EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000016652 (Gene tree)
Gene ID: 108309125
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein Sm D1-like
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 360 bases
Position: chrKV389517.1:6384944-6385303
Accession: 108309125
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000002870	LSM	PF01423.22	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000017854	-	360	XM_017535306	ENSCCAP00000002870	119 (aa)	XP_017390795	A0A2K5PGX0

Gene Model

Click here to download ENSCCAG00000016652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000016652's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000016652	-	100	96.639	ENSCCAG00000032658	SNRPD1	100	96.639
ENSCCAG00000016652	-	94	95.536	ENSCCAG00000020611	-	94	95.536
ENSCCAG00000016652	-	81	91.667	ENSCCAG00000005390	-	81	91.667
ENSCCAG00000016652	-	92	30.275	ENSCCAG00000018913	-	60	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000016652	-	100	96.639	ENSG00000167088	SNRPD1	100	97.333	Homo_sapiens
ENSCCAG00000016652	-	94	93.750	ENSAPOG00000019446	snrpd1	61	93.750	Acanthochromis_polyacanthus
ENSCCAG00000016652	-	98	94.872	ENSAMEG00000002576	SNRPD1	100	94.872	Ailuropoda_melanoleuca
ENSCCAG00000016652	-	88	93.333	ENSACIG00000011263	snrpd1	94	93.333	Amphilophus_citrinellus
ENSCCAG00000016652	-	94	93.750	ENSAOCG00000007406	snrpd1	94	93.750	Amphiprion_ocellaris
ENSCCAG00000016652	-	94	89.286	ENSAPEG00000014961	snrpd1	94	89.286	Amphiprion_percula
ENSCCAG00000016652	-	88	93.333	ENSAPEG00000012539	SNRPD1	94	93.333	Amphiprion_percula
ENSCCAG00000016652	-	94	93.750	ENSATEG00000014399	snrpd1	94	93.750	Anabas_testudineus
ENSCCAG00000016652	-	97	96.522	ENSAPLG00000012256	SNRPD1	97	96.522	Anas_platyrhynchos
ENSCCAG00000016652	-	100	96.639	ENSACAG00000006364	SNRPD1	100	96.639	Anolis_carolinensis
ENSCCAG00000016652	-	100	96.639	ENSANAG00000025641	SNRPD1	100	96.639	Aotus_nancymaae
ENSCCAG00000016652	-	88	93.333	ENSACLG00000017406	snrpd1	94	93.333	Astatotilapia_calliptera
ENSCCAG00000016652	-	94	93.750	ENSAMXG00000004589	snrpd1	94	93.750	Astyanax_mexicanus
ENSCCAG00000016652	-	100	96.639	ENSBTAG00000008292	SNRPD1	100	96.639	Bos_taurus
ENSCCAG00000016652	-	94	92.857	ENSBTAG00000047266	-	94	92.857	Bos_taurus
ENSCCAG00000016652	-	81	93.750	ENSBTAG00000012376	-	72	93.750	Bos_taurus
ENSCCAG00000016652	-	79	90.426	ENSBTAG00000055316	-	81	90.426	Bos_taurus
ENSCCAG00000016652	-	74	78.409	WBGene00004916	snr-3	76	73.958	Caenorhabditis_elegans
ENSCCAG00000016652	-	100	96.639	ENSCJAG00000042955	SNRPD1	100	96.639	Callithrix_jacchus
ENSCCAG00000016652	-	100	96.639	ENSCAFG00000018247	SNRPD1	100	96.639	Canis_familiaris
ENSCCAG00000016652	-	80	95.789	ENSCAFG00020015914	SNRPD1	74	95.789	Canis_lupus_dingo
ENSCCAG00000016652	-	94	93.750	ENSCHIG00000005557	SNRPD1	92	95.455	Capra_hircus
ENSCCAG00000016652	-	100	96.639	ENSTSYG00000030028	SNRPD1	100	96.639	Carlito_syrichta
ENSCCAG00000016652	-	91	95.370	ENSCAPG00000008103	SNRPD1	93	95.370	Cavia_aperea
ENSCCAG00000016652	-	100	96.639	ENSCPOG00000004679	SNRPD1	100	96.639	Cavia_porcellus
ENSCCAG00000016652	-	100	96.639	ENSCATG00000039978	SNRPD1	100	96.639	Cercocebus_atys
ENSCCAG00000016652	-	100	96.639	ENSCLAG00000008691	SNRPD1	100	96.639	Chinchilla_lanigera
ENSCCAG00000016652	-	100	96.639	ENSCSAG00000017654	SNRPD1	100	96.639	Chlorocebus_sabaeus
ENSCCAG00000016652	-	100	96.639	ENSCPBG00000023143	SNRPD1	100	96.639	Chrysemys_picta_bellii
ENSCCAG00000016652	-	72	84.884	ENSCING00000024100	-	69	84.884	Ciona_intestinalis
