EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCATG00000044797 (Gene tree)
Gene ID: 105573247
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Cercocebus_atys
Status: putative
Strand: Plus strand
Length: 28117 bases
Position: chrKQ011983.1:5745997-5774113
Accession: 105573247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCATP00000044653	zf-C2H2	PF00096.26	7e-19	1	2
ENSCATP00000044653	zf-C2H2	PF00096.26	7e-19	2	2
ENSCATP00000044653	zf-met	PF12874.7	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCATT00000069095	PRDM4-201	4323	XM_012032553	ENSCATP00000044653	801 (aa)	XP_011887943	A0A2K5P4L9

Gene Model

Click here to download ENSCATG00000044797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCATG00000044797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCATG00000044797	PRDM4	100	99.376	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSCATG00000044797	PRDM4	99	96.996	ENSAMEG00000016174	PRDM4	99	96.996	Ailuropoda_melanoleuca
ENSCATG00000044797	PRDM4	99	87.093	ENSAPLG00000009846	PRDM4	99	86.466	Anas_platyrhynchos
ENSCATG00000044797	PRDM4	100	98.752	ENSANAG00000024800	PRDM4	100	98.752	Aotus_nancymaae
ENSCATG00000044797	PRDM4	100	96.879	ENSBTAG00000012999	PRDM4	100	96.879	Bos_taurus
ENSCATG00000044797	PRDM4	100	98.252	ENSCJAG00000015261	PRDM4	100	98.252	Callithrix_jacchus
ENSCATG00000044797	PRDM4	100	97.004	ENSCAFG00000001788	PRDM4	100	97.004	Canis_familiaris
ENSCATG00000044797	PRDM4	100	97.004	ENSCAFG00020004916	PRDM4	100	97.004	Canis_lupus_dingo
ENSCATG00000044797	PRDM4	100	96.504	ENSCHIG00000019409	PRDM4	100	96.504	Capra_hircus
ENSCATG00000044797	PRDM4	100	97.503	ENSTSYG00000009248	PRDM4	100	97.503	Carlito_syrichta
ENSCATG00000044797	PRDM4	99	90.363	ENSCAPG00000013937	PRDM4	99	90.238	Cavia_aperea
ENSCATG00000044797	PRDM4	99	89.814	ENSCPOG00000022385	PRDM4	100	89.689	Cavia_porcellus
ENSCATG00000044797	PRDM4	100	98.876	ENSCCAG00000036033	PRDM4	100	98.876	Cebus_capucinus
ENSCATG00000044797	PRDM4	99	92.537	ENSCLAG00000007545	PRDM4	100	92.910	Chinchilla_lanigera
ENSCATG00000044797	PRDM4	100	99.501	ENSCSAG00000002896	PRDM4	100	99.501	Chlorocebus_sabaeus
ENSCATG00000044797	PRDM4	76	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSCATG00000044797	PRDM4	99	88.206	ENSCPBG00000023187	PRDM4	100	87.829	Chrysemys_picta_bellii
ENSCATG00000044797	PRDM4	100	99.376	ENSCANG00000021804	PRDM4	100	99.376	Colobus_angolensis_palliatus
ENSCATG00000044797	PRDM4	99	92.910	ENSCGRG00001015102	-	100	92.537	Cricetulus_griseus_chok1gshd
ENSCATG00000044797	PRDM4	96	92.903	ENSCGRG00000004044	-	100	92.516	Cricetulus_griseus_crigri
ENSCATG00000044797	PRDM4	100	96.380	ENSDNOG00000032478	PRDM4	100	96.418	Dasypus_novemcinctus
ENSCATG00000044797	PRDM4	99	81.807	ENSDORG00000015081	-	100	81.556	Dipodomys_ordii
ENSCATG00000044797	PRDM4	93	45.798	ENSEBUG00000003775	prdm4	99	46.047	Eptatretus_burgeri
