EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000008378 (Gene tree)
Gene ID: 108316776
Gene Symbol: -
Alias: -
Full Name: U7 snRNA-associated Sm-like protein LSm10
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrKV389618.1:2336566-2336937
Accession: 108316776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000001265	LSM	PF01423.22	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000008826	-	372	XM_017546883	ENSCCAP00000001265	123 (aa)	XP_017402372	A0A2K5PCA1

Gene Model

Click here to download ENSCCAG00000008378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000008378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000008378	-	99	96.721	ENSCCAG00000018913	-	99	96.721
ENSCCAG00000008378	-	55	30.000	ENSCCAG00000024276	LSM2	74	30.000
ENSCCAG00000008378	-	56	30.000	ENSCCAG00000036308	LSM4	50	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000008378	-	99	94.262	ENSG00000181817	LSM10	99	94.262	Homo_sapiens
ENSCCAG00000008378	-	98	90.000	ENSAMEG00000019854	LSM10	98	90.000	Ailuropoda_melanoleuca
ENSCCAG00000008378	-	95	64.103	ENSACIG00000015420	oscp1a	77	64.103	Amphilophus_citrinellus
ENSCCAG00000008378	-	96	65.254	ENSAOCG00000015618	LSM10	98	65.254	Amphiprion_ocellaris
ENSCCAG00000008378	-	96	65.254	ENSAOCG00000014654	-	98	65.254	Amphiprion_ocellaris
ENSCCAG00000008378	-	90	63.964	ENSAOCG00000015607	LSM10	86	63.964	Amphiprion_ocellaris
ENSCCAG00000008378	-	96	65.254	ENSAPEG00000021845	-	98	65.254	Amphiprion_percula
ENSCCAG00000008378	-	90	63.964	ENSAPEG00000021851	LSM10	86	63.964	Amphiprion_percula
ENSCCAG00000008378	-	94	59.483	ENSATEG00000006310	oscp1a	86	59.483	Anabas_testudineus
ENSCCAG00000008378	-	95	66.667	ENSACAG00000001231	LSM10	95	66.667	Anolis_carolinensis
ENSCCAG00000008378	-	99	95.902	ENSANAG00000031489	-	100	95.902	Aotus_nancymaae
ENSCCAG00000008378	-	99	96.721	ENSANAG00000018759	-	99	96.721	Aotus_nancymaae
ENSCCAG00000008378	-	96	63.559	ENSACLG00000004728	oscp1a	96	63.559	Astatotilapia_calliptera
ENSCCAG00000008378	-	97	63.025	ENSAMXG00000025301	oscp1a	98	63.025	Astyanax_mexicanus
ENSCCAG00000008378	-	99	90.164	ENSBTAG00000024096	LSM10	100	90.164	Bos_taurus
ENSCCAG00000008378	-	99	95.902	ENSCJAG00000044880	LSM10	99	95.902	Callithrix_jacchus
ENSCCAG00000008378	-	98	91.667	ENSCAFG00000003382	LSM10	98	91.667	Canis_familiaris
ENSCCAG00000008378	-	98	91.667	ENSCAFG00020008920	LSM10	98	91.667	Canis_lupus_dingo
ENSCCAG00000008378	-	99	90.164	ENSCHIG00000009398	LSM10	100	90.164	Capra_hircus
ENSCCAG00000008378	-	98	90.833	ENSCAPG00000012567	LSM10	98	90.833	Cavia_aperea
ENSCCAG00000008378	-	98	90.833	ENSCPOG00000039302	LSM10	98	90.833	Cavia_porcellus
ENSCCAG00000008378	-	98	95.041	ENSCATG00000006589	LSM10	98	95.041	Cercocebus_atys
ENSCCAG00000008378	-	98	92.500	ENSCLAG00000008633	LSM10	98	92.500	Chinchilla_lanigera
ENSCCAG00000008378	-	98	95.041	ENSCSAG00000000134	LSM10	98	95.041	Chlorocebus_sabaeus
ENSCCAG00000008378	-	99	91.129	ENSCHOG00000008615	LSM10	99	91.129	Choloepus_hoffmanni
ENSCCAG00000008378	-	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSCCAG00000008378	-	98	95.041	ENSCANG00000019928	LSM10	98	95.041	Colobus_angolensis_palliatus
