EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000011754 (Gene tree)
Gene ID: 108310907
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 111038 bases
Position: chrKV389535.1:4635077-4746114
Accession: 108310906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000001858	ResIII	PF04851.15	1.4e-11	1	1
ENSCCAP00000001854	ResIII	PF04851.15	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000012701	-	1257	XM_017538116	ENSCCAP00000001866	117 (aa)	XP_017393605	A0A2K5PE07
ENSCCAT00000012789	-	1169	XM_017538118	ENSCCAP00000001893	299 (aa)	XP_017393607	A0A2K5PE39
ENSCCAT00000012656	-	3517	XM_017538115	ENSCCAP00000001858	724 (aa)	XP_017393604	A0A2K5PE01
ENSCCAT00000012628	-	3601	XM_017538109	ENSCCAP00000001854	908 (aa)	XP_017393598	A0A2K5PE00

Gene Model

Click here to download ENSCCAG00000011754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000011754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000011754	-	68	33.397	ENSCCAG00000022264	SMARCAD1	84	33.397
ENSCCAG00000011754	-	63	33.824	ENSCCAG00000036079	CHD1L	86	33.158
ENSCCAG00000011754	-	89	43.976	ENSCCAG00000025783	RAD54L	84	43.976
ENSCCAG00000011754	-	74	32.060	ENSCCAG00000026980	ERCC6L2	82	32.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000011754	-	100	96.419	ENSG00000197275	RAD54B	100	94.731	Homo_sapiens
ENSCCAG00000011754	-	100	96.419	ENSG00000265817	FSBP	100	96.419	Homo_sapiens
ENSCCAG00000011754	-	99	88.690	ENSAMEG00000005834	-	99	85.730	Ailuropoda_melanoleuca
ENSCCAG00000011754	-	99	57.995	ENSACIG00000013005	rad54b	99	55.206	Amphilophus_citrinellus
ENSCCAG00000011754	-	99	59.264	ENSAOCG00000008523	rad54b	99	55.048	Amphiprion_ocellaris
ENSCCAG00000011754	-	99	58.276	ENSAPEG00000001673	rad54b	99	55.459	Amphiprion_percula
ENSCCAG00000011754	-	99	58.060	ENSATEG00000001527	rad54b	99	54.684	Anabas_testudineus
ENSCCAG00000011754	-	99	75.242	ENSAPLG00000014366	-	99	69.197	Anas_platyrhynchos
ENSCCAG00000011754	-	100	70.467	ENSACAG00000003671	-	99	70.765	Anolis_carolinensis
ENSCCAG00000011754	-	90	97.531	ENSANAG00000019528	-	100	97.531	Aotus_nancymaae
ENSCCAG00000011754	-	99	57.995	ENSACLG00000007826	rad54b	99	54.555	Astatotilapia_calliptera
ENSCCAG00000011754	-	99	57.163	ENSAMXG00000039985	rad54b	95	57.519	Astyanax_mexicanus
ENSCCAG00000011754	-	99	87.017	ENSBTAG00000000632	RAD54B	99	84.268	Bos_taurus
ENSCCAG00000011754	-	76	40.827	WBGene00013792	Y116A8C.13	97	33.372	Caenorhabditis_elegans
ENSCCAG00000011754	-	100	99.172	ENSCJAG00000000080	-	100	99.172	Callithrix_jacchus
ENSCCAG00000011754	-	99	86.897	ENSCAFG00000009179	RAD54B	99	83.315	Canis_familiaris
ENSCCAG00000011754	-	99	86.759	ENSCAFG00020012084	-	99	83.205	Canis_lupus_dingo
ENSCCAG00000011754	-	99	86.878	ENSCHIG00000008230	-	99	84.048	Capra_hircus
ENSCCAG00000011754	-	99	89.517	ENSTSYG00000013234	-	99	88.571	Carlito_syrichta
ENSCCAG00000011754	-	99	86.740	ENSCPOG00000011643	-	99	82.728	Cavia_porcellus
ENSCCAG00000011754	-	100	95.862	ENSCATG00000030661	-	100	95.862	Cercocebus_atys
ENSCCAG00000011754	-	100	86.777	ENSCLAG00000010476	-	100	83.535	Chinchilla_lanigera