ENSCATG00000044797	PRDM4	100	97.129	ENSECAG00000015423	PRDM4	100	97.129	Equus_caballus
ENSCATG00000044797	PRDM4	94	92.943	ENSEEUG00000006569	PRDM4	99	92.543	Erinaceus_europaeus
ENSCATG00000044797	PRDM4	99	60.510	ENSELUG00000015265	prdm4	99	60.753	Esox_lucius
ENSCATG00000044797	PRDM4	100	97.503	ENSFCAG00000022478	PRDM4	100	97.503	Felis_catus
ENSCATG00000044797	PRDM4	99	87.453	ENSFALG00000013342	PRDM4	100	86.951	Ficedula_albicollis
ENSCATG00000044797	PRDM4	100	86.675	ENSGALG00000012619	PRDM4	100	86.052	Gallus_gallus
ENSCATG00000044797	PRDM4	99	87.845	ENSGAGG00000002763	PRDM4	95	87.469	Gopherus_agassizii
ENSCATG00000044797	PRDM4	99	99.250	ENSGGOG00000001244	PRDM4	99	99.250	Gorilla_gorilla
ENSCATG00000044797	PRDM4	99	93.476	ENSHGLG00000004590	PRDM4	98	93.225	Heterocephalus_glaber_female
ENSCATG00000044797	PRDM4	99	92.422	ENSHGLG00100007464	PRDM4	100	92.174	Heterocephalus_glaber_male
ENSCATG00000044797	PRDM4	95	61.528	ENSIPUG00000024162	prdm4	93	61.880	Ictalurus_punctatus
ENSCATG00000044797	PRDM4	100	96.380	ENSSTOG00000016168	PRDM4	100	96.380	Ictidomys_tridecemlineatus
ENSCATG00000044797	PRDM4	82	93.548	ENSJJAG00000022448	-	95	93.548	Jaculus_jaculus
ENSCATG00000044797	PRDM4	99	72.525	ENSLACG00000007452	PRDM4	99	72.772	Latimeria_chalumnae
ENSCATG00000044797	PRDM4	78	41.953	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSCATG00000044797	PRDM4	98	96.447	ENSLAFG00000001483	PRDM4	100	96.447	Loxodonta_africana
ENSCATG00000044797	PRDM4	100	99.625	ENSMFAG00000041862	PRDM4	100	99.625	Macaca_fascicularis
ENSCATG00000044797	PRDM4	100	99.625	ENSMMUG00000015550	PRDM4	100	99.625	Macaca_mulatta
ENSCATG00000044797	PRDM4	100	99.376	ENSMNEG00000032319	PRDM4	100	99.376	Macaca_nemestrina
ENSCATG00000044797	PRDM4	100	99.501	ENSMLEG00000039607	PRDM4	100	99.501	Mandrillus_leucophaeus
ENSCATG00000044797	PRDM4	99	79.250	ENSMGAG00000012815	PRDM4	100	78.625	Meleagris_gallopavo
ENSCATG00000044797	PRDM4	100	96.255	ENSMICG00000007807	PRDM4	100	96.255	Microcebus_murinus
ENSCATG00000044797	PRDM4	99	93.860	ENSMOCG00000000753	Prdm4	99	93.609	Microtus_ochrogaster
ENSCATG00000044797	PRDM4	99	94.228	ENSMUSG00000035529	Prdm4	100	93.977	Mus_musculus
ENSCATG00000044797	PRDM4	99	93.601	MGP_PahariEiJ_G0031398	Prdm4	100	93.647	Mus_pahari
ENSCATG00000044797	PRDM4	99	94.856	MGP_SPRETEiJ_G0016505	Prdm4	100	94.917	Mus_spretus
ENSCATG00000044797	PRDM4	99	90.898	ENSMPUG00000012238	PRDM4	99	90.898	Mustela_putorius_furo
ENSCATG00000044797	PRDM4	99	96.742	ENSMLUG00000000767	PRDM4	99	96.742	Myotis_lucifugus
ENSCATG00000044797	PRDM4	99	95.483	ENSNGAG00000018627	Prdm4	100	95.483	Nannospalax_galili
ENSCATG00000044797	PRDM4	100	99.251	ENSNLEG00000006748	PRDM4	100	99.251	Nomascus_leucogenys
ENSCATG00000044797	PRDM4	89	89.437	ENSMEUG00000004495	PRDM4	89	89.437	Notamacropus_eugenii
