EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCCAG00000007744 (Gene tree)
Gene ID
108291296
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Cebus_capucinus
Status
putative
Strand
Minus strand
Length
13499 bases
Position
chrKV389875.1:2525739-2539237
Accession
108291296
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCCAP00000001623RRM_1PF00076.222.5e-4312
ENSCCAP00000001623RRM_1PF00076.222.5e-4322
ENSCCAP00000001569RRM_1PF00076.222.7e-4312
ENSCCAP00000001569RRM_1PF00076.222.7e-4322
ENSCCAP00000001621RRM_1PF00076.222.8e-4312
ENSCCAP00000001621RRM_1PF00076.222.8e-4322
ENSCCAP00000001576RRM_1PF00076.222.9e-4312
ENSCCAP00000001576RRM_1PF00076.222.9e-4322
ENSCCAP00000001564RRM_1PF00076.223.1e-4312
ENSCCAP00000001564RRM_1PF00076.223.1e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCCAT00000010742PUF60-2012547XM_017511570ENSCCAP00000001564563 (aa)XP_017367059A0A2K5PD71
ENSCCAT00000010860PUF60-2031843XM_017511574ENSCCAP00000001576530 (aa)XP_017367063A0A2K5PD67
ENSCCAT00000011125PUF60-2041578-ENSCCAP00000001621525 (aa)-A0A2K5PDB4
ENSCCAT00000011131PUF60-2051674-ENSCCAP00000001623557 (aa)-A0A2K5PDB8
ENSCCAT00000010780PUF60-2022495XM_017511572ENSCCAP00000001569546 (aa)XP_017367061A0A2K5PD76
Gene Model
Click here to download ENSCCAG00000007744's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000007744's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCCAG00000007744PUF605135.294ENSCCAG00000023336U2AF26037.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCCAG00000007744PUF6010099.623ENSG00000179950PUF6010099.623Homo_sapiens
ENSCCAG00000007744PUF609885.579ENSAPOG00000001713puf60b9985.606Acanthochromis_polyacanthus
ENSCCAG00000007744PUF609997.273ENSAMEG00000006406PUF609997.273Ailuropoda_melanoleuca
ENSCCAG00000007744PUF609785.605ENSACIG00000021705puf60b10085.605Amphilophus_citrinellus
ENSCCAG00000007744PUF609776.820ENSACIG00000003263-9977.203Amphilophus_citrinellus
ENSCCAG00000007744PUF609885.579ENSAOCG00000005395puf60b10086.372Amphiprion_ocellaris
ENSCCAG00000007744PUF6010080.712ENSAOCG00000015558-10081.273Amphiprion_ocellaris
ENSCCAG00000007744PUF609772.553ENSAPEG00000001836-9976.078Amphiprion_percula
ENSCCAG00000007744PUF609880.076ENSAPEG00000011923puf60b9982.779Amphiprion_percula
ENSCCAG00000007744PUF609980.566ENSATEG00000006303-9981.524Anabas_testudineus
ENSCCAG00000007744PUF609885.389ENSATEG00000001730puf60b9985.417Anabas_testudineus
ENSCCAG00000007744PUF609898.084ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSCCAG00000007744PUF609996.578ENSACAG00000001645PUF609896.402Anolis_carolinensis
ENSCCAG00000007744PUF6010099.645ENSANAG00000018626PUF6010099.645Aotus_nancymaae
ENSCCAG00000007744PUF609785.605ENSACLG00000004462puf60b10085.605Astatotilapia_calliptera
ENSCCAG00000007744PUF609776.636ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSCCAG00000007744PUF609884.486ENSAMXG00000036570puf60a9784.736Astyanax_mexicanus
ENSCCAG00000007744PUF6010099.245ENSBTAG00000037493PUF6010099.245Bos_taurus
ENSCCAG00000007744PUF608050.162WBGene00004389rnp-68948.297Caenorhabditis_elegans
ENSCCAG00000007744PUF6010099.811ENSCJAG00000021485PUF6010099.811Callithrix_jacchus
ENSCCAG00000007744PUF6010099.084ENSCAFG00000001400PUF6010099.084Canis_familiaris
ENSCCAG00000007744PUF6010099.623ENSCAFG00020018754PUF6010099.623Canis_lupus_dingo