ENSCCAG00000011754	-	100	95.586	ENSCSAG00000012712	-	100	94.176	Chlorocebus_sabaeus
ENSCCAG00000011754	-	100	75.824	ENSCPBG00000003204	-	99	70.726	Chrysemys_picta_bellii
ENSCCAG00000011754	-	100	95.586	ENSCANG00000017939	-	100	95.586	Colobus_angolensis_palliatus
ENSCCAG00000011754	-	99	82.345	ENSCGRG00001020184	Rad54b	99	78.658	Cricetulus_griseus_chok1gshd
ENSCCAG00000011754	-	99	80.966	ENSCGRG00000016752	Rad54b	99	77.619	Cricetulus_griseus_crigri
ENSCCAG00000011754	-	99	57.750	ENSCSEG00000001601	rad54b	99	58.786	Cynoglossus_semilaevis
ENSCCAG00000011754	-	99	60.164	ENSCVAG00000009200	rad54b	99	56.366	Cyprinodon_variegatus
ENSCCAG00000011754	-	99	58.390	ENSDARG00000092134	rad54b	99	60.522	Danio_rerio
ENSCCAG00000011754	-	99	86.538	ENSDNOG00000015535	-	99	83.571	Dasypus_novemcinctus
ENSCCAG00000011754	-	99	87.828	ENSDORG00000002492	Rad54b	99	83.480	Dipodomys_ordii
ENSCCAG00000011754	-	83	86.567	ENSETEG00000010605	-	100	81.599	Echinops_telfairi
ENSCCAG00000011754	-	99	49.523	ENSEBUG00000009104	rad54b	98	46.574	Eptatretus_burgeri
ENSCCAG00000011754	-	99	86.777	ENSEASG00005004021	-	99	85.294	Equus_asinus_asinus
ENSCCAG00000011754	-	99	87.190	ENSECAG00000021949	-	99	85.730	Equus_caballus
ENSCCAG00000011754	-	88	80.000	ENSEEUG00000008056	-	83	80.000	Erinaceus_europaeus
ENSCCAG00000011754	-	99	59.041	ENSELUG00000009287	rad54b	99	54.228	Esox_lucius
ENSCCAG00000011754	-	99	88.552	ENSFCAG00000015513	-	99	88.552	Felis_catus
ENSCCAG00000011754	-	99	74.965	ENSFALG00000005467	-	99	68.838	Ficedula_albicollis
ENSCCAG00000011754	-	98	88.136	ENSFDAG00000020541	-	100	85.149	Fukomys_damarensis
ENSCCAG00000011754	-	99	57.959	ENSFHEG00000014382	rad54b	90	57.837	Fundulus_heteroclitus
ENSCCAG00000011754	-	99	55.707	ENSGMOG00000014774	rad54b	98	56.855	Gadus_morhua
ENSCCAG00000011754	-	100	73.764	ENSGALG00000043597	RAD54B	99	67.896	Gallus_gallus
ENSCCAG00000011754	-	99	58.824	ENSGAFG00000007901	rad54b	99	54.973	Gambusia_affinis
ENSCCAG00000011754	-	99	58.424	ENSGACG00000009128	rad54b	99	54.908	Gasterosteus_aculeatus
ENSCCAG00000011754	-	100	75.412	ENSGAGG00000018747	-	99	70.294	Gopherus_agassizii
ENSCCAG00000011754	-	99	96.276	ENSGGOG00000023516	-	99	94.176	Gorilla_gorilla
ENSCCAG00000011754	-	99	57.838	ENSHBUG00000016017	rad54b	99	53.919	Haplochromis_burtoni
ENSCCAG00000011754	-	99	85.616	ENSHGLG00000008263	RAD54B	99	82.842	Heterocephalus_glaber_female
ENSCCAG00000011754	-	99	84.511	ENSHGLG00100008108	-	99	82.085	Heterocephalus_glaber_male
ENSCCAG00000011754	-	99	56.599	ENSHCOG00000004764	rad54b	98	55.734	Hippocampus_comes
ENSCCAG00000011754	-	99	57.572	ENSIPUG00000018531	rad54b	99	52.537	Ictalurus_punctatus
ENSCCAG00000011754	-	99	87.065	ENSSTOG00000010791	-	99	83.757	Ictidomys_tridecemlineatus
ENSCCAG00000011754	-	99	84.966	ENSJJAG00000010314	Rad54b	99	81.538	Jaculus_jaculus
ENSCCAG00000011754	-	99	56.831	ENSKMAG00000004744	rad54b	99	52.769	Kryptolebias_marmoratus
ENSCCAG00000011754	-	99	69.433	ENSLACG00000000859	-	100	69.693	Latimeria_chalumnae
ENSCCAG00000011754	-	99	63.724	ENSLOCG00000010100	rad54b	96	62.958	Lepisosteus_oculatus
ENSCCAG00000011754	-	100	87.052	ENSLAFG00000015315	-	100	83.787	Loxodonta_africana
