EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000001323 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 2686 bases
Position: chrKV389594.1:1435316-1438001
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000000318	DND1_DSRM	PF14709.7	9.2e-25	1	1
ENSCCAP00000000313	DND1_DSRM	PF14709.7	1e-24	1	1
ENSCCAP00000000318	RRM_1	PF00076.22	1.6e-21	1	1
ENSCCAP00000000313	RRM_1	PF00076.22	2.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000001794	-	1428	-	ENSCCAP00000000313	475 (aa)	-	A0A2K5P9K2
ENSCCAT00000001827	-	1281	-	ENSCCAP00000000318	426 (aa)	-	A0A2K5P9K6

Gene Model

Click here to download ENSCCAG00000001323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000001323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000001323	-	58	43.289	ENSCCAG00000022117	SYNCRIP	53	43.289
ENSCCAG00000001323	-	99	83.368	ENSCCAG00000027619	-	99	83.473
ENSCCAG00000001323	-	58	40.075	ENSCCAG00000017947	-	55	40.310
ENSCCAG00000001323	-	59	44.951	ENSCCAG00000023435	-	51	44.951
ENSCCAG00000001323	-	82	55.082	ENSCCAG00000018168	A1CF	68	55.082
ENSCCAG00000001323	-	58	58.667	ENSCCAG00000030129	-	76	58.667
ENSCCAG00000001323	-	56	33.962	ENSCCAG00000020065	DND1	75	33.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000001323	-	99	82.316	ENSG00000151962	RBM46	100	87.970	Homo_sapiens
ENSCCAG00000001323	-	94	55.000	ENSAPOG00000009209	rbm46	95	53.086	Acanthochromis_polyacanthus
ENSCCAG00000001323	-	100	79.925	ENSAMEG00000013290	RBM46	100	79.925	Ailuropoda_melanoleuca
ENSCCAG00000001323	-	98	50.000	ENSACIG00000014500	rbm46	91	50.420	Amphilophus_citrinellus
ENSCCAG00000001323	-	92	55.631	ENSAOCG00000001892	-	99	50.749	Amphiprion_ocellaris
ENSCCAG00000001323	-	92	55.631	ENSAPEG00000017762	rbm46	96	55.631	Amphiprion_percula
ENSCCAG00000001323	-	94	54.425	ENSATEG00000010775	rbm46	97	52.031	Anabas_testudineus
ENSCCAG00000001323	-	98	73.233	ENSAPLG00000005116	RBM46	100	73.233	Anas_platyrhynchos
ENSCCAG00000001323	-	100	72.233	ENSACAG00000015599	RBM46	100	72.233	Anolis_carolinensis
ENSCCAG00000001323	-	99	82.105	ENSANAG00000029193	RBM46	99	82.227	Aotus_nancymaae
ENSCCAG00000001323	-	95	53.004	ENSACLG00000016153	rbm46	94	49.818	Astatotilapia_calliptera
ENSCCAG00000001323	-	94	55.432	ENSAMXG00000009397	rbm46	98	55.432	Astyanax_mexicanus
ENSCCAG00000001323	-	95	51.805	ENSAMXG00000020892	-	99	50.190	Astyanax_mexicanus
ENSCCAG00000001323	-	99	80.632	ENSBTAG00000001696	RBM46	99	80.753	Bos_taurus
ENSCCAG00000001323	-	100	81.439	ENSCJAG00000001768	RBM46	100	81.439	Callithrix_jacchus
ENSCCAG00000001323	-	99	81.684	ENSCAFG00000008473	RBM46	99	81.799	Canis_familiaris
ENSCCAG00000001323	-	100	79.925	ENSCAFG00020002468	RBM46	100	79.925	Canis_lupus_dingo
ENSCCAG00000001323	-	99	80.842	ENSCHIG00000000502	RBM46	99	80.962	Capra_hircus
