EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCCAG00000010981 (Gene tree)
Gene ID
108313317
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Cebus_capucinus
Status
putative
Strand
Minus strand
Length
66694 bases
Position
chrKV389562.1:1216733-1283426
Accession
108313317
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCCAP00000001716tRNA_anti-codonPF01336.254.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCCAT00000011672RPA1-2012691XM_017541650ENSCCAP00000001716557 (aa)XP_017397139A0A2K5PDL0
Gene Model
Click here to download ENSCCAG00000010981's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000010981's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCCAG00000010981RPA19951.382ENSAPOG00000011658rpa19951.458Acanthochromis_polyacanthus
ENSCCAG00000010981RPA18951.282ENSAPOG00000019409RPA18051.282Acanthochromis_polyacanthus
ENSCCAG00000010981RPA19877.340ENSAMEG00000007706RPA19877.340Ailuropoda_melanoleuca
ENSCCAG00000010981RPA19549.155ENSACIG00000012881RPA19949.236Amphilophus_citrinellus
ENSCCAG00000010981RPA19551.754ENSACIG00000007277rpa19951.404Amphilophus_citrinellus
ENSCCAG00000010981RPA19952.026ENSAOCG00000023376rpa19951.546Amphiprion_ocellaris
ENSCCAG00000010981RPA19943.399ENSAOCG00000009003RPA110043.750Amphiprion_ocellaris
ENSCCAG00000010981RPA19952.026ENSAPEG00000008634rpa19951.546Amphiprion_percula
ENSCCAG00000010981RPA19945.427ENSAPEG00000019132RPA110042.962Amphiprion_percula
ENSCCAG00000010981RPA19946.177ENSATEG00000006443RPA110045.107Anabas_testudineus
ENSCCAG00000010981RPA19453.345ENSATEG00000022024rpa19953.002Anabas_testudineus
ENSCCAG00000010981RPA19768.868ENSAPLG00000012442RPA19268.868Anas_platyrhynchos
ENSCCAG00000010981RPA19954.574ENSACAG00000014490RPA19954.647Anolis_carolinensis
ENSCCAG00000010981RPA19886.424ENSANAG00000023456RPA110086.424Aotus_nancymaae
ENSCCAG00000010981RPA19949.060ENSACLG00000005223RPA19948.276Astatotilapia_calliptera
ENSCCAG00000010981RPA19352.422ENSACLG00000006640rpa19952.422Astatotilapia_calliptera
ENSCCAG00000010981RPA19952.265ENSAMXG00000008418rpa19952.019Astyanax_mexicanus
ENSCCAG00000010981RPA110081.034ENSBTAG00000009711RPA110081.034Bos_taurus
ENSCCAG00000010981RPA110086.710ENSCJAG00000001848RPA110086.710Callithrix_jacchus
ENSCCAG00000010981RPA110077.383ENSCAFG00000019249RPA110077.383Canis_familiaris
ENSCCAG00000010981RPA110077.383ENSCAFG00020009847RPA110077.383Canis_lupus_dingo
ENSCCAG00000010981RPA110079.092ENSCHIG00000026308RPA110079.254Capra_hircus
ENSCCAG00000010981RPA110080.097ENSTSYG00000003482-10080.097Carlito_syrichta
ENSCCAG00000010981RPA110078.029ENSCPOG00000000035RPA110078.029Cavia_porcellus
ENSCCAG00000010981RPA110078.843ENSCLAG00000015045-10078.843Chinchilla_lanigera
ENSCCAG00000010981RPA19978.606ENSCLAG00000005185-9978.606Chinchilla_lanigera
ENSCCAG00000010981RPA110093.178ENSCSAG00000013833RPA110093.178Chlorocebus_sabaeus
ENSCCAG00000010981RPA16876.923ENSCHOG00000009454-10076.923Choloepus_hoffmanni
ENSCCAG00000010981RPA19575.635ENSCHOG00000013540-10075.635Choloepus_hoffmanni