ENSCCAG00000007744PUF609998.378ENSCHIG00000001618PUF609298.378Capra_hircus
ENSCCAG00000007744PUF6010099.434ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSCCAG00000007744PUF609993.226ENSCPOG00000014613PUF609992.692Cavia_porcellus
ENSCCAG00000007744PUF6010099.623ENSCATG00000035405PUF6010099.623Cercocebus_atys
ENSCCAG00000007744PUF6010099.291ENSCLAG00000009154PUF6010099.291Chinchilla_lanigera
ENSCCAG00000007744PUF609799.612ENSCSAG00000008878PUF6010099.612Chlorocebus_sabaeus
ENSCCAG00000007744PUF609997.727ENSCPBG00000005595PUF609997.727Chrysemys_picta_bellii
ENSCCAG00000007744PUF606259.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSCCAG00000007744PUF6010048.094ENSCING00000008436-10048.155Ciona_intestinalis
ENSCCAG00000007744PUF609555.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSCCAG00000007744PUF609550.200ENSCSAVG00000004765-9750.617Ciona_savignyi
ENSCCAG00000007744PUF608098.633ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSCCAG00000007744PUF6010098.582ENSCGRG00001017442Puf6010098.582Cricetulus_griseus_chok1gshd
ENSCCAG00000007744PUF609997.662ENSCGRG00000003717Puf609997.662Cricetulus_griseus_crigri
ENSCCAG00000007744PUF609884.820ENSCSEG00000019887puf60b9385.009Cynoglossus_semilaevis
ENSCCAG00000007744PUF609971.269ENSCSEG00000014845-9673.432Cynoglossus_semilaevis
ENSCCAG00000007744PUF608980.000ENSCVAG00000001560-9879.325Cyprinodon_variegatus
ENSCCAG00000007744PUF609784.837ENSCVAG00000009386puf60b10085.988Cyprinodon_variegatus
ENSCCAG00000007744PUF609778.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSCCAG00000007744PUF609787.335ENSDARG00000032175puf60a9994.043Danio_rerio
ENSCCAG00000007744PUF609981.038ENSDNOG00000043278PUF609881.038Dasypus_novemcinctus
ENSCCAG00000007744PUF609998.559ENSDORG00000004585Puf6010098.559Dipodomys_ordii
ENSCCAG00000007744PUF609549.141FBgn0028577hfp9947.426Drosophila_melanogaster
ENSCCAG00000007744PUF609860.708ENSEBUG00000014291puf60b8565.565Eptatretus_burgeri
ENSCCAG00000007744PUF609570.040ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSCCAG00000007744PUF6010099.623ENSEASG00005009695PUF6010099.623Equus_asinus_asinus
ENSCCAG00000007744PUF609999.279ENSECAG00000024681PUF609999.279Equus_caballus
ENSCCAG00000007744PUF6010082.210ENSELUG00000006507puf60b10079.464Esox_lucius
ENSCCAG00000007744PUF6010084.572ENSELUG00000018443-9985.404Esox_lucius
ENSCCAG00000007744PUF6010099.245ENSFCAG00000001045PUF6010099.245Felis_catus
ENSCCAG00000007744PUF609985.496ENSFALG00000001136PUF609986.667Ficedula_albicollis
ENSCCAG00000007744PUF6010098.936ENSFDAG00000017177PUF6010098.936Fukomys_damarensis
ENSCCAG00000007744PUF609379.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSCCAG00000007744PUF6010083.551ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSCCAG00000007744PUF609871.429ENSGMOG00000006392puf60b10070.865Gadus_morhua
ENSCCAG00000007744PUF606598.256ENSGALG00000039901PUF609498.256Gallus_gallus
ENSCCAG00000007744PUF609779.344ENSGAFG00000004334-9978.980Gambusia_affinis
ENSCCAG00000007744PUF6010082.804ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSCCAG00000007744PUF609969.115ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSCCAG00000007744PUF6010073.371ENSGACG00000004717puf60b10072.897Gasterosteus_aculeatus
