EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000000618 (Gene tree)
Gene ID: 108309803
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 24058 bases
Position: chrKV389523.1:101303-125360
Accession: 108309803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000000167	RtcB	PF01139.17	1.7e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000000971	RTCB-201	3622	XM_017536344	ENSCCAP00000000167	505 (aa)	XP_017391833	A0A2K5P953

Gene Model

Click here to download ENSCCAG00000000618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000000618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000000618	RTCB	100	99.604	ENSG00000100220	RTCB	100	99.604	Homo_sapiens
ENSCCAG00000000618	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSCCAG00000000618	RTCB	100	99.406	ENSAMEG00000016152	RTCB	100	99.406	Ailuropoda_melanoleuca
ENSCCAG00000000618	RTCB	100	90.099	ENSACIG00000009083	rtcb	100	90.099	Amphilophus_citrinellus
ENSCCAG00000000618	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSCCAG00000000618	RTCB	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSCCAG00000000618	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSCCAG00000000618	RTCB	100	94.653	ENSATEG00000000618	rtcb	100	94.653	Anabas_testudineus
ENSCCAG00000000618	RTCB	100	93.449	ENSACAG00000014817	RTCB	100	93.449	Anolis_carolinensis
ENSCCAG00000000618	RTCB	100	63.439	ENSANAG00000023724	-	100	63.439	Aotus_nancymaae
ENSCCAG00000000618	RTCB	100	83.960	ENSANAG00000018191	-	91	83.960	Aotus_nancymaae
ENSCCAG00000000618	RTCB	100	93.069	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSCCAG00000000618	RTCB	100	94.257	ENSAMXG00000042320	rtcb	100	94.257	Astyanax_mexicanus
ENSCCAG00000000618	RTCB	100	99.208	ENSBTAG00000011070	RTCB	100	99.208	Bos_taurus
ENSCCAG00000000618	RTCB	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSCCAG00000000618	RTCB	100	100.000	ENSCJAG00000006128	RTCB	100	100.000	Callithrix_jacchus
ENSCCAG00000000618	RTCB	100	99.406	ENSCAFG00000001785	RTCB	100	99.406	Canis_familiaris
ENSCCAG00000000618	RTCB	100	95.050	ENSCAFG00000010789	-	100	95.050	Canis_familiaris
ENSCCAG00000000618	RTCB	87	95.682	ENSCAFG00020018953	-	99	95.682	Canis_lupus_dingo
ENSCCAG00000000618	RTCB	100	99.406	ENSCAFG00020004890	-	100	99.406	Canis_lupus_dingo
ENSCCAG00000000618	RTCB	100	99.406	ENSCHIG00000027009	-	100	99.406	Capra_hircus
ENSCCAG00000000618	RTCB	100	99.208	ENSTSYG00000012320	RTCB	100	99.208	Carlito_syrichta
ENSCCAG00000000618	RTCB	94	98.952	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
ENSCCAG00000000618	RTCB	100	99.208	ENSCATG00000033424	RTCB	100	99.208	Cercocebus_atys
ENSCCAG00000000618	RTCB	100	99.010	ENSCLAG00000007997	RTCB	100	99.010	Chinchilla_lanigera
ENSCCAG00000000618	RTCB	100	99.406	ENSCSAG00000008351	RTCB	100	99.406	Chlorocebus_sabaeus
ENSCCAG00000000618	RTCB	100	85.149	ENSCHOG00000009123	RTCB	100	85.149	Choloepus_hoffmanni
ENSCCAG00000000618	RTCB	100	96.436	ENSCPBG00000023184	RTCB	100	96.436	Chrysemys_picta_bellii
ENSCCAG00000000618	RTCB	100	81.584	ENSCING00000003830	-	100	81.584	Ciona_intestinalis
ENSCCAG00000000618	RTCB	100	81.980	ENSCSAVG00000008124	-	99	81.980	Ciona_savignyi
ENSCCAG00000000618	RTCB	100	95.446	ENSCANG00000001891	RTCB	100	95.446	Colobus_angolensis_palliatus
ENSCCAG00000000618	RTCB	100	99.406	ENSCGRG00001011173	Rtcb	100	99.406	Cricetulus_griseus_chok1gshd
ENSCCAG00000000618	RTCB	93	99.788	ENSCGRG00000009587	-	96	99.788	Cricetulus_griseus_crigri