ENSCCAG00000010981RPA19963.209ENSCPBG00000020377RPA19962.561Chrysemys_picta_bellii
ENSCCAG00000010981RPA19934.578ENSCING00000023482-9834.534Ciona_intestinalis
ENSCCAG00000010981RPA19878.347ENSCANG00000030911RPA19978.347Colobus_angolensis_palliatus
ENSCCAG00000010981RPA19976.812ENSCGRG00001008197Rpa19975.845Cricetulus_griseus_chok1gshd
ENSCCAG00000010981RPA18073.725ENSCGRG00000000582Rpa19972.549Cricetulus_griseus_crigri
ENSCCAG00000010981RPA19949.592ENSCSEG00000013066rpa19949.429Cynoglossus_semilaevis
ENSCCAG00000010981RPA19942.097ENSCSEG00000012726RPA19941.582Cynoglossus_semilaevis
ENSCCAG00000010981RPA19952.941ENSCVAG00000019431rpa19953.147Cyprinodon_variegatus
ENSCCAG00000010981RPA19645.315ENSCVAG00000013446-9644.992Cyprinodon_variegatus
ENSCCAG00000010981RPA19953.821ENSDARG00000003938rpa19953.247Danio_rerio
ENSCCAG00000010981RPA19878.325ENSDNOG00000017218RPA19878.325Dasypus_novemcinctus
ENSCCAG00000010981RPA110078.998ENSDORG00000006199Rpa19979.254Dipodomys_ordii
ENSCCAG00000010981RPA19936.748FBgn0010173RpA-709836.585Drosophila_melanogaster
ENSCCAG00000010981RPA19183.816ENSETEG00000017608RPA18283.816Echinops_telfairi
ENSCCAG00000010981RPA19879.208ENSEASG00005009372RPA110077.653Equus_asinus_asinus
ENSCCAG00000010981RPA110079.645ENSECAG00000023886RPA110079.645Equus_caballus
ENSCCAG00000010981RPA16571.868ENSEEUG00000002186-6871.868Erinaceus_europaeus
ENSCCAG00000010981RPA19951.299ENSELUG00000021071rpa19951.053Esox_lucius
ENSCCAG00000010981RPA18748.168ENSELUG00000006136RPA19947.619Esox_lucius
ENSCCAG00000010981RPA110077.258ENSFCAG00000006306RPA19977.258Felis_catus
ENSCCAG00000010981RPA110061.736ENSFALG00000006575RPA19961.897Ficedula_albicollis
ENSCCAG00000010981RPA19978.444ENSFDAG00000007720RPA19978.444Fukomys_damarensis
ENSCCAG00000010981RPA19552.632ENSFHEG00000003580rpa19651.783Fundulus_heteroclitus
ENSCCAG00000010981RPA19948.534ENSGMOG00000010382rpa19948.534Gadus_morhua
ENSCCAG00000010981RPA110062.258ENSGALG00000003072RPA19962.258Gallus_gallus
ENSCCAG00000010981RPA19852.718ENSGAFG00000012916rpa19952.053Gambusia_affinis
ENSCCAG00000010981RPA19948.160ENSGAFG00000020953RPA19947.910Gambusia_affinis
ENSCCAG00000010981RPA19950.732ENSGACG00000010856rpa19950.000Gasterosteus_aculeatus
ENSCCAG00000010981RPA19963.209ENSGAGG00000013611RPA19962.561Gopherus_agassizii
ENSCCAG00000010981RPA110079.579ENSGGOG00000014186RPA110079.579Gorilla_gorilla
ENSCCAG00000010981RPA19646.998ENSHBUG00000009348RPA19946.564Haplochromis_burtoni
ENSCCAG00000010981RPA19952.683ENSHBUG00000017773rpa19952.188Haplochromis_burtoni
ENSCCAG00000010981RPA19978.768ENSHGLG00000008846RPA110078.768Heterocephalus_glaber_female
ENSCCAG00000010981RPA110074.716ENSHGLG00100000799-10074.716Heterocephalus_glaber_male
ENSCCAG00000010981RPA110066.721ENSHGLG00100002005-10066.721Heterocephalus_glaber_male
ENSCCAG00000010981RPA19978.768ENSHGLG00100017755-10078.768Heterocephalus_glaber_male
ENSCCAG00000010981RPA19938.312ENSHCOG00000000351RPA19938.149Hippocampus_comes