ENSCCAG00000008378	-	93	80.172	ENSCGRG00001022673	-	93	80.172	Cricetulus_griseus_chok1gshd
ENSCCAG00000008378	-	98	90.000	ENSCGRG00001004317	-	98	90.000	Cricetulus_griseus_chok1gshd
ENSCCAG00000008378	-	93	80.172	ENSCGRG00000015514	-	93	80.172	Cricetulus_griseus_crigri
ENSCCAG00000008378	-	98	90.000	ENSCGRG00000014935	-	98	90.000	Cricetulus_griseus_crigri
ENSCCAG00000008378	-	98	60.000	ENSCSEG00000010374	oscp1a	81	59.504	Cynoglossus_semilaevis
ENSCCAG00000008378	-	98	63.333	ENSCVAG00000001536	oscp1a	91	63.333	Cyprinodon_variegatus
ENSCCAG00000008378	-	98	68.333	ENSDARG00000101222	oscp1a	99	68.333	Danio_rerio
ENSCCAG00000008378	-	69	69.412	ENSDARG00000109563	CABZ01074453.1	99	69.412	Danio_rerio
ENSCCAG00000008378	-	98	94.215	ENSDNOG00000036662	LSM10	98	94.215	Dasypus_novemcinctus
ENSCCAG00000008378	-	98	90.833	ENSDORG00000007579	Lsm10	98	90.833	Dipodomys_ordii
ENSCCAG00000008378	-	85	30.275	FBgn0033554	Lsm10	77	30.275	Drosophila_melanogaster
ENSCCAG00000008378	-	98	87.500	ENSETEG00000005703	LSM10	98	87.500	Echinops_telfairi
ENSCCAG00000008378	-	83	54.902	ENSEBUG00000001312	oscp1a	84	54.902	Eptatretus_burgeri
ENSCCAG00000008378	-	98	91.667	ENSEASG00005012194	LSM10	98	91.667	Equus_asinus_asinus
ENSCCAG00000008378	-	98	92.500	ENSECAG00000005071	LSM10	98	92.500	Equus_caballus
ENSCCAG00000008378	-	98	90.000	ENSEEUG00000012032	LSM10	98	90.000	Erinaceus_europaeus
ENSCCAG00000008378	-	99	64.754	ENSELUG00000007452	oscp1a	100	64.754	Esox_lucius
ENSCCAG00000008378	-	95	70.085	ENSFALG00000000851	LSM10	95	70.085	Ficedula_albicollis
ENSCCAG00000008378	-	98	89.167	ENSFDAG00000021056	LSM10	98	89.167	Fukomys_damarensis
ENSCCAG00000008378	-	89	63.636	ENSFHEG00000001058	oscp1a	95	63.636	Fundulus_heteroclitus
ENSCCAG00000008378	-	87	63.551	ENSGMOG00000019832	oscp1a	90	63.551	Gadus_morhua
ENSCCAG00000008378	-	96	72.881	ENSGALG00000002127	LSM10	96	72.881	Gallus_gallus
ENSCCAG00000008378	-	95	55.833	ENSGAFG00000016445	oscp1a	97	55.833	Gambusia_affinis
ENSCCAG00000008378	-	96	60.169	ENSGACG00000002329	oscp1a	97	60.169	Gasterosteus_aculeatus
ENSCCAG00000008378	-	97	72.269	ENSGAGG00000024848	LSM10	97	72.269	Gopherus_agassizii
ENSCCAG00000008378	-	99	95.082	ENSGGOG00000003556	LSM10	99	95.082	Gorilla_gorilla
ENSCCAG00000008378	-	96	63.559	ENSHBUG00000001722	oscp1a	96	63.559	Haplochromis_burtoni
ENSCCAG00000008378	-	98	91.667	ENSHGLG00000011625	LSM10	98	91.667	Heterocephalus_glaber_female
ENSCCAG00000008378	-	98	91.667	ENSHGLG00100001769	LSM10	98	91.667	Heterocephalus_glaber_male
ENSCCAG00000008378	-	85	66.667	ENSIPUG00000005808	oscp1a	91	66.667	Ictalurus_punctatus
ENSCCAG00000008378	-	98	90.833	ENSSTOG00000000606	LSM10	98	90.833	Ictidomys_tridecemlineatus
ENSCCAG00000008378	-	96	61.017	ENSKMAG00000012143	oscp1a	98	61.017	Kryptolebias_marmoratus
ENSCCAG00000008378	-	98	60.000	ENSLBEG00000017764	oscp1a	98	60.000	Labrus_bergylta
ENSCCAG00000008378	-	97	73.109	ENSLACG00000015904	LSM10	92	73.109	Latimeria_chalumnae
ENSCCAG00000008378	-	98	69.167	ENSLOCG00000018277	oscp1a	98	69.167	Lepisosteus_oculatus
