EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000005390 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 360 bases
Position: chrKV389572.1:344214-344573
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000000833	LSM	PF01423.22	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000005684	-	360	-	ENSCCAP00000000833	119 (aa)	-	A0A2K5PB16

Gene Model

Click here to download ENSCCAG00000005390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000005390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000005390	-	81	94.792	ENSCCAG00000020611	-	81	94.792
ENSCCAG00000005390	-	81	91.667	ENSCCAG00000016652	-	81	91.667
ENSCCAG00000005390	-	81	95.833	ENSCCAG00000032658	SNRPD1	81	95.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000005390	-	81	95.833	ENSG00000167088	SNRPD1	100	97.333	Homo_sapiens
ENSCCAG00000005390	-	81	91.667	ENSAPOG00000019446	snrpd1	52	91.667	Acanthochromis_polyacanthus
ENSCCAG00000005390	-	79	93.617	ENSAMEG00000002576	SNRPD1	80	93.617	Ailuropoda_melanoleuca
ENSCCAG00000005390	-	75	92.135	ENSACIG00000011263	snrpd1	79	92.135	Amphilophus_citrinellus
ENSCCAG00000005390	-	81	91.667	ENSAOCG00000007406	snrpd1	81	91.667	Amphiprion_ocellaris
ENSCCAG00000005390	-	81	86.458	ENSAPEG00000014961	snrpd1	80	86.458	Amphiprion_percula
ENSCCAG00000005390	-	75	92.135	ENSAPEG00000012539	SNRPD1	79	92.135	Amphiprion_percula
ENSCCAG00000005390	-	81	91.667	ENSATEG00000014399	snrpd1	81	91.667	Anabas_testudineus
ENSCCAG00000005390	-	77	95.652	ENSAPLG00000012256	SNRPD1	77	95.652	Anas_platyrhynchos
ENSCCAG00000005390	-	81	95.833	ENSACAG00000006364	SNRPD1	81	95.833	Anolis_carolinensis
ENSCCAG00000005390	-	81	95.833	ENSANAG00000025641	SNRPD1	81	95.833	Aotus_nancymaae
ENSCCAG00000005390	-	75	92.135	ENSACLG00000017406	snrpd1	79	92.135	Astatotilapia_calliptera
ENSCCAG00000005390	-	81	92.708	ENSAMXG00000004589	snrpd1	81	92.708	Astyanax_mexicanus
ENSCCAG00000005390	-	79	90.426	ENSBTAG00000055316	-	81	90.426	Bos_taurus
ENSCCAG00000005390	-	81	95.833	ENSBTAG00000008292	SNRPD1	81	95.833	Bos_taurus
ENSCCAG00000005390	-	81	91.667	ENSBTAG00000047266	-	81	91.667	Bos_taurus
ENSCCAG00000005390	-	81	93.750	ENSBTAG00000012376	-	72	93.750	Bos_taurus
ENSCCAG00000005390	-	74	76.136	WBGene00004916	snr-3	76	71.875	Caenorhabditis_elegans
ENSCCAG00000005390	-	81	95.833	ENSCJAG00000042955	SNRPD1	81	95.833	Callithrix_jacchus
ENSCCAG00000005390	-	81	95.833	ENSCAFG00000018247	SNRPD1	81	95.833	Canis_familiaris
ENSCCAG00000005390	-	80	95.789	ENSCAFG00020015914	SNRPD1	74	95.789	Canis_lupus_dingo
ENSCCAG00000005390	-	81	92.708	ENSCHIG00000005557	SNRPD1	79	94.681	Capra_hircus
ENSCCAG00000005390	-	81	95.833	ENSTSYG00000030028	SNRPD1	81	95.833	Carlito_syrichta