ENSCCAG00000010981RPA19951.608ENSHCOG00000001401rpa19952.195Hippocampus_comes
ENSCCAG00000010981RPA19952.581ENSIPUG00000004400rpa19952.026Ictalurus_punctatus
ENSCCAG00000010981RPA19771.803ENSSTOG00000022475RPA19871.803Ictidomys_tridecemlineatus
ENSCCAG00000010981RPA19579.526ENSJJAG00000000876Rpa19879.526Jaculus_jaculus
ENSCCAG00000010981RPA19961.458ENSKMAG00000000234RPA19061.458Kryptolebias_marmoratus
ENSCCAG00000010981RPA19949.919ENSKMAG00000005605rpa19949.435Kryptolebias_marmoratus
ENSCCAG00000010981RPA19951.702ENSLBEG00000021604rpa19950.812Labrus_bergylta
ENSCCAG00000010981RPA19651.577ENSLBEG00000002281RPA17951.577Labrus_bergylta
ENSCCAG00000010981RPA17957.769ENSLACG00000007210RPA19658.910Latimeria_chalumnae
ENSCCAG00000010981RPA19956.472ENSLOCG00000006397rpa19956.311Lepisosteus_oculatus
ENSCCAG00000010981RPA19975.923ENSLAFG00000015354RPA19975.923Loxodonta_africana
ENSCCAG00000010981RPA18093.049ENSMFAG00000036138-8893.049Macaca_fascicularis
ENSCCAG00000010981RPA19885.035ENSMMUG00000011604-9982.810Macaca_mulatta
ENSCCAG00000010981RPA110076.699ENSMMUG00000002442-10076.175Macaca_mulatta
ENSCCAG00000010981RPA110080.389ENSMNEG00000031632-10080.389Macaca_nemestrina
ENSCCAG00000010981RPA18791.089ENSMNEG00000029837-10084.000Macaca_nemestrina
ENSCCAG00000010981RPA19882.521ENSMLEG00000038768-10080.570Mandrillus_leucophaeus
ENSCCAG00000010981RPA19953.247ENSMAMG00000017993rpa19952.512Mastacembelus_armatus
ENSCCAG00000010981RPA19944.955ENSMAMG00000020097RPA18451.562Mastacembelus_armatus
ENSCCAG00000010981RPA19949.060ENSMZEG00005024731RPA19948.276Maylandia_zebra
ENSCCAG00000010981RPA19952.520ENSMZEG00005007551rpa19952.026Maylandia_zebra
ENSCCAG00000010981RPA19961.990ENSMGAG00000005315RPA19861.827Meleagris_gallopavo
ENSCCAG00000010981RPA19777.944ENSMAUG00000010474Rpa19977.944Mesocricetus_auratus
ENSCCAG00000010981RPA110080.291ENSMICG00000012867RPA110080.291Microcebus_murinus
ENSCCAG00000010981RPA19976.786ENSMOCG00000013019Rpa19976.786Microtus_ochrogaster
ENSCCAG00000010981RPA19647.973ENSMMOG00000010868RPA19647.973Mola_mola
ENSCCAG00000010981RPA19951.634ENSMMOG00000014292rpa19952.027Mola_mola
ENSCCAG00000010981RPA19972.977ENSMODG00000010549RPA19972.977Monodelphis_domestica
ENSCCAG00000010981RPA19450.679ENSMALG00000001208RPA17655.670Monopterus_albus
ENSCCAG00000010981RPA19952.614ENSMALG00000011453rpa19952.855Monopterus_albus
ENSCCAG00000010981RPA19976.252MGP_CAROLIEiJ_G0016734Rpa19975.929Mus_caroli
ENSCCAG00000010981RPA19974.400ENSMUSG00000000751Rpa19974.080Mus_musculus
ENSCCAG00000010981RPA19976.849MGP_PahariEiJ_G0017871Rpa19976.527Mus_pahari
ENSCCAG00000010981RPA19974.441MGP_SPRETEiJ_G0017577Rpa19973.642Mus_spretus
ENSCCAG00000010981RPA110077.060ENSMPUG00000013119RPA110077.060Mustela_putorius_furo
ENSCCAG00000010981RPA110075.962ENSMLUG00000006113RPA110075.962Myotis_lucifugus
ENSCCAG00000010981RPA19577.027ENSNGAG00000004522Rpa19477.027Nannospalax_galili
ENSCCAG00000010981RPA19452.487ENSNBRG00000020595rpa19952.144Neolamprologus_brichardi