ENSCCAG00000008378	-	98	90.909	ENSLAFG00000009600	LSM10	98	90.909	Loxodonta_africana
ENSCCAG00000008378	-	98	95.041	ENSMFAG00000009115	LSM10	98	95.041	Macaca_fascicularis
ENSCCAG00000008378	-	98	95.041	ENSMMUG00000017338	LSM10	98	95.041	Macaca_mulatta
ENSCCAG00000008378	-	98	95.041	ENSMNEG00000020023	LSM10	98	95.041	Macaca_nemestrina
ENSCCAG00000008378	-	98	95.041	ENSMLEG00000025150	LSM10	98	95.041	Mandrillus_leucophaeus
ENSCCAG00000008378	-	99	62.295	ENSMAMG00000004427	oscp1a	100	62.295	Mastacembelus_armatus
ENSCCAG00000008378	-	96	63.559	ENSMZEG00005026307	oscp1a	96	63.559	Maylandia_zebra
ENSCCAG00000008378	-	96	71.186	ENSMGAG00000015707	LSM10	96	71.186	Meleagris_gallopavo
ENSCCAG00000008378	-	98	88.333	ENSMAUG00000016624	Lsm10	98	88.333	Mesocricetus_auratus
ENSCCAG00000008378	-	98	89.167	ENSMOCG00000021943	Lsm10	98	89.167	Microtus_ochrogaster
ENSCCAG00000008378	-	90	63.964	ENSMMOG00000013597	oscp1a	83	63.964	Mola_mola
ENSCCAG00000008378	-	98	80.165	ENSMODG00000023328	LSM10	98	80.165	Monodelphis_domestica
ENSCCAG00000008378	-	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSCCAG00000008378	-	98	89.167	MGP_CAROLIEiJ_G0026467	Lsm10	100	89.247	Mus_caroli
ENSCCAG00000008378	-	98	90.000	ENSMUSG00000050188	Lsm10	100	90.323	Mus_musculus
ENSCCAG00000008378	-	98	90.000	MGP_PahariEiJ_G0028798	Lsm10	100	90.323	Mus_pahari
ENSCCAG00000008378	-	98	90.000	MGP_SPRETEiJ_G0027446	Lsm10	100	90.323	Mus_spretus
ENSCCAG00000008378	-	98	91.667	ENSMPUG00000018593	LSM10	98	91.667	Mustela_putorius_furo
ENSCCAG00000008378	-	98	88.333	ENSMLUG00000023895	LSM10	98	88.333	Myotis_lucifugus
ENSCCAG00000008378	-	98	91.667	ENSNGAG00000015011	Lsm10	98	91.667	Nannospalax_galili
ENSCCAG00000008378	-	96	64.407	ENSNBRG00000014306	oscp1a	96	64.407	Neolamprologus_brichardi
ENSCCAG00000008378	-	99	94.262	ENSNLEG00000033754	LSM10	99	94.262	Nomascus_leucogenys
ENSCCAG00000008378	-	98	80.165	ENSMEUG00000006313	LSM10	98	80.165	Notamacropus_eugenii
ENSCCAG00000008378	-	98	89.167	ENSOPRG00000001699	LSM10	98	89.167	Ochotona_princeps
ENSCCAG00000008378	-	98	92.500	ENSODEG00000019161	LSM10	98	92.500	Octodon_degus
ENSCCAG00000008378	-	96	64.407	ENSONIG00000020904	oscp1a	97	64.407	Oreochromis_niloticus
ENSCCAG00000008378	-	99	72.951	ENSOANG00000002066	LSM10	99	72.951	Ornithorhynchus_anatinus
ENSCCAG00000008378	-	98	88.333	ENSOCUG00000005333	LSM10	98	88.333	Oryctolagus_cuniculus
ENSCCAG00000008378	-	98	61.667	ENSORLG00000009504	oscp1a	99	61.667	Oryzias_latipes
ENSCCAG00000008378	-	98	61.667	ENSORLG00020016201	oscp1a	99	61.667	Oryzias_latipes_hni
ENSCCAG00000008378	-	92	63.717	ENSORLG00015007794	oscp1a	95	63.717	Oryzias_latipes_hsok
ENSCCAG00000008378	-	98	90.000	ENSOGAG00000002653	LSM10	98	90.000	Otolemur_garnettii
ENSCCAG00000008378	-	99	90.164	ENSOARG00000009596	LSM10	100	90.164	Ovis_aries
ENSCCAG00000008378	-	99	94.262	ENSPPAG00000023465	LSM10	99	94.262	Pan_paniscus
ENSCCAG00000008378	-	98	92.500	ENSPPRG00000014619	LSM10	98	92.500	Panthera_pardus
ENSCCAG00000008378	-	98	92.500	ENSPTIG00000004613	LSM10	98	92.500	Panthera_tigris_altaica
ENSCCAG00000008378	-	99	94.262	ENSPTRG00000000539	LSM10	99	94.262	Pan_troglodytes
