EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000008525 (Gene tree)
Gene ID: 108315303
Gene Symbol: APOBEC3H
Alias: ARP10
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 6212 bases
Position: chrKV389596.1:4362429-4368640
Accession: 108315303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000001344	APOBEC_N	PF08210.11	9.2e-36	1	1
ENSCCAP00000001319	APOBEC_N	PF08210.11	1.1e-35	1	1
ENSCCAP00000001358	APOBEC_N	PF08210.11	1.3e-28	1	1
ENSCCAP00000001344	APOBEC_C	PF05240.14	2.4e-25	1	1
ENSCCAP00000001319	APOBEC_C	PF05240.14	2.5e-25	1	1
ENSCCAP00000001358	APOBEC_C	PF05240.14	9.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000009357	APOBEC3H-203	474	-	ENSCCAP00000001358	157 (aa)	-	A0A2K5PCJ4
ENSCCAT00000009293	APOBEC3H-202	612	-	ENSCCAP00000001344	203 (aa)	-	A0A2K5PCJ2
ENSCCAT00000009205	APOBEC3H-201	976	XM_017544594	ENSCCAP00000001319	213 (aa)	XP_017400083	A0A2K5PCG8

Gene Model

Click here to download ENSCCAG00000008525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000008525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000008525	APOBEC3H	91	34.615	ENSCCAG00000032232	-	82	36.224
ENSCCAG00000008525	APOBEC3H	91	30.612	ENSCCAG00000030398	AICDA	71	33.628
ENSCCAG00000008525	APOBEC3H	91	31.333	ENSCCAG00000030932	-	71	35.185
ENSCCAG00000008525	APOBEC3H	90	30.688	ENSCCAG00000032509	-	79	31.579
ENSCCAG00000008525	APOBEC3H	91	36.943	ENSCCAG00000027450	-	89	37.374
ENSCCAG00000008525	APOBEC3H	92	36.478	ENSCCAG00000033147	-	88	38.579
ENSCCAG00000008525	APOBEC3H	89	37.755	ENSCCAG00000030928	-	91	37.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000008525	APOBEC3H	100	73.885	ENSG00000100298	APOBEC3H	100	74.522	Homo_sapiens
ENSCCAG00000008525	APOBEC3H	94	47.805	ENSAMEG00000010818	-	80	47.805	Ailuropoda_melanoleuca
ENSCCAG00000008525	APOBEC3H	94	87.562	ENSANAG00000025410	APOBEC3H	90	87.562	Aotus_nancymaae
ENSCCAG00000008525	APOBEC3H	92	50.273	ENSBTAG00000007755	APOBEC3H	93	50.273	Bos_taurus
ENSCCAG00000008525	APOBEC3H	100	83.744	ENSCJAG00000012524	APOBEC3H	100	83.744	Callithrix_jacchus
ENSCCAG00000008525	APOBEC3H	94	52.500	ENSCAFG00000001361	APOBEC3Z3	100	52.500	Canis_familiaris
ENSCCAG00000008525	APOBEC3H	97	51.020	ENSCAFG00020002584	-	97	51.020	Canis_lupus_dingo
ENSCCAG00000008525	APOBEC3H	90	49.727	ENSCHIG00000026580	-	92	49.727	Capra_hircus
ENSCCAG00000008525	APOBEC3H	89	54.676	ENSTSYG00000032894	-	100	52.486	Carlito_syrichta
ENSCCAG00000008525	APOBEC3H	96	50.980	ENSCPOG00000009257	-	90	50.251	Cavia_porcellus
ENSCCAG00000008525	APOBEC3H	100	73.885	ENSCATG00000030302	APOBEC3H	100	73.885	Cercocebus_atys
ENSCCAG00000008525	APOBEC3H	95	49.261	ENSCLAG00000016615	-	95	48.485	Chinchilla_lanigera
ENSCCAG00000008525	APOBEC3H	100	70.093	ENSCSAG00000006371	APOBEC3H	94	70.647	Chlorocebus_sabaeus
ENSCCAG00000008525	APOBEC3H	95	51.724	ENSCGRG00001022976	Apobec3	91	51.244	Cricetulus_griseus_chok1gshd
ENSCCAG00000008525	APOBEC3H	95	51.724	ENSCGRG00000005621	Apobec3	93	51.244	Cricetulus_griseus_crigri
ENSCCAG00000008525	APOBEC3H	92	50.811	ENSDORG00000027271	-	87	50.811	Dipodomys_ordii
ENSCCAG00000008525	APOBEC3H	93	51.244	ENSECAG00000007726	APOBEC3H	84	51.000	Equus_caballus
ENSCCAG00000008525	APOBEC3H	97	47.573	ENSFCAG00000005251	APOBEC3Z3	99	50.000	Felis_catus
ENSCCAG00000008525	APOBEC3H	90	53.191	ENSSTOG00000007125	-	85	51.366	Ictidomys_tridecemlineatus
ENSCCAG00000008525	APOBEC3H	88	47.482	ENSJJAG00000016840	-	74	47.482	Jaculus_jaculus