ENSCCAG00000010981RPA19648.288ENSNBRG00000009672RPA19547.774Neolamprologus_brichardi
ENSCCAG00000010981RPA110083.306ENSNLEG00000017149RPA110083.306Nomascus_leucogenys
ENSCCAG00000010981RPA19886.869ENSMEUG00000006714RPA19086.869Notamacropus_eugenii
ENSCCAG00000010981RPA19576.333ENSODEG00000009038RPA19676.333Octodon_degus
ENSCCAG00000010981RPA19952.809ENSONIG00000013135rpa19952.320Oreochromis_niloticus
ENSCCAG00000010981RPA19771.310ENSOANG00000010880RPA19971.476Ornithorhynchus_anatinus
ENSCCAG00000010981RPA110074.884ENSOCUG00000001504RPA110074.884Oryctolagus_cuniculus
ENSCCAG00000010981RPA19945.579ENSORLG00000003368RPA18452.511Oryzias_latipes
ENSCCAG00000010981RPA19952.033ENSORLG00000004856rpa19951.629Oryzias_latipes
ENSCCAG00000010981RPA19944.361ENSORLG00020015284RPA18351.826Oryzias_latipes_hni
ENSCCAG00000010981RPA19952.033ENSORLG00020008980rpa19951.629Oryzias_latipes_hni
ENSCCAG00000010981RPA19952.033ENSORLG00015013982rpa19951.629Oryzias_latipes_hsok
ENSCCAG00000010981RPA16849.770ENSORLG00015005867-9849.770Oryzias_latipes_hsok
ENSCCAG00000010981RPA19945.666ENSORLG00015020383RPA19945.242Oryzias_latipes_hsok
ENSCCAG00000010981RPA19950.326ENSOMEG00000004704rpa19949.912Oryzias_melastigma
ENSCCAG00000010981RPA19449.123ENSOMEG00000011040RPA19949.123Oryzias_melastigma
ENSCCAG00000010981RPA19486.667ENSOGAG00000029379-8187.879Otolemur_garnettii
ENSCCAG00000010981RPA110078.675ENSOGAG00000005581-10077.544Otolemur_garnettii
ENSCCAG00000010981RPA110079.254ENSOARG00000014479RPA110079.254Ovis_aries
ENSCCAG00000010981RPA110083.468ENSPPAG00000039680RPA110083.468Pan_paniscus
ENSCCAG00000010981RPA110077.097ENSPPRG00000011807RPA19977.097Panthera_pardus
ENSCCAG00000010981RPA110076.935ENSPTIG00000007898RPA19976.935Panthera_tigris_altaica
ENSCCAG00000010981RPA110083.468ENSPTRG00000008539RPA110083.468Pan_troglodytes
ENSCCAG00000010981RPA110083.144ENSPANG00000024592RPA110083.144Papio_anubis
ENSCCAG00000010981RPA19451.195ENSPKIG00000008053rpa19451.195Paramormyrops_kingsleyae
ENSCCAG00000010981RPA19762.938ENSPSIG00000015617RPA19962.791Pelodiscus_sinensis
ENSCCAG00000010981RPA19950.651ENSPMGG00000011589rpa19950.814Periophthalmus_magnuspinnatus
ENSCCAG00000010981RPA19944.984ENSPMGG00000000543RPA19945.614Periophthalmus_magnuspinnatus
ENSCCAG00000010981RPA19977.435ENSPEMG00000021061Rpa19977.435Peromyscus_maniculatus_bairdii
ENSCCAG00000010981RPA110071.774ENSPCIG00000019049RPA19971.774Phascolarctos_cinereus
ENSCCAG00000010981RPA19952.700ENSPFOG00000003987rpa19951.961Poecilia_formosa
ENSCCAG00000010981RPA19952.700ENSPLAG00000004984rpa19952.295Poecilia_latipinna
ENSCCAG00000010981RPA19445.600ENSPLAG00000008844-9745.192Poecilia_latipinna
ENSCCAG00000010981RPA19952.700ENSPMEG00000020602rpa19952.910Poecilia_mexicana
ENSCCAG00000010981RPA19445.295ENSPMEG00000003627-9745.353Poecilia_mexicana
ENSCCAG00000010981RPA19054.902ENSPREG00000010174rpa19552.481Poecilia_reticulata
ENSCCAG00000010981RPA19944.721ENSPREG00000010119RPA110042.989Poecilia_reticulata