ENSCCAG00000005390	-	77	94.565	ENSCAPG00000008103	SNRPD1	79	94.565	Cavia_aperea
ENSCCAG00000005390	-	81	95.833	ENSCPOG00000004679	SNRPD1	81	95.833	Cavia_porcellus
ENSCCAG00000005390	-	81	95.833	ENSCATG00000039978	SNRPD1	81	95.833	Cercocebus_atys
ENSCCAG00000005390	-	81	95.833	ENSCLAG00000008691	SNRPD1	81	95.833	Chinchilla_lanigera
ENSCCAG00000005390	-	81	95.833	ENSCSAG00000017654	SNRPD1	81	95.833	Chlorocebus_sabaeus
ENSCCAG00000005390	-	81	95.833	ENSCPBG00000023143	SNRPD1	81	95.833	Chrysemys_picta_bellii
ENSCCAG00000005390	-	72	82.558	ENSCING00000024100	-	69	82.558	Ciona_intestinalis
ENSCCAG00000005390	-	73	80.460	ENSCSAVG00000004578	-	70	80.460	Ciona_savignyi
ENSCCAG00000005390	-	81	95.833	ENSCGRG00001021055	-	81	95.833	Cricetulus_griseus_chok1gshd
ENSCCAG00000005390	-	87	73.077	ENSCGRG00001009945	-	93	73.077	Cricetulus_griseus_chok1gshd
ENSCCAG00000005390	-	81	95.833	ENSCGRG00000000490	-	81	95.833	Cricetulus_griseus_crigri
ENSCCAG00000005390	-	87	73.077	ENSCGRG00000006224	-	93	73.077	Cricetulus_griseus_crigri
ENSCCAG00000005390	-	80	90.526	ENSCSEG00000018141	snrpd1	81	90.625	Cynoglossus_semilaevis
ENSCCAG00000005390	-	81	91.667	ENSCVAG00000000534	snrpd1	81	91.667	Cyprinodon_variegatus
ENSCCAG00000005390	-	81	92.708	ENSDARG00000011648	snrpd1	96	91.209	Danio_rerio
ENSCCAG00000005390	-	81	95.833	ENSDNOG00000040310	SNRPD1	81	95.833	Dasypus_novemcinctus
ENSCCAG00000005390	-	81	95.833	ENSDORG00000008349	Snrpd1	81	95.833	Dipodomys_ordii
ENSCCAG00000005390	-	79	78.723	FBgn0261933	SmD1	76	78.723	Drosophila_melanogaster
ENSCCAG00000005390	-	74	96.591	ENSETEG00000011689	SNRPD1	74	96.591	Echinops_telfairi
ENSCCAG00000005390	-	87	84.466	ENSEBUG00000003170	snrpd1	93	89.362	Eptatretus_burgeri
ENSCCAG00000005390	-	94	96.429	ENSEASG00005002433	SNRPD1	100	96.429	Equus_asinus_asinus
ENSCCAG00000005390	-	94	96.429	ENSECAG00000014373	SNRPD1	100	96.429	Equus_caballus
ENSCCAG00000005390	-	75	95.506	ENSEEUG00000004987	SNRPD1	100	95.506	Erinaceus_europaeus
ENSCCAG00000005390	-	93	81.982	ENSELUG00000000088	snrpd1	79	91.489	Esox_lucius
ENSCCAG00000005390	-	81	95.833	ENSFCAG00000012352	SNRPD1	81	95.833	Felis_catus
ENSCCAG00000005390	-	94	96.429	ENSFALG00000002646	SNRPD1	100	96.429	Ficedula_albicollis
ENSCCAG00000005390	-	81	92.708	ENSGMOG00000015607	snrpd1	81	92.708	Gadus_morhua
ENSCCAG00000005390	-	81	95.833	ENSGALG00000041334	SNRPD1	81	95.833	Gallus_gallus
ENSCCAG00000005390	-	81	91.667	ENSGAFG00000011171	snrpd1	81	91.667	Gambusia_affinis
ENSCCAG00000005390	-	81	92.708	ENSGACG00000005201	SNRPD1	81	92.708	Gasterosteus_aculeatus
ENSCCAG00000005390	-	81	95.833	ENSGAGG00000011197	SNRPD1	81	95.833	Gopherus_agassizii
ENSCCAG00000005390	-	81	90.625	ENSGGOG00000026706	-	80	90.625	Gorilla_gorilla