ENSCCAG00000011754	-	100	95.724	ENSMFAG00000031629	-	100	95.724	Macaca_fascicularis
ENSCCAG00000011754	-	100	95.724	ENSMMUG00000005659	-	100	94.286	Macaca_mulatta
ENSCCAG00000011754	-	100	95.586	ENSMNEG00000016408	-	100	94.066	Macaca_nemestrina
ENSCCAG00000011754	-	100	96.000	ENSMLEG00000006946	-	100	94.396	Mandrillus_leucophaeus
ENSCCAG00000011754	-	99	58.514	ENSMAMG00000012269	rad54b	99	55.736	Mastacembelus_armatus
ENSCCAG00000011754	-	99	58.130	ENSMZEG00005005281	rad54b	96	58.672	Maylandia_zebra
ENSCCAG00000011754	-	100	73.901	ENSMGAG00000012024	-	99	68.256	Meleagris_gallopavo
ENSCCAG00000011754	-	99	82.207	ENSMAUG00000013586	Rad54b	99	78.218	Mesocricetus_auratus
ENSCCAG00000011754	-	99	89.655	ENSMICG00000000754	-	99	83.297	Microcebus_murinus
ENSCCAG00000011754	-	99	80.579	ENSMOCG00000020035	Rad54b	99	77.193	Microtus_ochrogaster
ENSCCAG00000011754	-	99	57.750	ENSMMOG00000003394	rad54b	99	53.913	Mola_mola
ENSCCAG00000011754	-	99	78.670	ENSMODG00000007343	-	99	76.971	Monodelphis_domestica
ENSCCAG00000011754	-	89	58.540	ENSMALG00000001520	rad54b	99	58.540	Monopterus_albus
ENSCCAG00000011754	-	99	81.517	MGP_CAROLIEiJ_G0025810	Rad54b	100	77.692	Mus_caroli
ENSCCAG00000011754	-	99	81.354	ENSMUSG00000078773	Rad54b	100	77.558	Mus_musculus
ENSCCAG00000011754	-	99	82.044	MGP_PahariEiJ_G0023933	Rad54b	100	77.888	Mus_pahari
ENSCCAG00000011754	-	99	82.207	MGP_SPRETEiJ_G0026758	Rad54b	100	78.242	Mus_spretus
ENSCCAG00000011754	-	99	87.310	ENSMPUG00000008878	-	99	86.403	Mustela_putorius_furo
ENSCCAG00000011754	-	100	87.603	ENSMLUG00000008953	-	100	83.443	Myotis_lucifugus
ENSCCAG00000011754	-	99	85.577	ENSNGAG00000017537	Rad54b	99	82.237	Nannospalax_galili
ENSCCAG00000011754	-	99	58.209	ENSNBRG00000013394	rad54b	99	54.821	Neolamprologus_brichardi
ENSCCAG00000011754	-	100	96.006	ENSNLEG00000003062	-	99	96.006	Nomascus_leucogenys
ENSCCAG00000011754	-	78	78.816	ENSMEUG00000012426	-	83	71.774	Notamacropus_eugenii
ENSCCAG00000011754	-	95	86.006	ENSODEG00000002650	-	95	85.317	Octodon_degus
ENSCCAG00000011754	-	99	85.596	ENSODEG00000019564	-	99	82.690	Octodon_degus
ENSCCAG00000011754	-	99	58.187	ENSONIG00000006067	rad54b	99	54.984	Oreochromis_niloticus
ENSCCAG00000011754	-	99	76.997	ENSOANG00000011348	-	99	76.862	Ornithorhynchus_anatinus
ENSCCAG00000011754	-	99	88.828	ENSOCUG00000016478	-	99	84.666	Oryctolagus_cuniculus
ENSCCAG00000011754	-	99	59.754	ENSORLG00000008918	rad54b	99	62.287	Oryzias_latipes
ENSCCAG00000011754	-	89	62.442	ENSORLG00020012171	rad54b	99	62.442	Oryzias_latipes_hni
ENSCCAG00000011754	-	99	59.405	ENSORLG00015018536	rad54b	99	54.651	Oryzias_latipes_hsok
ENSCCAG00000011754	-	99	59.097	ENSOMEG00000004345	rad54b	99	59.742	Oryzias_melastigma
ENSCCAG00000011754	-	99	88.552	ENSOGAG00000007854	-	99	86.154	Otolemur_garnettii
ENSCCAG00000011754	-	99	86.602	ENSOARG00000007691	-	99	86.173	Ovis_aries
ENSCCAG00000011754	-	100	94.353	ENSPPAG00000029572	-	100	92.975	Pan_paniscus
ENSCCAG00000011754	-	99	88.690	ENSPPRG00000007571	-	99	88.690	Panthera_pardus
ENSCCAG00000011754	-	99	88.690	ENSPTIG00000012670	-	99	88.690	Panthera_tigris_altaica
