene ID: 105589330
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 12084 bases
Position: chrKQ009875.1:270961-283044
Accession: 105589330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000043893	RRM_1	PF00076.22	8.4e-06	1	1
ENSCATP00000043889	RRM_1	PF00076.22	1.2e-05	1	1
ENSCATP00000043885	RRM_1	PF00076.22	2.1e-05	1	1
ENSCATP00000043884	RRM_1	PF00076.22	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000068325	RDM1-201	1174	XM_012067718	ENSCATP00000043884	284 (aa)	XP_011923108	A0A2K5P2A8
ENSCATT00000068334	RDM1-204	420	-	ENSCATP00000043893	139 (aa)	-	A0A2K5P2F6
ENSCATT00000068326	RDM1-202	1069	XM_012067720	ENSCATP00000043885	251 (aa)	XP_011923110	A0A2K5P2H6
ENSCATT00000068330	RDM1-203	501	-	ENSCATP00000043889	166 (aa)	-	A0A2K5P2C3

Gene Model

Click here to download ENSCATG00000044451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000044451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000044451	RDM1	100	96.403	ENSG00000278023	RDM1	100	97.015	Homo_sapiens
ENSCATG00000044451	RDM1	96	45.185	ENSAPOG00000021886	zgc:103564	84	34.783	Acanthochromis_polyacanthus
ENSCATG00000044451	RDM1	96	45.185	ENSAPEG00000008929	zgc:103564	92	33.730	Amphiprion_percula
ENSCATG00000044451	RDM1	73	67.327	ENSAPLG00000004384	RDM1	94	53.846	Anas_platyrhynchos
ENSCATG00000044451	RDM1	95	56.818	ENSACAG00000012989	-	100	50.178	Anolis_carolinensis
ENSCATG00000044451	RDM1	100	92.806	ENSANAG00000032752	RDM1	100	92.806	Aotus_nancymaae
ENSCATG00000044451	RDM1	100	89.630	ENSBTAG00000000030	RDM1	100	80.702	Bos_taurus
ENSCATG00000044451	RDM1	100	92.806	ENSCJAG00000015031	RDM1	100	92.806	Callithrix_jacchus
ENSCATG00000044451	RDM1	96	75.735	ENSCAFG00000015160	-	100	74.609	Canis_familiaris
ENSCATG00000044451	RDM1	98	88.148	ENSCHIG00000020607	RDM1	100	80.496	Capra_hircus
ENSCATG00000044451	RDM1	96	81.203	ENSCPOG00000001495	-	99	70.423	Cavia_porcellus
ENSCATG00000044451	RDM1	100	92.086	ENSCCAG00000035763	RDM1	100	92.086	Cebus_capucinus
ENSCATG00000044451	RDM1	94	94.737	ENSCSAG00000006209	RDM1	100	94.737	Chlorocebus_sabaeus
ENSCATG00000044451	RDM1	73	72.277	ENSCPBG00000009105	RDM1	93	55.918	Chrysemys_picta_bellii
ENSCATG00000044451	RDM1	100	98.008	ENSCANG00000041322	RDM1	100	98.008	Colobus_angolensis_palliatus
ENSCATG00000044451	RDM1	96	81.203	ENSCGRG00001015927	Rdm1	99	74.558	Cricetulus_griseus_chok1gshd
ENSCATG00000044451	RDM1	94	40.602	ENSCVAG00000001956	zgc:103564	96	35.955	Cyprinodon_variegatus
ENSCATG00000044451	RDM1	89	82.213	ENSDNOG00000045224	-	94	82.213	Dasypus_novemcinctus
ENSCATG00000044451	RDM1	73	90.196	ENSEASG00005010554	RDM1	69	81.959	Equus_asinus_asinus
ENSCATG00000044451	RDM1	96	91.729	ENSECAG00000022182	RDM1	91	82.353	Equus_caballus
ENSCATG00000044451	RDM1	81	82.178	ENSEEUG00000006127	RDM1	100	73.810	Erinaceus_europaeus
ENSCATG00000044451	RDM1	100	84.892	ENSFCAG00000043429	RDM1	100	84.892	Felis_catus
ENSCATG00000044451	RDM1	95	63.636	ENSGALG00000000243	RDM1	97	54.874	Gallus_gallus
ENSCATG00000044451	RDM1	73	71.287	ENSGAGG00000000293	-	78	55.020	Gopherus_agassizii
ENSCATG00000044451	RDM1	100	97.122	ENSGGOG00000010584	RDM1	100	97.122	Gorilla_gorilla
ENSCATG00000044451	RDM1	94	43.939	ENSHCOG00000002518	-	97	35.689	Hippocampus_comes
ENSCATG00000044451	RDM1	100	87.407	ENSSTOG00000022491	RDM1	100	83.451	Ictidomys_tridecemlineatus