ENSCCAG00000005390	-	81	95.833	ENSGGOG00000041053	SNRPD1	81	95.833	Gorilla_gorilla
ENSCCAG00000005390	-	81	91.667	ENSHBUG00000003236	snrpd1	81	91.667	Haplochromis_burtoni
ENSCCAG00000005390	-	81	95.833	ENSHGLG00000007152	SNRPD1	81	95.833	Heterocephalus_glaber_female
ENSCCAG00000005390	-	81	95.833	ENSHGLG00100008618	SNRPD1	81	95.833	Heterocephalus_glaber_male
ENSCCAG00000005390	-	81	91.667	ENSIPUG00000003576	snrpd1	81	91.667	Ictalurus_punctatus
ENSCCAG00000005390	-	81	95.833	ENSSTOG00000000485	SNRPD1	81	95.833	Ictidomys_tridecemlineatus
ENSCCAG00000005390	-	81	95.833	ENSJJAG00000017698	Snrpd1	81	95.833	Jaculus_jaculus
ENSCCAG00000005390	-	81	91.667	ENSKMAG00000005987	snrpd1	81	91.667	Kryptolebias_marmoratus
ENSCCAG00000005390	-	81	91.667	ENSLBEG00000003327	snrpd1	81	91.667	Labrus_bergylta
ENSCCAG00000005390	-	81	95.833	ENSLACG00000001955	SNRPD1	81	95.833	Latimeria_chalumnae
ENSCCAG00000005390	-	79	92.553	ENSLOCG00000002003	snrpd1	80	92.553	Lepisosteus_oculatus
ENSCCAG00000005390	-	80	93.684	ENSLAFG00000005819	SNRPD1	81	93.684	Loxodonta_africana
ENSCCAG00000005390	-	81	95.833	ENSMFAG00000042080	SNRPD1	81	95.833	Macaca_fascicularis
ENSCCAG00000005390	-	96	95.614	ENSMMUG00000003992	SNRPD1	97	95.614	Macaca_mulatta
ENSCCAG00000005390	-	81	95.833	ENSMNEG00000041296	SNRPD1	81	95.833	Macaca_nemestrina
ENSCCAG00000005390	-	81	95.833	ENSMLEG00000028659	SNRPD1	81	95.833	Mandrillus_leucophaeus
ENSCCAG00000005390	-	81	91.667	ENSMAMG00000012971	snrpd1	81	91.667	Mastacembelus_armatus
ENSCCAG00000005390	-	81	91.667	ENSMZEG00005004685	snrpd1	81	91.667	Maylandia_zebra
ENSCCAG00000005390	-	77	95.652	ENSMGAG00000011598	SNRPD1	76	95.652	Meleagris_gallopavo
ENSCCAG00000005390	-	81	82.292	ENSMAUG00000016467	-	86	82.292	Mesocricetus_auratus
ENSCCAG00000005390	-	81	82.292	ENSMAUG00000016502	-	86	82.292	Mesocricetus_auratus
ENSCCAG00000005390	-	83	88.889	ENSMAUG00000006829	-	60	93.478	Mesocricetus_auratus
ENSCCAG00000005390	-	81	95.833	ENSMICG00000044066	SNRPD1	81	95.833	Microcebus_murinus
ENSCCAG00000005390	-	96	95.614	ENSMOCG00000017367	Snrpd1	94	95.614	Microtus_ochrogaster
ENSCCAG00000005390	-	81	91.667	ENSMMOG00000019089	snrpd1	81	91.667	Mola_mola
ENSCCAG00000005390	-	96	95.614	ENSMODG00000021487	SNRPD1	98	95.614	Monodelphis_domestica
ENSCCAG00000005390	-	81	91.667	ENSMALG00000014459	snrpd1	81	91.667	Monopterus_albus
ENSCCAG00000005390	-	81	95.833	MGP_CAROLIEiJ_G0021994	Snrpd1	81	95.833	Mus_caroli
ENSCCAG00000005390	-	81	95.833	ENSMUSG00000002477	Snrpd1	81	95.833	Mus_musculus
ENSCCAG00000005390	-	81	95.833	MGP_PahariEiJ_G0018731	Snrpd1	81	95.833	Mus_pahari
ENSCCAG00000005390	-	81	95.833	MGP_SPRETEiJ_G0022910	Snrpd1	81	95.833	Mus_spretus
ENSCCAG00000005390	-	86	95.098	ENSMPUG00000020041	-	86	95.098	Mustela_putorius_furo