ENSCCAG00000010981RPA110080.452ENSPCOG00000001799RPA110080.452Propithecus_coquereli
ENSCCAG00000010981RPA19978.930ENSPVAG00000002149RPA19978.930Pteropus_vampyrus
ENSCCAG00000010981RPA19952.683ENSPNYG00000016316rpa19952.414Pundamilia_nyererei
ENSCCAG00000010981RPA19948.746ENSPNYG00000024165RPA19947.962Pundamilia_nyererei
ENSCCAG00000010981RPA19963.636ENSPNAG00000008599rpa19063.636Pygocentrus_nattereri
ENSCCAG00000010981RPA19787.781ENSRNOG00000003123Rpa18987.781Rattus_norvegicus
ENSCCAG00000010981RPA110082.039ENSRBIG00000036587RPA110081.524Rhinopithecus_bieti
ENSCCAG00000010981RPA110084.337ENSRROG00000043278RPA110083.793Rhinopithecus_roxellana
ENSCCAG00000010981RPA19930.851YAR007CRFA18930.277Saccharomyces_cerevisiae
ENSCCAG00000010981RPA19882.178ENSSBOG00000030233RPA110082.178Saimiri_boliviensis_boliviensis
ENSCCAG00000010981RPA19972.313ENSSHAG00000007969RPA19872.638Sarcophilus_harrisii
ENSCCAG00000010981RPA19953.659ENSSFOG00015005362rpa19253.496Scleropages_formosus
ENSCCAG00000010981RPA19943.202ENSSMAG00000019746RPA110041.742Scophthalmus_maximus
ENSCCAG00000010981RPA19953.834ENSSDUG00000011949rpa19953.420Seriola_dumerili
ENSCCAG00000010981RPA19944.217ENSSDUG00000016358RPA18252.715Seriola_dumerili
ENSCCAG00000010981RPA19953.997ENSSLDG00000011806rpa19953.257Seriola_lalandi_dorsalis
ENSCCAG00000010981RPA19943.459ENSSLDG00000020784RPA18152.489Seriola_lalandi_dorsalis
ENSCCAG00000010981RPA17885.786ENSSARG00000007506RPA17285.786Sorex_araneus
ENSCCAG00000010981RPA19659.365ENSSPUG00000007223RPA19959.197Sphenodon_punctatus
ENSCCAG00000010981RPA19952.529ENSSPAG00000009903rpa19951.629Stegastes_partitus
ENSCCAG00000010981RPA19650.924ENSSPAG00000011165RPA19750.340Stegastes_partitus
ENSCCAG00000010981RPA19878.642ENSSSCG00000017822RPA110078.808Sus_scrofa
ENSCCAG00000010981RPA110061.452ENSTGUG00000005775RPA19961.613Taeniopygia_guttata
ENSCCAG00000010981RPA19848.703ENSTRUG00000000405RPA17753.425Takifugu_rubripes
ENSCCAG00000010981RPA19952.951ENSTRUG00000003616rpa19952.951Takifugu_rubripes
ENSCCAG00000010981RPA19954.281ENSTNIG00000016199rpa19953.548Tetraodon_nigroviridis
ENSCCAG00000010981RPA17692.857ENSTBEG00000002709RPA18192.857Tupaia_belangeri
ENSCCAG00000010981RPA19977.110ENSTTRG00000001169RPA19977.110Tursiops_truncatus
ENSCCAG00000010981RPA18693.478ENSUAMG00000015676RPA19792.308Ursus_americanus
ENSCCAG00000010981RPA110077.383ENSUMAG00000009328RPA110077.383Ursus_maritimus
ENSCCAG00000010981RPA110076.337ENSVPAG00000009443RPA110076.337Vicugna_pacos
ENSCCAG00000010981RPA110077.544ENSVVUG00000021715RPA110077.544Vulpes_vulpes
ENSCCAG00000010981RPA19962.052ENSXETG00000013538rpa19962.378Xenopus_tropicalis
ENSCCAG00000010981RPA19051.071ENSXCOG00000010068rpa19450.542Xiphophorus_couchianus
ENSCCAG00000010981RPA19447.368ENSXCOG00000009899-9946.520Xiphophorus_couchianus
ENSCCAG00000010981RPA19951.391ENSXMAG00000004102rpa19952.028Xiphophorus_maculatus
ENSCCAG00000010981RPA19951.556ENSXMAG00000010333RPA19151.556Xiphophorus_maculatus

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