ENSCCAG00000007744PUF609997.727ENSGAGG00000013289PUF609397.727Gopherus_agassizii
ENSCCAG00000007744PUF6010099.623ENSGGOG00000004646PUF6010099.623Gorilla_gorilla
ENSCCAG00000007744PUF609884.820ENSHBUG00000015118puf60b10085.605Haplochromis_burtoni
ENSCCAG00000007744PUF609981.015ENSHBUG00000009634-10082.143Haplochromis_burtoni
ENSCCAG00000007744PUF6010098.936ENSHGLG00000006111PUF6010098.936Heterocephalus_glaber_female
ENSCCAG00000007744PUF6010098.936ENSHGLG00100012362PUF6010098.936Heterocephalus_glaber_male
ENSCCAG00000007744PUF609882.136ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSCCAG00000007744PUF609666.667ENSHCOG00000000378-9964.850Hippocampus_comes
ENSCCAG00000007744PUF609782.609ENSIPUG00000002453puf60a9982.609Ictalurus_punctatus
ENSCCAG00000007744PUF609778.318ENSIPUG00000004660puf60b9978.571Ictalurus_punctatus
ENSCCAG00000007744PUF6010098.579ENSSTOG00000025037PUF6010098.579Ictidomys_tridecemlineatus
ENSCCAG00000007744PUF6010098.757ENSJJAG00000001076Puf6010098.757Jaculus_jaculus
ENSCCAG00000007744PUF609785.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSCCAG00000007744PUF609778.261ENSKMAG00000010106-10077.247Kryptolebias_marmoratus
ENSCCAG00000007744PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSCCAG00000007744PUF606890.634ENSLACG00000005456PUF6010090.164Latimeria_chalumnae
ENSCCAG00000007744PUF6010089.869ENSLOCG00000010106puf60b10089.869Lepisosteus_oculatus
ENSCCAG00000007744PUF609897.893ENSLAFG00000022929PUF6010095.374Loxodonta_africana
ENSCCAG00000007744PUF6010099.623ENSMFAG00000043373PUF6010099.623Macaca_fascicularis
ENSCCAG00000007744PUF6010099.623ENSMMUG00000013558PUF6010099.623Macaca_mulatta
ENSCCAG00000007744PUF6010099.623ENSMNEG00000031099PUF6010099.623Macaca_nemestrina
ENSCCAG00000007744PUF609799.612ENSMLEG00000040009PUF6010099.612Mandrillus_leucophaeus
ENSCCAG00000007744PUF609885.199ENSMAMG00000010394puf60b10083.738Mastacembelus_armatus
ENSCCAG00000007744PUF609981.579ENSMAMG00000019476-9981.391Mastacembelus_armatus
ENSCCAG00000007744PUF609785.605ENSMZEG00005018515puf60b10085.605Maylandia_zebra
ENSCCAG00000007744PUF609981.203ENSMZEG00005019425-9980.414Maylandia_zebra
ENSCCAG00000007744PUF609997.714ENSMGAG00000013070PUF609997.714Meleagris_gallopavo
ENSCCAG00000007744PUF6010076.449ENSMAUG00000018549-10076.449Mesocricetus_auratus
ENSCCAG00000007744PUF607298.775ENSMAUG00000014267-10098.775Mesocricetus_auratus
ENSCCAG00000007744PUF6010099.623ENSMICG00000012226PUF6010099.623Microcebus_murinus
ENSCCAG00000007744PUF6010098.759ENSMOCG00000018780Puf6010098.759Microtus_ochrogaster
ENSCCAG00000007744PUF609785.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSCCAG00000007744PUF609872.467ENSMMOG00000018059-9976.256Mola_mola
ENSCCAG00000007744PUF6010096.886ENSMODG00000009161PUF6010096.886Monodelphis_domestica
ENSCCAG00000007744PUF609979.699ENSMALG00000000200-9979.661Monopterus_albus
ENSCCAG00000007744PUF609878.887ENSMALG00000006797puf60b9978.927Monopterus_albus
ENSCCAG00000007744PUF6010098.582MGP_CAROLIEiJ_G0019910Puf6010098.582Mus_caroli
ENSCCAG00000007744PUF6010098.582ENSMUSG00000002524Puf6010098.582Mus_musculus
ENSCCAG00000007744PUF6010098.582MGP_PahariEiJ_G0019920Puf6010098.582Mus_pahari
ENSCCAG00000007744PUF6010098.582MGP_SPRETEiJ_G0020812Puf6010098.582Mus_spretus
ENSCCAG00000007744PUF609899.234ENSMPUG00000008137PUF609798.198Mustela_putorius_furo