ENSCCAG00000005390	-	79	93.617	ENSMPUG00000005567	-	80	93.617	Mustela_putorius_furo
ENSCCAG00000005390	-	79	94.681	ENSMLUG00000009124	SNRPD1	73	94.681	Myotis_lucifugus
ENSCCAG00000005390	-	81	95.833	ENSNGAG00000023946	Snrpd1	81	95.833	Nannospalax_galili
ENSCCAG00000005390	-	79	91.489	ENSNBRG00000012119	snrpd1	78	91.489	Neolamprologus_brichardi
ENSCCAG00000005390	-	100	94.118	ENSNLEG00000031430	SNRPD1	100	94.118	Nomascus_leucogenys
ENSCCAG00000005390	-	81	95.833	ENSODEG00000005764	SNRPD1	81	95.833	Octodon_degus
ENSCCAG00000005390	-	81	91.667	ENSONIG00000002486	snrpd1	81	91.667	Oreochromis_niloticus
ENSCCAG00000005390	-	82	86.735	ENSOANG00000004638	-	82	86.735	Ornithorhynchus_anatinus
ENSCCAG00000005390	-	86	95.098	ENSOCUG00000014399	-	86	95.098	Oryctolagus_cuniculus
ENSCCAG00000005390	-	79	93.617	ENSOCUG00000023761	-	80	93.617	Oryctolagus_cuniculus
ENSCCAG00000005390	-	75	92.135	ENSORLG00000012516	snrpd1	79	92.135	Oryzias_latipes
ENSCCAG00000005390	-	81	91.667	ENSORLG00020005743	snrpd1	81	91.667	Oryzias_latipes_hni
ENSCCAG00000005390	-	81	91.667	ENSORLG00015013402	snrpd1	81	91.667	Oryzias_latipes_hsok
ENSCCAG00000005390	-	81	91.667	ENSOMEG00000011571	snrpd1	81	91.667	Oryzias_melastigma
ENSCCAG00000005390	-	81	91.667	ENSOGAG00000007833	SNRPD1	79	93.617	Otolemur_garnettii
ENSCCAG00000005390	-	81	95.833	ENSOARG00000003413	-	72	95.833	Ovis_aries
ENSCCAG00000005390	-	81	95.833	ENSPPAG00000042593	SNRPD1	81	95.833	Pan_paniscus
ENSCCAG00000005390	-	81	95.833	ENSPPRG00000002399	SNRPD1	81	95.833	Panthera_pardus
ENSCCAG00000005390	-	86	67.647	ENSPPRG00000005009	-	82	67.647	Panthera_pardus
ENSCCAG00000005390	-	96	95.614	ENSPTIG00000013206	SNRPD1	100	95.614	Panthera_tigris_altaica
ENSCCAG00000005390	-	86	92.157	ENSPTRG00000050159	-	87	92.157	Pan_troglodytes
ENSCCAG00000005390	-	88	89.524	ENSPTRG00000009909	SNRPD1	81	95.833	Pan_troglodytes
ENSCCAG00000005390	-	81	95.833	ENSPANG00000023478	SNRPD1	81	95.833	Papio_anubis
ENSCCAG00000005390	-	75	91.011	ENSPKIG00000021610	snrpd1	79	92.045	Paramormyrops_kingsleyae
ENSCCAG00000005390	-	81	92.708	ENSPKIG00000003985	SNRPD1	81	92.708	Paramormyrops_kingsleyae
ENSCCAG00000005390	-	81	91.667	ENSPMGG00000001862	snrpd1	81	91.667	Periophthalmus_magnuspinnatus
ENSCCAG00000005390	-	81	95.833	ENSPEMG00000014773	-	81	95.833	Peromyscus_maniculatus_bairdii
ENSCCAG00000005390	-	86	80.769	ENSPMAG00000003938	-	85	80.769	Petromyzon_marinus
ENSCCAG00000005390	-	94	96.429	ENSPCIG00000020320	SNRPD1	100	96.429	Phascolarctos_cinereus
ENSCCAG00000005390	-	81	91.667	ENSPFOG00000012448	SNRPD1	85	91.667	Poecilia_formosa
ENSCCAG00000005390	-	81	91.667	ENSPLAG00000006738	snrpd1	85	91.667	Poecilia_latipinna
ENSCCAG00000005390	-	81	91.667	ENSPMEG00000021942	snrpd1	85	91.667	Poecilia_mexicana