ENSCCAG00000008525	APOBEC3H	95	48.901	ENSLAFG00000027404	-	96	48.352	Loxodonta_africana
ENSCCAG00000008525	APOBEC3H	100	73.885	ENSMFAG00000031827	APOBEC3H	100	73.885	Macaca_fascicularis
ENSCCAG00000008525	APOBEC3H	100	73.885	ENSMMUG00000001016	APOBEC3H	100	73.885	Macaca_mulatta
ENSCCAG00000008525	APOBEC3H	100	73.885	ENSMNEG00000039259	APOBEC3H	100	73.885	Macaca_nemestrina
ENSCCAG00000008525	APOBEC3H	100	74.522	ENSMLEG00000033417	APOBEC3H	100	74.522	Mandrillus_leucophaeus
ENSCCAG00000008525	APOBEC3H	95	50.490	ENSMAUG00000011683	Apobec3	87	50.000	Mesocricetus_auratus
ENSCCAG00000008525	APOBEC3H	94	52.217	ENSMOCG00000021576	Apobec3	79	52.941	Microtus_ochrogaster
ENSCCAG00000008525	APOBEC3H	95	46.117	MGP_CAROLIEiJ_G0020029	Apobec3	89	44.554	Mus_caroli
ENSCCAG00000008525	APOBEC3H	95	47.317	ENSMUSG00000009585	Apobec3	99	44.554	Mus_musculus
ENSCCAG00000008525	APOBEC3H	99	48.128	MGP_PahariEiJ_G0020031	-	87	48.404	Mus_pahari
ENSCCAG00000008525	APOBEC3H	95	46.078	MGP_SPRETEiJ_G0020927	Apobec3	98	39.286	Mus_spretus
ENSCCAG00000008525	APOBEC3H	94	49.000	ENSMPUG00000013239	-	83	49.000	Mustela_putorius_furo
ENSCCAG00000008525	APOBEC3H	96	47.291	ENSNGAG00000018998	Apobec3	92	46.970	Nannospalax_galili
ENSCCAG00000008525	APOBEC3H	100	71.495	ENSNLEG00000015218	-	94	71.642	Nomascus_leucogenys
ENSCCAG00000008525	APOBEC3H	91	41.958	ENSOCUG00000023913	-	78	42.308	Oryctolagus_cuniculus
ENSCCAG00000008525	APOBEC3H	90	49.727	ENSOARG00000016290	APOBEC3F	93	49.198	Ovis_aries
ENSCCAG00000008525	APOBEC3H	100	75.796	ENSPPAG00000036522	APOBEC3H	100	76.433	Pan_paniscus
ENSCCAG00000008525	APOBEC3H	94	51.000	ENSPPRG00000003941	-	99	50.500	Panthera_pardus
ENSCCAG00000008525	APOBEC3H	89	34.932	ENSPPRG00000003675	-	82	35.802	Panthera_pardus
ENSCCAG00000008525	APOBEC3H	94	51.000	ENSPTIG00000010283	-	99	50.500	Panthera_tigris_altaica
ENSCCAG00000008525	APOBEC3H	100	75.796	ENSPTRG00000014390	APOBEC3H	100	76.433	Pan_troglodytes
ENSCCAG00000008525	APOBEC3H	99	74.839	ENSPANG00000010774	APOBEC3H	99	74.839	Papio_anubis
ENSCCAG00000008525	APOBEC3H	96	47.573	ENSPEMG00000000456	Apobec3	74	48.925	Peromyscus_maniculatus_bairdii
ENSCCAG00000008525	APOBEC3H	95	73.399	ENSPPYG00000011834	-	94	72.637	Pongo_abelii
ENSCCAG00000008525	APOBEC3H	90	41.758	ENSPCAG00000015655	-	99	41.304	Procavia_capensis
ENSCCAG00000008525	APOBEC3H	90	51.408	ENSPVAG00000009462	-	99	50.000	Pteropus_vampyrus
ENSCCAG00000008525	APOBEC3H	63	35.433	ENSPVAG00000024161	-	93	35.433	Pteropus_vampyrus
ENSCCAG00000008525	APOBEC3H	63	36.220	ENSPVAG00000024267	-	98	35.075	Pteropus_vampyrus
ENSCCAG00000008525	APOBEC3H	91	46.528	ENSRNOG00000016852	Apobec3	87	45.989	Rattus_norvegicus
ENSCCAG00000008525	APOBEC3H	100	72.611	ENSRBIG00000029088	APOBEC3H	100	72.611	Rhinopithecus_bieti
ENSCCAG00000008525	APOBEC3H	100	72.611	ENSRROG00000024699	APOBEC3H	100	72.611	Rhinopithecus_roxellana
ENSCCAG00000008525	APOBEC3H	91	85.870	ENSSBOG00000030005	APOBEC3H	100	84.783	Saimiri_boliviensis_boliviensis
ENSCCAG00000008525	APOBEC3H	98	48.252	ENSSSCG00000000091	APOBEC3B	85	46.535	Sus_scrofa
ENSCCAG00000008525	APOBEC3H	85	51.880	ENSTBEG00000001532	-	90	50.943	Tupaia_belangeri
ENSCCAG00000008525	APOBEC3H	89	51.079	ENSTTRG00000001266	-	99	49.727	Tursiops_truncatus
ENSCCAG00000008525	APOBEC3H	91	49.333	ENSUAMG00000004427	-	83	48.421	Ursus_americanus
ENSCCAG00000008525	APOBEC3H	94	50.500	ENSUMAG00000014435	-	99	50.500	Ursus_maritimus
ENSCCAG00000008525	APOBEC3H	64	55.725	ENSVPAG00000011108	-	98	55.725	Vicugna_pacos