ENSCCAG00000001323	-	99	80.421	ENSTSYG00000010435	RBM46	99	80.544	Carlito_syrichta
ENSCCAG00000001323	-	75	73.984	ENSCAPG00000011841	-	99	73.984	Cavia_aperea
ENSCCAG00000001323	-	99	79.579	ENSCAPG00000011928	-	99	79.707	Cavia_aperea
ENSCCAG00000001323	-	99	76.695	ENSCPOG00000019272	-	100	74.907	Cavia_porcellus
ENSCCAG00000001323	-	99	78.390	ENSCPOG00000020396	-	99	76.389	Cavia_porcellus
ENSCCAG00000001323	-	99	79.579	ENSCPOG00000010284	-	99	79.707	Cavia_porcellus
ENSCCAG00000001323	-	99	82.105	ENSCATG00000040148	RBM46	99	82.218	Cercocebus_atys
ENSCCAG00000001323	-	99	78.947	ENSCLAG00000011886	-	99	78.278	Chinchilla_lanigera
ENSCCAG00000001323	-	99	80.000	ENSCLAG00000005846	-	99	80.126	Chinchilla_lanigera
ENSCCAG00000001323	-	100	80.113	ENSCSAG00000003263	RBM46	100	80.113	Chlorocebus_sabaeus
ENSCCAG00000001323	-	98	80.342	ENSCHOG00000003429	RBM46	100	78.612	Choloepus_hoffmanni
ENSCCAG00000001323	-	92	76.629	ENSCPBG00000009314	RBM46	97	76.629	Chrysemys_picta_bellii
ENSCCAG00000001323	-	99	81.684	ENSCANG00000039065	RBM46	99	81.628	Colobus_angolensis_palliatus
ENSCCAG00000001323	-	99	81.053	ENSCGRG00001016714	Rbm46	99	81.172	Cricetulus_griseus_chok1gshd
ENSCCAG00000001323	-	99	81.053	ENSCGRG00000011738	Rbm46	99	81.172	Cricetulus_griseus_crigri
ENSCCAG00000001323	-	93	48.322	ENSCSEG00000005530	rbm46	96	48.322	Cynoglossus_semilaevis
ENSCCAG00000001323	-	96	52.597	ENSCVAG00000021013	rbm46	96	52.442	Cyprinodon_variegatus
ENSCCAG00000001323	-	94	55.531	ENSDARG00000079452	rbm46	99	52.399	Danio_rerio
ENSCCAG00000001323	-	100	79.550	ENSDNOG00000016195	RBM46	100	79.550	Dasypus_novemcinctus
ENSCCAG00000001323	-	99	80.842	ENSDORG00000006405	Rbm46	99	80.962	Dipodomys_ordii
ENSCCAG00000001323	-	98	79.872	ENSETEG00000014902	RBM46	100	77.298	Echinops_telfairi
ENSCCAG00000001323	-	100	78.236	ENSEASG00005015821	RBM46	100	78.236	Equus_asinus_asinus
ENSCCAG00000001323	-	99	80.211	ENSECAG00000007649	RBM46	99	80.335	Equus_caballus
ENSCCAG00000001323	-	100	76.548	ENSEEUG00000011824	RBM46	100	76.548	Erinaceus_europaeus
ENSCCAG00000001323	-	74	59.128	ENSELUG00000008166	rbm46	94	59.128	Esox_lucius
ENSCCAG00000001323	-	99	81.263	ENSFCAG00000029812	RBM46	99	81.381	Felis_catus
ENSCCAG00000001323	-	99	70.488	ENSFALG00000013157	RBM46	97	68.699	Ficedula_albicollis
ENSCCAG00000001323	-	99	76.632	ENSFDAG00000006445	-	94	76.632	Fukomys_damarensis
ENSCCAG00000001323	-	100	75.235	ENSFDAG00000019281	-	100	75.235	Fukomys_damarensis
ENSCCAG00000001323	-	82	50.250	ENSFHEG00000013257	rbm46	87	50.250	Fundulus_heteroclitus
ENSCCAG00000001323	-	99	65.190	ENSGALG00000009278	RBM46	100	65.190	Gallus_gallus
ENSCCAG00000001323	-	55	62.718	ENSGAFG00000020245	rbm46	89	63.066	Gambusia_affinis