ENSCCAG00000000618	RTCB	100	94.059	ENSCSEG00000003986	rtcb	100	94.059	Cynoglossus_semilaevis
ENSCCAG00000000618	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSCCAG00000000618	RTCB	100	93.861	ENSDARG00000101047	rtcb	100	93.861	Danio_rerio
ENSCCAG00000000618	RTCB	80	96.806	ENSDNOG00000012425	RTCB	99	96.806	Dasypus_novemcinctus
ENSCCAG00000000618	RTCB	100	98.614	ENSDORG00000010855	Rtcb	100	98.614	Dipodomys_ordii
ENSCCAG00000000618	RTCB	99	85.487	FBgn0032781	RtcB	99	85.487	Drosophila_melanogaster
ENSCCAG00000000618	RTCB	100	92.673	ENSETEG00000001988	RTCB	100	92.673	Echinops_telfairi
ENSCCAG00000000618	RTCB	100	85.545	ENSEBUG00000014235	rtcb	100	85.545	Eptatretus_burgeri
ENSCCAG00000000618	RTCB	100	99.406	ENSEASG00005019059	RTCB	100	99.406	Equus_asinus_asinus
ENSCCAG00000000618	RTCB	100	99.406	ENSECAG00000023998	RTCB	100	99.406	Equus_caballus
ENSCCAG00000000618	RTCB	89	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSCCAG00000000618	RTCB	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSCCAG00000000618	RTCB	100	99.604	ENSFCAG00000026480	RTCB	100	99.604	Felis_catus
ENSCCAG00000000618	RTCB	100	97.426	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSCCAG00000000618	RTCB	100	99.406	ENSFDAG00000018150	RTCB	100	99.406	Fukomys_damarensis
ENSCCAG00000000618	RTCB	100	94.257	ENSFHEG00000009595	rtcb	100	94.257	Fundulus_heteroclitus
ENSCCAG00000000618	RTCB	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSCCAG00000000618	RTCB	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSCCAG00000000618	RTCB	100	94.653	ENSGAFG00000004198	rtcb	100	94.653	Gambusia_affinis
ENSCCAG00000000618	RTCB	100	93.663	ENSGACG00000000586	rtcb	100	93.663	Gasterosteus_aculeatus
ENSCCAG00000000618	RTCB	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSCCAG00000000618	RTCB	100	99.604	ENSGGOG00000011402	RTCB	100	99.604	Gorilla_gorilla
ENSCCAG00000000618	RTCB	100	93.069	ENSHBUG00000020571	rtcb	100	93.069	Haplochromis_burtoni
ENSCCAG00000000618	RTCB	100	99.406	ENSHGLG00000004492	RTCB	100	99.406	Heterocephalus_glaber_female
ENSCCAG00000000618	RTCB	93	70.551	ENSHGLG00000001066	-	99	70.551	Heterocephalus_glaber_female
ENSCCAG00000000618	RTCB	100	99.406	ENSHGLG00100008965	RTCB	100	99.406	Heterocephalus_glaber_male
ENSCCAG00000000618	RTCB	100	91.716	ENSHCOG00000006450	rtcb	100	91.716	Hippocampus_comes
ENSCCAG00000000618	RTCB	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSCCAG00000000618	RTCB	100	99.406	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSCCAG00000000618	RTCB	100	99.010	ENSJJAG00000010667	Rtcb	100	99.010	Jaculus_jaculus
ENSCCAG00000000618	RTCB	100	94.257	ENSKMAG00000013178	rtcb	100	94.257	Kryptolebias_marmoratus
ENSCCAG00000000618	RTCB	100	93.465	ENSLBEG00000000214	rtcb	100	93.465	Labrus_bergylta
ENSCCAG00000000618	RTCB	100	94.455	ENSLBEG00000010566	RTCB	100	94.455	Labrus_bergylta
ENSCCAG00000000618	RTCB	100	95.248	ENSLACG00000013033	RTCB	100	95.248	Latimeria_chalumnae
ENSCCAG00000000618	RTCB	100	94.455	ENSLOCG00000016515	rtcb	99	94.455	Lepisosteus_oculatus
ENSCCAG00000000618	RTCB	100	98.812	ENSLAFG00000002082	RTCB	100	98.812	Loxodonta_africana
ENSCCAG00000000618	RTCB	100	99.406	ENSMFAG00000034419	RTCB	100	99.406	Macaca_fascicularis
ENSCCAG00000000618	RTCB	100	99.406	ENSMMUG00000006720	RTCB	100	99.406	Macaca_mulatta
ENSCCAG00000000618	RTCB	100	99.406	ENSMNEG00000040669	RTCB	100	99.406	Macaca_nemestrina