ENSCATG00000044797	PRDM4	88	94.940	ENSOPRG00000010192	PRDM4	89	94.940	Ochotona_princeps
ENSCATG00000044797	PRDM4	99	90.250	ENSODEG00000014750	PRDM4	99	90.125	Octodon_degus
ENSCATG00000044797	PRDM4	100	90.637	ENSOANG00000005526	PRDM4	100	90.637	Ornithorhynchus_anatinus
ENSCATG00000044797	PRDM4	93	96.423	ENSOCUG00000012859	PRDM4	96	96.423	Oryctolagus_cuniculus
ENSCATG00000044797	PRDM4	99	97.491	ENSOGAG00000011945	PRDM4	100	97.491	Otolemur_garnettii
ENSCATG00000044797	PRDM4	100	96.255	ENSOARG00000017955	PRDM4	100	96.255	Ovis_aries
ENSCATG00000044797	PRDM4	100	99.376	ENSPPAG00000038438	PRDM4	100	99.376	Pan_paniscus
ENSCATG00000044797	PRDM4	100	97.503	ENSPPRG00000004144	PRDM4	100	97.503	Panthera_pardus
ENSCATG00000044797	PRDM4	100	97.503	ENSPTIG00000005847	PRDM4	100	97.503	Panthera_tigris_altaica
ENSCATG00000044797	PRDM4	100	99.376	ENSPTRG00000005400	PRDM4	100	99.376	Pan_troglodytes
ENSCATG00000044797	PRDM4	100	99.625	ENSPANG00000022084	PRDM4	100	99.625	Papio_anubis
ENSCATG00000044797	PRDM4	99	59.691	ENSPKIG00000000875	prdm4	99	60.404	Paramormyrops_kingsleyae
ENSCATG00000044797	PRDM4	91	81.369	ENSPSIG00000012066	PRDM4	100	81.369	Pelodiscus_sinensis
ENSCATG00000044797	PRDM4	99	95.232	ENSPEMG00000014598	Prdm4	100	95.232	Peromyscus_maniculatus_bairdii
ENSCATG00000044797	PRDM4	100	88.930	ENSPCIG00000009471	PRDM4	100	88.930	Phascolarctos_cinereus
ENSCATG00000044797	PRDM4	100	99.251	ENSPPYG00000004913	PRDM4	100	99.251	Pongo_abelii
ENSCATG00000044797	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSCATG00000044797	PRDM4	100	96.504	ENSPCOG00000021060	PRDM4	100	96.504	Propithecus_coquereli
ENSCATG00000044797	PRDM4	100	96.509	ENSPVAG00000001596	PRDM4	100	96.509	Pteropus_vampyrus
ENSCATG00000044797	PRDM4	99	93.609	ENSRNOG00000004962	Prdm4	100	93.358	Rattus_norvegicus
ENSCATG00000044797	PRDM4	100	99.376	ENSRBIG00000035488	PRDM4	100	99.376	Rhinopithecus_bieti
ENSCATG00000044797	PRDM4	100	99.501	ENSRROG00000012779	PRDM4	100	99.501	Rhinopithecus_roxellana
ENSCATG00000044797	PRDM4	100	98.752	ENSSBOG00000000403	PRDM4	100	98.752	Saimiri_boliviensis_boliviensis
ENSCATG00000044797	PRDM4	99	63.793	ENSSFOG00015023358	prdm4	99	63.793	Scleropages_formosus
ENSCATG00000044797	PRDM4	100	96.754	ENSSSCG00000000160	PRDM4	100	96.754	Sus_scrofa
ENSCATG00000044797	PRDM4	99	87.343	ENSTGUG00000010962	-	99	86.842	Taeniopygia_guttata
ENSCATG00000044797	PRDM4	73	89.761	ENSTBEG00000001732	PRDM4	84	89.761	Tupaia_belangeri
ENSCATG00000044797	PRDM4	100	96.504	ENSTTRG00000011056	PRDM4	100	96.504	Tursiops_truncatus
ENSCATG00000044797	PRDM4	100	97.378	ENSUAMG00000022796	PRDM4	100	97.378	Ursus_americanus
ENSCATG00000044797	PRDM4	100	97.378	ENSUMAG00000017231	PRDM4	100	97.378	Ursus_maritimus
ENSCATG00000044797	PRDM4	99	97.240	ENSVPAG00000002215	PRDM4	100	97.240	Vicugna_pacos
ENSCATG00000044797	PRDM4	100	97.004	ENSVVUG00000023397	PRDM4	100	97.004	Vulpes_vulpes