ENSCCAG00000001323	-	98	77.137	ENSGAGG00000002019	RBM46	95	73.347	Gopherus_agassizii
ENSCCAG00000001323	-	99	82.526	ENSGGOG00000001876	RBM46	99	82.636	Gorilla_gorilla
ENSCCAG00000001323	-	93	50.673	ENSHBUG00000009609	rbm46	91	54.545	Haplochromis_burtoni
ENSCCAG00000001323	-	97	64.811	ENSHGLG00000010742	-	99	64.881	Heterocephalus_glaber_female
ENSCCAG00000001323	-	99	69.913	ENSHGLG00000002940	-	100	67.899	Heterocephalus_glaber_female
ENSCCAG00000001323	-	100	70.913	ENSHGLG00000002463	-	99	77.829	Heterocephalus_glaber_female
ENSCCAG00000001323	-	99	78.526	ENSHGLG00100012752	-	99	78.870	Heterocephalus_glaber_male
ENSCCAG00000001323	-	97	64.811	ENSHGLG00100004977	-	99	64.881	Heterocephalus_glaber_male
ENSCCAG00000001323	-	99	66.017	ENSHGLG00100018987	-	99	64.384	Heterocephalus_glaber_male
ENSCCAG00000001323	-	97	42.918	ENSHCOG00000012998	rbm46	93	42.918	Hippocampus_comes
ENSCCAG00000001323	-	98	54.970	ENSIPUG00000024038	rbm46	96	55.165	Ictalurus_punctatus
ENSCCAG00000001323	-	99	81.895	ENSSTOG00000007918	RBM46	99	82.008	Ictidomys_tridecemlineatus
ENSCCAG00000001323	-	99	79.579	ENSJJAG00000003902	Rbm46	99	79.707	Jaculus_jaculus
ENSCCAG00000001323	-	97	53.586	ENSKMAG00000015127	rbm46	100	50.093	Kryptolebias_marmoratus
ENSCCAG00000001323	-	98	73.504	ENSLACG00000002062	RBM46	100	71.536	Latimeria_chalumnae
ENSCCAG00000001323	-	96	62.554	ENSLOCG00000008298	rbm46	97	63.135	Lepisosteus_oculatus
ENSCCAG00000001323	-	98	81.370	ENSLAFG00000015448	RBM46	99	81.370	Loxodonta_africana
ENSCCAG00000001323	-	99	82.526	ENSMFAG00000043485	RBM46	99	82.636	Macaca_fascicularis
ENSCCAG00000001323	-	99	82.526	ENSMMUG00000021147	RBM46	99	82.636	Macaca_mulatta
ENSCCAG00000001323	-	99	82.526	ENSMNEG00000002787	RBM46	99	82.636	Macaca_nemestrina
ENSCCAG00000001323	-	99	82.105	ENSMLEG00000029756	RBM46	99	82.218	Mandrillus_leucophaeus
ENSCCAG00000001323	-	93	55.778	ENSMAMG00000009093	rbm46	88	55.507	Mastacembelus_armatus
ENSCCAG00000001323	-	94	52.980	ENSMZEG00005027849	rbm46	97	52.842	Maylandia_zebra
ENSCCAG00000001323	-	98	65.885	ENSMGAG00000001457	RBM46	99	65.885	Meleagris_gallopavo
ENSCCAG00000001323	-	99	80.842	ENSMAUG00000009911	Rbm46	99	80.962	Mesocricetus_auratus
ENSCCAG00000001323	-	99	81.474	ENSMICG00000042747	RBM46	99	81.590	Microcebus_murinus
ENSCCAG00000001323	-	99	81.053	ENSMOCG00000001188	Rbm46	99	81.172	Microtus_ochrogaster
ENSCCAG00000001323	-	94	52.402	ENSMMOG00000011214	rbm46	97	50.096	Mola_mola
ENSCCAG00000001323	-	100	79.455	ENSMODG00000001302	RBM46	100	71.527	Monodelphis_domestica
ENSCCAG00000001323	-	91	52.036	ENSMALG00000006185	rbm46	94	52.596	Monopterus_albus
ENSCCAG00000001323	-	99	80.842	MGP_CAROLIEiJ_G0025101	Rbm46	99	80.962	Mus_caroli
ENSCCAG00000001323	-	99	80.842	ENSMUSG00000033882	Rbm46	99	80.962	Mus_musculus