ENSCCAG00000000618	RTCB	100	99.208	ENSMLEG00000040505	RTCB	100	99.208	Mandrillus_leucophaeus
ENSCCAG00000000618	RTCB	100	94.257	ENSMAMG00000020676	rtcb	100	94.257	Mastacembelus_armatus
ENSCCAG00000000618	RTCB	100	93.069	ENSMZEG00005018942	rtcb	100	93.069	Maylandia_zebra
ENSCCAG00000000618	RTCB	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSCCAG00000000618	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSCCAG00000000618	RTCB	100	79.802	ENSMICG00000036677	-	100	79.802	Microcebus_murinus
ENSCCAG00000000618	RTCB	100	99.802	ENSMICG00000013303	-	100	99.802	Microcebus_murinus
ENSCCAG00000000618	RTCB	100	99.406	ENSMOCG00000002440	Rtcb	100	99.406	Microtus_ochrogaster
ENSCCAG00000000618	RTCB	100	94.653	ENSMMOG00000005987	rtcb	100	94.653	Mola_mola
ENSCCAG00000000618	RTCB	100	98.020	ENSMODG00000001414	RTCB	100	98.020	Monodelphis_domestica
ENSCCAG00000000618	RTCB	100	94.851	ENSMALG00000007603	rtcb	100	94.851	Monopterus_albus
ENSCCAG00000000618	RTCB	100	99.802	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.802	Mus_caroli
ENSCCAG00000000618	RTCB	100	99.802	ENSMUSG00000001783	Rtcb	100	99.802	Mus_musculus
ENSCCAG00000000618	RTCB	100	99.802	MGP_PahariEiJ_G0031396	Rtcb	100	99.802	Mus_pahari
ENSCCAG00000000618	RTCB	100	99.802	MGP_SPRETEiJ_G0016507	Rtcb	100	99.802	Mus_spretus
ENSCCAG00000000618	RTCB	100	99.406	ENSMPUG00000012285	RTCB	100	99.406	Mustela_putorius_furo
ENSCCAG00000000618	RTCB	100	97.041	ENSMLUG00000007803	RTCB	100	97.041	Myotis_lucifugus
ENSCCAG00000000618	RTCB	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSCCAG00000000618	RTCB	100	93.267	ENSNBRG00000017202	rtcb	100	93.267	Neolamprologus_brichardi
ENSCCAG00000000618	RTCB	100	99.604	ENSNLEG00000004960	RTCB	100	99.604	Nomascus_leucogenys
ENSCCAG00000000618	RTCB	100	72.673	ENSMEUG00000007809	-	100	72.673	Notamacropus_eugenii
ENSCCAG00000000618	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSCCAG00000000618	RTCB	100	65.347	ENSODEG00000005042	-	100	65.347	Octodon_degus
ENSCCAG00000000618	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSCCAG00000000618	RTCB	100	94.257	ENSONIG00000007474	rtcb	100	94.257	Oreochromis_niloticus
ENSCCAG00000000618	RTCB	100	98.020	ENSOANG00000005524	RTCB	100	98.020	Ornithorhynchus_anatinus
ENSCCAG00000000618	RTCB	93	99.574	ENSOCUG00000008270	RTCB	96	99.574	Oryctolagus_cuniculus
ENSCCAG00000000618	RTCB	100	93.663	ENSORLG00000020093	rtcb	100	93.663	Oryzias_latipes
ENSCCAG00000000618	RTCB	100	93.663	ENSORLG00020003706	rtcb	100	93.663	Oryzias_latipes_hni
ENSCCAG00000000618	RTCB	100	93.861	ENSORLG00015002968	rtcb	100	93.861	Oryzias_latipes_hsok
ENSCCAG00000000618	RTCB	100	93.465	ENSOMEG00000021278	rtcb	100	93.465	Oryzias_melastigma
ENSCCAG00000000618	RTCB	100	99.208	ENSOGAG00000001425	RTCB	100	99.208	Otolemur_garnettii
ENSCCAG00000000618	RTCB	100	99.406	ENSOARG00000018008	RTCB	100	99.406	Ovis_aries
ENSCCAG00000000618	RTCB	100	99.604	ENSPPAG00000028667	RTCB	100	99.604	Pan_paniscus
ENSCCAG00000000618	RTCB	100	99.604	ENSPPRG00000004038	RTCB	100	99.604	Panthera_pardus
ENSCCAG00000000618	RTCB	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSCCAG00000000618	RTCB	100	99.604	ENSPTRG00000014287	RTCB	100	99.604	Pan_troglodytes
ENSCCAG00000000618	RTCB	100	99.406	ENSPANG00000016035	RTCB	100	99.406	Papio_anubis
ENSCCAG00000000618	RTCB	100	92.871	ENSPKIG00000001881	rtcb	100	92.871	Paramormyrops_kingsleyae