ENSCCAG00000008378	-	98	95.041	ENSPANG00000023172	LSM10	98	95.041	Papio_anubis
ENSCCAG00000008378	-	98	64.167	ENSPKIG00000003728	oscp1a	97	64.167	Paramormyrops_kingsleyae
ENSCCAG00000008378	-	97	70.588	ENSPSIG00000000590	LSM10	97	70.588	Pelodiscus_sinensis
ENSCCAG00000008378	-	62	63.158	ENSPMGG00000015718	oscp1a	99	63.158	Periophthalmus_magnuspinnatus
ENSCCAG00000008378	-	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSCCAG00000008378	-	91	63.393	ENSPFOG00000020490	oscp1a	95	63.393	Poecilia_formosa
ENSCCAG00000008378	-	91	63.393	ENSPLAG00000016537	oscp1a	85	63.393	Poecilia_latipinna
ENSCCAG00000008378	-	92	62.832	ENSPMEG00000000174	oscp1a	97	62.832	Poecilia_mexicana
ENSCCAG00000008378	-	95	61.538	ENSPREG00000009899	oscp1a	89	61.538	Poecilia_reticulata
ENSCCAG00000008378	-	99	95.082	ENSPPYG00000001539	LSM10	99	95.082	Pongo_abelii
ENSCCAG00000008378	-	99	89.344	ENSPCAG00000002520	LSM10	99	89.344	Procavia_capensis
ENSCCAG00000008378	-	98	90.000	ENSPVAG00000008644	LSM10	98	90.000	Pteropus_vampyrus
ENSCCAG00000008378	-	96	63.559	ENSPNYG00000003138	oscp1a	96	63.559	Pundamilia_nyererei
ENSCCAG00000008378	-	96	61.864	ENSPNAG00000028829	oscp1a	98	61.864	Pygocentrus_nattereri
ENSCCAG00000008378	-	98	90.833	ENSRNOG00000025716	Lsm10	98	90.833	Rattus_norvegicus
ENSCCAG00000008378	-	98	95.041	ENSRBIG00000001561	LSM10	98	95.041	Rhinopithecus_bieti
ENSCCAG00000008378	-	98	95.041	ENSRROG00000011414	LSM10	98	95.041	Rhinopithecus_roxellana
ENSCCAG00000008378	-	99	96.721	ENSSBOG00000036413	-	99	96.721	Saimiri_boliviensis_boliviensis
ENSCCAG00000008378	-	98	79.339	ENSSHAG00000018056	LSM10	98	79.339	Sarcophilus_harrisii
ENSCCAG00000008378	-	99	62.295	ENSSFOG00015019954	lsm10	100	62.295	Scleropages_formosus
ENSCCAG00000008378	-	93	62.609	ENSSMAG00000001297	oscp1a	98	62.609	Scophthalmus_maximus
ENSCCAG00000008378	-	99	61.789	ENSSDUG00000007090	oscp1a	100	61.789	Seriola_dumerili
ENSCCAG00000008378	-	96	62.712	ENSSLDG00000000800	oscp1a	98	62.712	Seriola_lalandi_dorsalis
ENSCCAG00000008378	-	98	87.705	ENSSARG00000004211	LSM10	98	90.164	Sorex_araneus
ENSCCAG00000008378	-	94	62.931	ENSSPAG00000009229	oscp1a	96	62.931	Stegastes_partitus
ENSCCAG00000008378	-	99	88.525	ENSSSCG00000038916	LSM10	99	88.525	Sus_scrofa
ENSCCAG00000008378	-	96	70.339	ENSTGUG00000001600	-	97	70.339	Taeniopygia_guttata
ENSCCAG00000008378	-	96	70.339	ENSTGUG00000001602	-	97	70.339	Taeniopygia_guttata
ENSCCAG00000008378	-	98	62.500	ENSTRUG00000010531	oscp1a	97	62.500	Takifugu_rubripes
ENSCCAG00000008378	-	99	92.623	ENSTBEG00000016674	LSM10	99	92.623	Tupaia_belangeri
ENSCCAG00000008378	-	98	90.000	ENSUAMG00000020265	LSM10	98	90.000	Ursus_americanus
ENSCCAG00000008378	-	98	89.256	ENSUMAG00000001438	LSM10	56	89.256	Ursus_maritimus
ENSCCAG00000008378	-	98	91.667	ENSVVUG00000023209	LSM10	98	91.667	Vulpes_vulpes
ENSCCAG00000008378	-	93	68.696	ENSXETG00000027631	lsm10	95	68.696	Xenopus_tropicalis
ENSCCAG00000008378	-	98	58.333	ENSXCOG00000018776	oscp1a	75	58.333	Xiphophorus_couchianus
ENSCCAG00000008378	-	92	61.062	ENSXMAG00000019963	oscp1a	90	61.062	Xiphophorus_maculatus