ENSCCAG00000001323	-	99	80.842	MGP_PahariEiJ_G0026544	Rbm46	99	80.962	Mus_pahari
ENSCCAG00000001323	-	99	80.632	MGP_SPRETEiJ_G0026043	Rbm46	99	80.753	Mus_spretus
ENSCCAG00000001323	-	99	81.895	ENSMPUG00000005670	RBM46	99	82.008	Mustela_putorius_furo
ENSCCAG00000001323	-	100	78.839	ENSMLUG00000003221	RBM46	100	78.839	Myotis_lucifugus
ENSCCAG00000001323	-	99	80.421	ENSNGAG00000004231	Rbm46	99	80.544	Nannospalax_galili
ENSCCAG00000001323	-	93	54.260	ENSNBRG00000000273	rbm46	84	54.484	Neolamprologus_brichardi
ENSCCAG00000001323	-	99	82.737	ENSNLEG00000006184	RBM46	99	82.845	Nomascus_leucogenys
ENSCCAG00000001323	-	87	79.759	ENSMEUG00000013328	RBM46	99	79.759	Notamacropus_eugenii
ENSCCAG00000001323	-	54	82.239	ENSOPRG00000007136	RBM46	92	82.239	Ochotona_princeps
ENSCCAG00000001323	-	99	78.526	ENSODEG00000000735	-	99	78.661	Octodon_degus
ENSCCAG00000001323	-	99	79.158	ENSODEG00000018002	-	97	75.581	Octodon_degus
ENSCCAG00000001323	-	93	55.111	ENSONIG00000014096	rbm46	96	55.333	Oreochromis_niloticus
ENSCCAG00000001323	-	98	72.611	ENSOANG00000002141	RBM46	99	70.876	Ornithorhynchus_anatinus
ENSCCAG00000001323	-	100	79.925	ENSOCUG00000017859	RBM46	100	79.925	Oryctolagus_cuniculus
ENSCCAG00000001323	-	97	52.110	ENSORLG00000002429	rbm46	97	49.174	Oryzias_latipes
ENSCCAG00000001323	-	97	51.681	ENSORLG00020022154	rbm46	97	48.807	Oryzias_latipes_hni
ENSCCAG00000001323	-	97	52.000	ENSORLG00015020234	rbm46	94	52.632	Oryzias_latipes_hsok
ENSCCAG00000001323	-	92	50.442	ENSOMEG00000022580	rbm46	99	48.204	Oryzias_melastigma
ENSCCAG00000001323	-	100	80.300	ENSOGAG00000005647	RBM46	100	80.300	Otolemur_garnettii
ENSCCAG00000001323	-	99	81.053	ENSOARG00000016406	RBM46	99	81.172	Ovis_aries
ENSCCAG00000001323	-	99	82.526	ENSPPAG00000043236	RBM46	99	82.636	Pan_paniscus
ENSCCAG00000001323	-	99	81.053	ENSPPRG00000009416	RBM46	99	81.172	Panthera_pardus
ENSCCAG00000001323	-	99	81.053	ENSPTIG00000017449	RBM46	99	81.172	Panthera_tigris_altaica
ENSCCAG00000001323	-	99	82.526	ENSPTRG00000016538	RBM46	99	82.636	Pan_troglodytes
ENSCCAG00000001323	-	99	82.526	ENSPANG00000004186	RBM46	99	82.636	Papio_anubis
ENSCCAG00000001323	-	95	59.211	ENSPKIG00000015334	rbm46	90	55.048	Paramormyrops_kingsleyae
ENSCCAG00000001323	-	99	76.582	ENSPSIG00000006429	RBM46	98	76.042	Pelodiscus_sinensis
ENSCCAG00000001323	-	93	53.052	ENSPMGG00000019872	rbm46	92	54.098	Periophthalmus_magnuspinnatus
ENSCCAG00000001323	-	99	81.053	ENSPEMG00000013899	Rbm46	99	81.172	Peromyscus_maniculatus_bairdii
ENSCCAG00000001323	-	99	80.421	ENSPCIG00000029626	RBM46	99	80.544	Phascolarctos_cinereus
ENSCCAG00000001323	-	94	61.695	ENSPFOG00000001079	rbm46	95	62.034	Poecilia_formosa
ENSCCAG00000001323	-	98	52.510	ENSPLAG00000004541	rbm46	98	48.668	Poecilia_latipinna