ENSCATG00000044451	RDM1	96	87.970	ENSLAFG00000029300	RDM1	100	79.371	Loxodonta_africana
ENSCATG00000044451	RDM1	100	100.000	ENSMFAG00000032968	RDM1	100	100.000	Macaca_fascicularis
ENSCATG00000044451	RDM1	100	100.000	ENSMMUG00000006847	RDM1	100	100.000	Macaca_mulatta
ENSCATG00000044451	RDM1	100	100.000	ENSMNEG00000039977	RDM1	100	100.000	Macaca_nemestrina
ENSCATG00000044451	RDM1	100	100.000	ENSMLEG00000041158	RDM1	100	100.000	Mandrillus_leucophaeus
ENSCATG00000044451	RDM1	82	62.281	ENSMGAG00000008774	RDM1	96	55.510	Meleagris_gallopavo
ENSCATG00000044451	RDM1	99	80.000	ENSMAUG00000018559	Rdm1	99	73.944	Mesocricetus_auratus
ENSCATG00000044451	RDM1	100	91.852	ENSMICG00000038651	RDM1	100	90.580	Microcebus_murinus
ENSCATG00000044451	RDM1	96	78.947	ENSMOCG00000015095	Rdm1	99	70.290	Microtus_ochrogaster
ENSCATG00000044451	RDM1	95	72.727	ENSMODG00000011101	RDM1	100	64.130	Monodelphis_domestica
ENSCATG00000044451	RDM1	96	84.211	MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	Mus_caroli
ENSCATG00000044451	RDM1	96	83.459	ENSMUSG00000010362	Rdm1	99	73.929	Mus_musculus
ENSCATG00000044451	RDM1	99	83.704	MGP_PahariEiJ_G0018356	Rdm1	99	73.944	Mus_pahari
ENSCATG00000044451	RDM1	96	82.707	MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	Mus_spretus
ENSCATG00000044451	RDM1	100	88.148	ENSMPUG00000008363	RDM1	100	81.469	Mustela_putorius_furo
ENSCATG00000044451	RDM1	100	96.386	ENSNLEG00000014173	RDM1	100	96.386	Nomascus_leucogenys
ENSCATG00000044451	RDM1	95	72.727	ENSMEUG00000015826	RDM1	95	68.220	Notamacropus_eugenii
ENSCATG00000044451	RDM1	96	86.466	ENSOCUG00000022704	RDM1	99	77.273	Oryctolagus_cuniculus
ENSCATG00000044451	RDM1	100	85.185	ENSOGAG00000011332	RDM1	100	83.803	Otolemur_garnettii
ENSCATG00000044451	RDM1	100	97.037	ENSPPAG00000029969	RDM1	100	96.831	Pan_paniscus
ENSCATG00000044451	RDM1	100	97.842	ENSPTRG00000009031	RDM1	100	97.842	Pan_troglodytes
ENSCATG00000044451	RDM1	100	99.648	ENSPANG00000022933	RDM1	100	99.648	Papio_anubis
ENSCATG00000044451	RDM1	96	80.451	ENSPEMG00000018985	Rdm1	99	73.592	Peromyscus_maniculatus_bairdii
ENSCATG00000044451	RDM1	100	95.556	ENSPPYG00000008198	RDM1	100	95.423	Pongo_abelii
ENSCATG00000044451	RDM1	100	87.770	ENSPCOG00000017995	RDM1	100	87.770	Propithecus_coquereli
ENSCATG00000044451	RDM1	96	90.977	ENSPVAG00000001116	RDM1	100	85.259	Pteropus_vampyrus
ENSCATG00000044451	RDM1	96	83.459	ENSRNOG00000020751	Rdm1	99	73.571	Rattus_norvegicus
ENSCATG00000044451	RDM1	100	98.795	ENSRBIG00000030000	RDM1	100	98.795	Rhinopithecus_bieti
ENSCATG00000044451	RDM1	100	98.795	ENSRROG00000035242	RDM1	100	98.795	Rhinopithecus_roxellana
ENSCATG00000044451	RDM1	95	75.000	ENSSHAG00000013584	RDM1	100	66.667	Sarcophilus_harrisii
ENSCATG00000044451	RDM1	93	62.791	ENSSPUG00000010941	RDM1	94	54.340	Sphenodon_punctatus
ENSCATG00000044451	RDM1	94	47.794	ENSSPAG00000011690	-	95	36.604	Stegastes_partitus
ENSCATG00000044451	RDM1	81	81.250	ENSSSCG00000017574	-	93	72.768	Sus_scrofa
ENSCATG00000044451	RDM1	81	83.495	ENSTBEG00000010030	RDM1	99	63.095	Tupaia_belangeri
ENSCATG00000044451	RDM1	100	88.148	ENSUAMG00000027279	RDM1	100	83.099	Ursus_americanus
ENSCATG00000044451	RDM1	100	88.148	ENSUMAG00000015423	RDM1	98	83.099	Ursus_maritimus