ENSCCAG00000007744PUF6010091.509ENSMLUG00000013032-9895.050Myotis_lucifugus
ENSCCAG00000007744PUF609997.658ENSMLUG00000000238-9897.658Myotis_lucifugus
ENSCCAG00000007744PUF6010098.936ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSCCAG00000007744PUF609981.391ENSNBRG00000017223-9981.559Neolamprologus_brichardi
ENSCCAG00000007744PUF607984.471ENSNBRG00000013047puf60b9784.471Neolamprologus_brichardi
ENSCCAG00000007744PUF6010098.934ENSNLEG00000002156PUF6010098.934Nomascus_leucogenys
ENSCCAG00000007744PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSCCAG00000007744PUF609573.767ENSODEG00000015513-9971.483Octodon_degus
ENSCCAG00000007744PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSCCAG00000007744PUF609981.579ENSONIG00000014030-9981.629Oreochromis_niloticus
ENSCCAG00000007744PUF609884.820ENSONIG00000006247puf60b9984.848Oreochromis_niloticus
ENSCCAG00000007744PUF609679.487ENSOANG00000006962PUF609979.290Ornithorhynchus_anatinus
ENSCCAG00000007744PUF609884.820ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSCCAG00000007744PUF609778.598ENSORLG00000028655-9978.137Oryzias_latipes
ENSCCAG00000007744PUF609977.944ENSORLG00020018144-9878.030Oryzias_latipes_hni
ENSCCAG00000007744PUF609884.820ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSCCAG00000007744PUF609978.067ENSORLG00015016833-9878.286Oryzias_latipes_hsok
ENSCCAG00000007744PUF609883.932ENSORLG00015007718puf60b10084.512Oryzias_latipes_hsok
ENSCCAG00000007744PUF609882.528ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSCCAG00000007744PUF609978.947ENSOMEG00000022185-9978.947Oryzias_melastigma
ENSCCAG00000007744PUF609899.425ENSOGAG00000006259PUF609997.687Otolemur_garnettii
ENSCCAG00000007744PUF609896.743ENSOARG00000016235PUF609996.750Ovis_aries
ENSCCAG00000007744PUF6010099.623ENSPPAG00000029933PUF6010099.623Pan_paniscus
ENSCCAG00000007744PUF6010099.245ENSPPRG00000003257PUF6010099.245Panthera_pardus
ENSCCAG00000007744PUF609997.959ENSPTIG00000009795PUF609996.935Panthera_tigris_altaica
ENSCCAG00000007744PUF6010099.434ENSPTRG00000020670PUF6010099.434Pan_troglodytes
ENSCCAG00000007744PUF609999.051ENSPTRG00000043963-9999.051Pan_troglodytes
ENSCCAG00000007744PUF6010099.623ENSPANG00000021936PUF6010099.623Papio_anubis
ENSCCAG00000007744PUF6010085.475ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSCCAG00000007744PUF6010086.704ENSPKIG00000012204puf60b10088.654Paramormyrops_kingsleyae
ENSCCAG00000007744PUF609897.893ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSCCAG00000007744PUF609784.542ENSPMGG00000013444puf60b9984.542Periophthalmus_magnuspinnatus
ENSCCAG00000007744PUF6010098.759ENSPEMG00000008820Puf6010098.759Peromyscus_maniculatus_bairdii
ENSCCAG00000007744PUF609999.044ENSPCIG00000020270PUF609999.232Phascolarctos_cinereus
ENSCCAG00000007744PUF6010083.551ENSPFOG00000019217puf60b10084.825Poecilia_formosa
ENSCCAG00000007744PUF609979.434ENSPFOG00000011118-9979.773Poecilia_formosa
ENSCCAG00000007744PUF609979.434ENSPLAG00000017025-9279.395Poecilia_latipinna
ENSCCAG00000007744PUF609785.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSCCAG00000007744PUF6010083.551ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSCCAG00000007744PUF609979.434ENSPMEG00000009767-9279.773Poecilia_mexicana