ENSCCAG00000000618	RTCB	91	98.043	ENSPSIG00000011690	RTCB	100	98.043	Pelodiscus_sinensis
ENSCCAG00000000618	RTCB	100	94.455	ENSPMGG00000016672	rtcb	100	94.455	Periophthalmus_magnuspinnatus
ENSCCAG00000000618	RTCB	100	99.802	ENSPEMG00000019548	Rtcb	100	99.802	Peromyscus_maniculatus_bairdii
ENSCCAG00000000618	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSCCAG00000000618	RTCB	100	98.416	ENSPCIG00000009467	RTCB	100	98.416	Phascolarctos_cinereus
ENSCCAG00000000618	RTCB	100	95.050	ENSPFOG00000003058	rtcb	100	95.050	Poecilia_formosa
ENSCCAG00000000618	RTCB	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSCCAG00000000618	RTCB	100	95.050	ENSPMEG00000006227	rtcb	100	95.050	Poecilia_mexicana
ENSCCAG00000000618	RTCB	100	94.851	ENSPREG00000018467	rtcb	100	94.851	Poecilia_reticulata
ENSCCAG00000000618	RTCB	100	99.604	ENSPPYG00000011752	RTCB	100	99.604	Pongo_abelii
ENSCCAG00000000618	RTCB	93	81.568	ENSPCAG00000013641	RTCB	100	81.568	Procavia_capensis
ENSCCAG00000000618	RTCB	100	99.604	ENSPCOG00000017243	RTCB	100	99.604	Propithecus_coquereli
ENSCCAG00000000618	RTCB	93	98.936	ENSPVAG00000002380	RTCB	100	98.936	Pteropus_vampyrus
ENSCCAG00000000618	RTCB	100	93.069	ENSPNYG00000022760	rtcb	100	93.069	Pundamilia_nyererei
ENSCCAG00000000618	RTCB	100	95.050	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSCCAG00000000618	RTCB	100	99.802	ENSRNOG00000004813	Rtcb	100	99.802	Rattus_norvegicus
ENSCCAG00000000618	RTCB	100	90.316	ENSRBIG00000042090	RTCB	100	90.316	Rhinopithecus_bieti
ENSCCAG00000000618	RTCB	100	95.050	ENSSBOG00000020085	-	100	95.050	Saimiri_boliviensis_boliviensis
ENSCCAG00000000618	RTCB	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSCCAG00000000618	RTCB	100	93.069	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSCCAG00000000618	RTCB	100	93.663	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSCCAG00000000618	RTCB	100	90.495	ENSSMAG00000005096	rtcb	100	90.495	Scophthalmus_maximus
ENSCCAG00000000618	RTCB	100	93.663	ENSSDUG00000012605	rtcb	100	93.663	Seriola_dumerili
ENSCCAG00000000618	RTCB	100	93.663	ENSSLDG00000019458	rtcb	100	93.663	Seriola_lalandi_dorsalis
ENSCCAG00000000618	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSCCAG00000000618	RTCB	100	95.842	ENSSPUG00000012814	RTCB	100	95.842	Sphenodon_punctatus
ENSCCAG00000000618	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSCCAG00000000618	RTCB	100	99.604	ENSSSCG00000000158	RTCB	100	99.604	Sus_scrofa
ENSCCAG00000000618	RTCB	100	97.426	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSCCAG00000000618	RTCB	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSCCAG00000000618	RTCB	100	93.267	ENSTNIG00000002484	rtcb	100	93.267	Tetraodon_nigroviridis
ENSCCAG00000000618	RTCB	100	85.743	ENSTBEG00000004418	RTCB	100	85.743	Tupaia_belangeri
ENSCCAG00000000618	RTCB	93	98.511	ENSTTRG00000006417	RTCB	100	98.511	Tursiops_truncatus
ENSCCAG00000000618	RTCB	100	99.406	ENSUAMG00000022792	RTCB	100	99.406	Ursus_americanus
ENSCCAG00000000618	RTCB	100	99.406	ENSUMAG00000017225	RTCB	100	99.406	Ursus_maritimus
ENSCCAG00000000618	RTCB	100	99.406	ENSVPAG00000005375	RTCB	100	99.406	Vicugna_pacos
ENSCCAG00000000618	RTCB	100	99.406	ENSVVUG00000023408	RTCB	100	99.509	Vulpes_vulpes
ENSCCAG00000000618	RTCB	100	94.455	ENSXETG00000011523	rtcb	100	94.455	Xenopus_tropicalis
ENSCCAG00000000618	RTCB	100	95.050	ENSXMAG00000002855	rtcb	100	95.050	Xiphophorus_maculatus