ENSCCAG00000001323	-	98	52.510	ENSPMEG00000015724	rbm46	98	48.668	Poecilia_mexicana
ENSCCAG00000001323	-	98	52.510	ENSPREG00000014464	rbm46	95	54.425	Poecilia_reticulata
ENSCCAG00000001323	-	100	80.300	ENSPPYG00000015144	RBM46	100	80.300	Pongo_abelii
ENSCCAG00000001323	-	98	76.129	ENSPCAG00000003110	RBM46	99	74.151	Procavia_capensis
ENSCCAG00000001323	-	99	80.632	ENSPCOG00000024347	RBM46	99	80.962	Propithecus_coquereli
ENSCCAG00000001323	-	100	79.550	ENSPVAG00000008376	RBM46	100	79.550	Pteropus_vampyrus
ENSCCAG00000001323	-	93	57.143	ENSPNAG00000025312	rbm46	99	53.537	Pygocentrus_nattereri
ENSCCAG00000001323	-	100	79.174	ENSRNOG00000025823	Rbm46	100	79.174	Rattus_norvegicus
ENSCCAG00000001323	-	99	81.895	ENSRBIG00000032583	RBM46	99	82.008	Rhinopithecus_bieti
ENSCCAG00000001323	-	99	81.684	ENSRROG00000044288	RBM46	99	81.799	Rhinopithecus_roxellana
ENSCCAG00000001323	-	99	83.158	ENSSBOG00000033028	RBM46	99	83.264	Saimiri_boliviensis_boliviensis
ENSCCAG00000001323	-	100	78.612	ENSSHAG00000012596	RBM46	100	78.612	Sarcophilus_harrisii
ENSCCAG00000001323	-	96	59.913	ENSSFOG00015000087	rbm46	98	58.574	Scleropages_formosus
ENSCCAG00000001323	-	99	50.955	ENSSMAG00000017042	rbm46	98	50.955	Scophthalmus_maximus
ENSCCAG00000001323	-	95	55.531	ENSSDUG00000020645	rbm46	89	55.531	Seriola_dumerili
ENSCCAG00000001323	-	98	81.624	ENSSARG00000006520	RBM46	100	79.550	Sorex_araneus
ENSCCAG00000001323	-	98	77.564	ENSSPUG00000012525	-	100	75.047	Sphenodon_punctatus
ENSCCAG00000001323	-	99	76.008	ENSSPUG00000004773	-	99	75.365	Sphenodon_punctatus
ENSCCAG00000001323	-	96	51.410	ENSSPAG00000013697	rbm46	96	51.627	Stegastes_partitus
ENSCCAG00000001323	-	99	81.474	ENSSSCG00000008994	RBM46	99	81.590	Sus_scrofa
ENSCCAG00000001323	-	98	69.379	ENSTGUG00000005307	RBM46	100	69.379	Taeniopygia_guttata
ENSCCAG00000001323	-	95	52.643	ENSTRUG00000004237	rbm46	91	52.643	Takifugu_rubripes
ENSCCAG00000001323	-	95	49.893	ENSTNIG00000008714	rbm46	85	50.107	Tetraodon_nigroviridis
ENSCCAG00000001323	-	98	79.274	ENSTBEG00000013949	RBM46	100	76.548	Tupaia_belangeri
ENSCCAG00000001323	-	98	80.128	ENSTTRG00000001239	RBM46	100	78.049	Tursiops_truncatus
ENSCCAG00000001323	-	99	81.895	ENSUAMG00000026593	RBM46	99	82.008	Ursus_americanus
ENSCCAG00000001323	-	99	81.684	ENSUMAG00000016442	RBM46	99	81.799	Ursus_maritimus
ENSCCAG00000001323	-	99	81.895	ENSVVUG00000024957	RBM46	99	82.008	Vulpes_vulpes
ENSCCAG00000001323	-	99	45.438	ENSXETG00000032344	-	99	45.438	Xenopus_tropicalis
ENSCCAG00000001323	-	73	58.074	ENSXETG00000032067	-	98	60.057	Xenopus_tropicalis
ENSCCAG00000001323	-	98	63.812	ENSXETG00000022412	-	99	61.090	Xenopus_tropicalis
ENSCCAG00000001323	-	93	53.595	ENSXMAG00000008237	rbm46	92	52.720	Xiphophorus_maculatus