ENSCCAG00000007744PUF6010080.874ENSPREG00000005440puf60b10083.929Poecilia_reticulata
ENSCCAG00000007744PUF607997.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSCCAG00000007744PUF607999.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSCCAG00000007744PUF6010099.434ENSPCOG00000027981PUF6010099.434Propithecus_coquereli
ENSCCAG00000007744PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSCCAG00000007744PUF609981.203ENSPNYG00000004273-9980.414Pundamilia_nyererei
ENSCCAG00000007744PUF609785.605ENSPNYG00000002556puf60b10085.605Pundamilia_nyererei
ENSCCAG00000007744PUF609982.453ENSPNAG00000019909puf60a9984.766Pygocentrus_nattereri
ENSCCAG00000007744PUF609877.481ENSPNAG00000019415puf60b9676.623Pygocentrus_nattereri
ENSCCAG00000007744PUF6010098.537ENSRNOG00000009960Puf6010098.537Rattus_norvegicus
ENSCCAG00000007744PUF6010099.623ENSRBIG00000035274PUF6010099.623Rhinopithecus_bieti
ENSCCAG00000007744PUF6010099.623ENSRROG00000029360PUF6010099.623Rhinopithecus_roxellana
ENSCCAG00000007744PUF6010098.667ENSSBOG00000027089PUF6010098.667Saimiri_boliviensis_boliviensis
ENSCCAG00000007744PUF608998.723ENSSHAG00000006668PUF609696.086Sarcophilus_harrisii
ENSCCAG00000007744PUF609386.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSCCAG00000007744PUF6010080.893ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSCCAG00000007744PUF607491.349ENSSMAG00000016381puf60b7689.865Scophthalmus_maximus
ENSCCAG00000007744PUF609983.488ENSSDUG00000009935puf60b10083.488Seriola_dumerili
ENSCCAG00000007744PUF609979.395ENSSDUG00000007048-9979.773Seriola_dumerili
ENSCCAG00000007744PUF609885.551ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSCCAG00000007744PUF609780.455ENSSLDG00000007366-9980.682Seriola_lalandi_dorsalis
ENSCCAG00000007744PUF606585.260ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSCCAG00000007744PUF609781.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSCCAG00000007744PUF609882.810ENSSPAG00000012144puf60b10084.112Stegastes_partitus
ENSCCAG00000007744PUF609898.851ENSSSCG00000038800PUF609898.812Sus_scrofa
ENSCCAG00000007744PUF609894.828ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSCCAG00000007744PUF609777.907ENSTRUG00000008843-10079.563Takifugu_rubripes
ENSCCAG00000007744PUF609884.250ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSCCAG00000007744PUF609877.778ENSTNIG00000003069-10077.083Tetraodon_nigroviridis
ENSCCAG00000007744PUF609884.250ENSTNIG00000013675puf60b10084.280Tetraodon_nigroviridis
ENSCCAG00000007744PUF607980.925ENSTBEG00000001899-10081.214Tupaia_belangeri
ENSCCAG00000007744PUF606095.946ENSTBEG00000002751-9995.932Tupaia_belangeri
ENSCCAG00000007744PUF609798.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSCCAG00000007744PUF6010099.623ENSUAMG00000024917PUF6010099.623Ursus_americanus
ENSCCAG00000007744PUF609894.828ENSUMAG00000000272PUF6010092.857Ursus_maritimus
ENSCCAG00000007744PUF609998.741ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSCCAG00000007744PUF609993.182ENSXETG00000012469puf609994.246Xenopus_tropicalis
ENSCCAG00000007744PUF609781.766ENSXCOG00000012355puf60b10085.714Xiphophorus_couchianus
ENSCCAG00000007744PUF609778.378ENSXMAG00000010507-9980.118Xiphophorus_maculatus
ENSCCAG00000007744PUF6010083.551ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus

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