EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000000257 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 1545 bases
Position: chrKV389575.1:2379947-2381491
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000000059	RRM_1	PF00076.22	3.1e-08	1	1
ENSCCAP00000000057	RRM_1	PF00076.22	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000000359	-	417	-	ENSCCAP00000000059	138 (aa)	-	A0A2K5P8T9
ENSCCAT00000000337	-	237	-	ENSCCAP00000000057	78 (aa)	-	A0A2K5P8T8

Gene Model

Click here to download ENSCCAG00000000257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000000257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000000257	-	69	36.765	ENSCCAG00000029002	SRSF5	76	41.772
ENSCCAG00000000257	-	50	42.857	ENSCCAG00000026018	-	52	42.857
ENSCCAG00000000257	-	66	68.269	ENSCCAG00000025870	-	61	67.010
ENSCCAG00000000257	-	64	80.198	ENSCCAG00000032244	SRSF3	81	80.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000000257	-	66	64.835	ENSHGLG00000014661	-	54	68.293	Heterocephalus_glaber_female
ENSCCAG00000000257	-	66	64.835	ENSHGLG00100013969	-	54	68.293	Heterocephalus_glaber_male
ENSCCAG00000000257	-	66	69.474	ENSJJAG00000000726	-	57	68.182	Jaculus_jaculus
ENSCCAG00000000257	-	67	54.286	ENSMAUG00000012705	-	60	56.250	Mesocricetus_auratus
ENSCCAG00000000257	-	66	74.737	ENSODEG00000002374	-	63	78.161	Octodon_degus
ENSCCAG00000000257	-	73	57.522	ENSOANG00000015660	-	57	58.333	Ornithorhynchus_anatinus
ENSCCAG00000000257	-	83	43.750	ENSOGAG00000026571	-	58	54.023	Otolemur_garnettii