ENSCCAG00000011754	-	100	96.281	ENSPTRG00000020427	-	100	96.281	Pan_troglodytes
ENSCCAG00000011754	-	100	96.000	ENSPANG00000019566	-	100	94.505	Papio_anubis
ENSCCAG00000011754	-	99	63.172	ENSPKIG00000014974	rad54b	99	58.523	Paramormyrops_kingsleyae
ENSCCAG00000011754	-	100	73.626	ENSPSIG00000002383	-	98	73.144	Pelodiscus_sinensis
ENSCCAG00000011754	-	99	81.931	ENSPEMG00000012133	Rad54b	99	78.658	Peromyscus_maniculatus_bairdii
ENSCCAG00000011754	-	100	58.130	ENSPMAG00000002916	rad54b	99	58.603	Petromyzon_marinus
ENSCCAG00000011754	-	100	79.448	ENSPCIG00000020151	-	94	77.403	Phascolarctos_cinereus
ENSCCAG00000011754	-	99	59.537	ENSPFOG00000023411	rad54b	99	54.362	Poecilia_formosa
ENSCCAG00000011754	-	99	59.537	ENSPLAG00000010430	rad54b	99	54.681	Poecilia_latipinna
ENSCCAG00000011754	-	99	59.809	ENSPMEG00000016873	rad54b	99	54.574	Poecilia_mexicana
ENSCCAG00000011754	-	99	59.563	ENSPREG00000018443	rad54b	99	54.681	Poecilia_reticulata
ENSCCAG00000011754	-	100	95.868	ENSPPYG00000018750	-	100	94.402	Pongo_abelii
ENSCCAG00000011754	-	99	89.655	ENSPCOG00000026845	-	99	89.655	Propithecus_coquereli
ENSCCAG00000011754	-	99	88.828	ENSPVAG00000000261	-	92	88.799	Pteropus_vampyrus
ENSCCAG00000011754	-	99	58.095	ENSPNYG00000018303	rad54b	96	59.222	Pundamilia_nyererei
ENSCCAG00000011754	-	100	57.766	ENSPNAG00000000295	rad54b	99	54.028	Pygocentrus_nattereri
ENSCCAG00000011754	-	99	79.586	ENSRNOG00000039949	Rad54b	99	75.028	Rattus_norvegicus
ENSCCAG00000011754	-	100	95.172	ENSRBIG00000020419	-	100	93.956	Rhinopithecus_bieti
ENSCCAG00000011754	-	100	95.172	ENSRROG00000039897	-	100	93.956	Rhinopithecus_roxellana
ENSCCAG00000011754	-	77	42.998	YBR073W	RDH54	61	42.998	Saccharomyces_cerevisiae
ENSCCAG00000011754	-	100	99.172	ENSSBOG00000028501	-	100	98.681	Saimiri_boliviensis_boliviensis
ENSCCAG00000011754	-	100	80.138	ENSSHAG00000017038	-	100	74.013	Sarcophilus_harrisii
ENSCCAG00000011754	-	79	65.614	ENSSFOG00015008483	rad54b	88	65.614	Scleropages_formosus
ENSCCAG00000011754	-	99	58.516	ENSSMAG00000018659	rad54b	99	54.785	Scophthalmus_maximus
ENSCCAG00000011754	-	98	58.921	ENSSDUG00000001122	rad54b	98	54.131	Seriola_dumerili
ENSCCAG00000011754	-	99	59.010	ENSSLDG00000013787	rad54b	99	53.992	Seriola_lalandi_dorsalis
ENSCCAG00000011754	-	100	73.388	ENSSPUG00000016497	-	99	68.122	Sphenodon_punctatus
ENSCCAG00000011754	-	99	58.936	ENSSPAG00000012800	rad54b	99	55.943	Stegastes_partitus
ENSCCAG00000011754	-	100	87.155	ENSSSCG00000006101	-	99	87.093	Sus_scrofa
ENSCCAG00000011754	-	99	74.483	ENSTGUG00000011880	-	99	68.256	Taeniopygia_guttata
ENSCCAG00000011754	-	99	58.493	ENSTRUG00000010015	rad54b	99	53.277	Takifugu_rubripes
ENSCCAG00000011754	-	99	83.126	ENSTTRG00000006312	-	99	82.068	Tursiops_truncatus
ENSCCAG00000011754	-	99	88.828	ENSUMAG00000016401	-	99	85.730	Ursus_maritimus
ENSCCAG00000011754	-	99	87.414	ENSVPAG00000003157	-	99	83.572	Vicugna_pacos
ENSCCAG00000011754	-	99	58.516	ENSXETG00000025924	rad54b	99	59.551	Xenopus_tropicalis
ENSCCAG00000011754	-	99	58.824	ENSXMAG00000013141	rad54b	99	54.842	Xiphophorus_maculatus