ENSCCAG00000005390	-	81	91.667	ENSPREG00000007094	snrpd1	81	91.667	Poecilia_reticulata
ENSCCAG00000005390	-	81	95.833	ENSPPYG00000025874	SNRPD1	81	95.833	Pongo_abelii
ENSCCAG00000005390	-	81	95.833	ENSPCOG00000013327	SNRPD1	81	95.833	Propithecus_coquereli
ENSCCAG00000005390	-	81	95.833	ENSPVAG00000005511	SNRPD1	64	95.833	Pteropus_vampyrus
ENSCCAG00000005390	-	81	91.667	ENSPNAG00000017824	snrpd1	81	91.667	Pygocentrus_nattereri
ENSCCAG00000005390	-	81	95.833	ENSRNOG00000013714	Snrpd1	81	95.833	Rattus_norvegicus
ENSCCAG00000005390	-	81	95.833	ENSRBIG00000022996	SNRPD1	81	95.833	Rhinopithecus_bieti
ENSCCAG00000005390	-	81	95.833	ENSRROG00000027640	SNRPD1	81	95.833	Rhinopithecus_roxellana
ENSCCAG00000005390	-	81	95.833	ENSSBOG00000020998	SNRPD1	81	95.833	Saimiri_boliviensis_boliviensis
ENSCCAG00000005390	-	81	95.833	ENSSHAG00000011791	SNRPD1	81	95.833	Sarcophilus_harrisii
ENSCCAG00000005390	-	81	90.625	ENSSFOG00015008809	-	81	90.625	Scleropages_formosus
ENSCCAG00000005390	-	81	90.625	ENSSFOG00015022253	-	81	90.625	Scleropages_formosus
ENSCCAG00000005390	-	81	90.625	ENSSMAG00000008765	snrpd1	81	90.625	Scophthalmus_maximus
ENSCCAG00000005390	-	77	90.217	ENSSDUG00000010521	snrpd1	78	90.217	Seriola_dumerili
ENSCCAG00000005390	-	81	91.667	ENSSLDG00000011858	snrpd1	81	91.667	Seriola_lalandi_dorsalis
ENSCCAG00000005390	-	56	94.030	ENSSARG00000004271	SNRPD1	100	94.030	Sorex_araneus
ENSCCAG00000005390	-	81	95.833	ENSSPUG00000002824	SNRPD1	81	95.833	Sphenodon_punctatus
ENSCCAG00000005390	-	75	92.135	ENSSPAG00000015229	snrpd1	79	92.135	Stegastes_partitus
ENSCCAG00000005390	-	94	96.429	ENSSSCG00000003701	SNRPD1	100	96.429	Sus_scrofa
ENSCCAG00000005390	-	77	95.652	ENSTGUG00000005095	SNRPD1	77	95.652	Taeniopygia_guttata
ENSCCAG00000005390	-	75	92.135	ENSTRUG00000008977	snrpd1	79	92.135	Takifugu_rubripes
ENSCCAG00000005390	-	67	86.250	ENSTNIG00000001224	snrpd1	77	86.250	Tetraodon_nigroviridis
ENSCCAG00000005390	-	74	96.591	ENSTBEG00000013776	SNRPD1	100	96.591	Tupaia_belangeri
ENSCCAG00000005390	-	77	95.652	ENSTTRG00000002654	SNRPD1	80	95.652	Tursiops_truncatus
ENSCCAG00000005390	-	96	95.614	ENSUAMG00000013431	SNRPD1	97	95.614	Ursus_americanus
ENSCCAG00000005390	-	81	95.833	ENSUMAG00000019740	SNRPD1	81	95.833	Ursus_maritimus
ENSCCAG00000005390	-	81	95.833	ENSVPAG00000010056	SNRPD1	64	95.833	Vicugna_pacos
ENSCCAG00000005390	-	94	96.429	ENSVVUG00000004009	SNRPD1	100	96.429	Vulpes_vulpes
ENSCCAG00000005390	-	81	93.750	ENSXETG00000027354	snrpd1	81	93.750	Xenopus_tropicalis
ENSCCAG00000005390	-	81	91.667	ENSXCOG00000020108	snrpd1	81	91.667	Xiphophorus_couchianus
ENSCCAG00000005390	-	81	91.667	ENSXMAG00000003368	snrpd1	81	91.667	Xiphophorus_maculatus