EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000007393 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 165 bases
Position: chrKV389514.1:1927058-1927222
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000001112	LSM	PF01423.22	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000007767	-	165	-	ENSCCAP00000001112	54 (aa)	-	A0A2K5PBV4

Gene Model

Click here to download ENSCCAG00000007393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000007393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000007393	-	100	92.593	ENSCCAG00000007464	-	100	92.593
ENSCCAG00000007393	-	100	94.444	ENSCCAG00000030191	-	52	94.444
ENSCCAG00000007393	-	100	92.593	ENSCCAG00000018327	-	100	92.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000007393	-	100	96.296	ENSG00000125743	SNRPD2	100	96.296	Homo_sapiens
ENSCCAG00000007393	-	100	94.444	ENSACIG00000022689	snrpd2	50	94.444	Amphilophus_citrinellus
ENSCCAG00000007393	-	100	92.593	ENSANAG00000005642	-	100	92.593	Aotus_nancymaae
ENSCCAG00000007393	-	100	96.296	ENSANAG00000019777	-	100	96.296	Aotus_nancymaae
ENSCCAG00000007393	-	98	94.340	ENSANAG00000031633	-	98	94.340	Aotus_nancymaae
ENSCCAG00000007393	-	100	92.593	ENSCJAG00000044478	-	100	92.593	Callithrix_jacchus
ENSCCAG00000007393	-	100	96.296	ENSCANG00000002575	-	100	96.296	Colobus_angolensis_palliatus
ENSCCAG00000007393	-	100	94.444	ENSLACG00000004720	SNRPD2	50	94.444	Latimeria_chalumnae
ENSCCAG00000007393	-	100	96.296	ENSMMUG00000006937	SNRPD2	100	96.296	Macaca_mulatta
ENSCCAG00000007393	-	100	96.296	ENSMNEG00000039787	-	51	96.296	Macaca_nemestrina
ENSCCAG00000007393	-	100	96.296	ENSMOCG00000006567	-	100	96.296	Microtus_ochrogaster
ENSCCAG00000007393	-	100	96.296	ENSNLEG00000002274	SNRPD2	50	96.296	Nomascus_leucogenys
ENSCCAG00000007393	-	100	94.444	ENSOMEG00000012661	snrpd2	50	94.444	Oryzias_melastigma
ENSCCAG00000007393	-	100	96.296	ENSPTIG00000006666	-	50	96.296	Panthera_tigris_altaica
ENSCCAG00000007393	-	100	96.296	ENSPSIG00000015823	-	50	96.296	Pelodiscus_sinensis
ENSCCAG00000007393	-	100	94.444	ENSSFOG00015022535	snrpd2	50	94.444	Scleropages_formosus
ENSCCAG00000007393	-	100	96.296	ENSSPUG00000003011	-	100	96.296	Sphenodon_punctatus