ENSCCAG00000016652	-	73	81.609	ENSCSAVG00000004578	-	69	82.558	Ciona_savignyi
ENSCCAG00000016652	-	81	72.917	ENSCGRG00001009945	-	85	72.917	Cricetulus_griseus_chok1gshd
ENSCCAG00000016652	-	100	96.639	ENSCGRG00001021055	-	100	96.639	Cricetulus_griseus_chok1gshd
ENSCCAG00000016652	-	81	72.917	ENSCGRG00000006224	-	85	72.917	Cricetulus_griseus_crigri
ENSCCAG00000016652	-	100	96.639	ENSCGRG00000000490	-	100	96.639	Cricetulus_griseus_crigri
ENSCCAG00000016652	-	80	91.579	ENSCSEG00000018141	snrpd1	81	91.667	Cynoglossus_semilaevis
ENSCCAG00000016652	-	94	93.750	ENSCVAG00000000534	snrpd1	94	93.750	Cyprinodon_variegatus
ENSCCAG00000016652	-	94	93.750	ENSDARG00000011648	snrpd1	94	93.750	Danio_rerio
ENSCCAG00000016652	-	100	96.639	ENSDNOG00000040310	SNRPD1	100	96.639	Dasypus_novemcinctus
ENSCCAG00000016652	-	100	96.639	ENSDORG00000008349	Snrpd1	100	96.639	Dipodomys_ordii
ENSCCAG00000016652	-	79	80.851	FBgn0261933	SmD1	76	80.851	Drosophila_melanogaster
ENSCCAG00000016652	-	68	95.062	ENSETEG00000011689	SNRPD1	68	95.062	Echinops_telfairi
ENSCCAG00000016652	-	94	91.071	ENSEBUG00000003170	snrpd1	94	91.071	Eptatretus_burgeri
ENSCCAG00000016652	-	94	96.429	ENSEASG00005002433	SNRPD1	100	96.429	Equus_asinus_asinus
ENSCCAG00000016652	-	94	96.429	ENSECAG00000014373	SNRPD1	100	96.429	Equus_caballus
ENSCCAG00000016652	-	75	95.506	ENSEEUG00000004987	SNRPD1	100	95.506	Erinaceus_europaeus
ENSCCAG00000016652	-	93	81.982	ENSELUG00000000088	snrpd1	79	91.489	Esox_lucius
ENSCCAG00000016652	-	100	96.639	ENSFCAG00000012352	SNRPD1	100	96.639	Felis_catus
ENSCCAG00000016652	-	94	96.429	ENSFALG00000002646	SNRPD1	100	96.429	Ficedula_albicollis
ENSCCAG00000016652	-	94	93.750	ENSGMOG00000015607	snrpd1	94	93.750	Gadus_morhua
ENSCCAG00000016652	-	100	96.639	ENSGALG00000041334	SNRPD1	100	96.639	Gallus_gallus
ENSCCAG00000016652	-	94	93.750	ENSGAFG00000011171	snrpd1	94	93.750	Gambusia_affinis
ENSCCAG00000016652	-	94	93.750	ENSGACG00000005201	SNRPD1	94	93.750	Gasterosteus_aculeatus
ENSCCAG00000016652	-	100	96.639	ENSGAGG00000011197	SNRPD1	100	96.639	Gopherus_agassizii
ENSCCAG00000016652	-	81	90.625	ENSGGOG00000026706	-	80	90.625	Gorilla_gorilla
ENSCCAG00000016652	-	100	96.639	ENSGGOG00000041053	SNRPD1	100	96.639	Gorilla_gorilla
ENSCCAG00000016652	-	94	93.750	ENSHBUG00000003236	snrpd1	94	93.750	Haplochromis_burtoni
ENSCCAG00000016652	-	100	96.639	ENSHGLG00000007152	SNRPD1	100	96.639	Heterocephalus_glaber_female
ENSCCAG00000016652	-	100	96.639	ENSHGLG00100008618	SNRPD1	100	96.639	Heterocephalus_glaber_male
ENSCCAG00000016652	-	94	93.750	ENSIPUG00000003576	snrpd1	94	93.750	Ictalurus_punctatus
ENSCCAG00000016652	-	100	96.639	ENSSTOG00000000485	SNRPD1	100	96.639	Ictidomys_tridecemlineatus
ENSCCAG00000016652	-	100	96.639	ENSJJAG00000017698	Snrpd1	100	96.639	Jaculus_jaculus
ENSCCAG00000016652	-	94	93.750	ENSKMAG00000005987	snrpd1	94	93.750	Kryptolebias_marmoratus
ENSCCAG00000016652	-	94	93.750	ENSLBEG00000003327	snrpd1	94	93.750	Labrus_bergylta
ENSCCAG00000016652	-	100	96.639	ENSLACG00000001955	SNRPD1	100	96.639	Latimeria_chalumnae
ENSCCAG00000016652	-	92	94.545	ENSLOCG00000002003	snrpd1	94	94.545	Lepisosteus_oculatus
ENSCCAG00000016652	-	93	94.595	ENSLAFG00000005819	SNRPD1	94	94.595	Loxodonta_africana
ENSCCAG00000016652	-	100	96.639	ENSMFAG00000042080	SNRPD1	100	96.639	Macaca_fascicularis
ENSCCAG00000016652	-	96	96.491	ENSMMUG00000003992	SNRPD1	97	96.491	Macaca_mulatta
ENSCCAG00000016652	-	100	96.639	ENSMNEG00000041296	SNRPD1	100	96.639	Macaca_nemestrina
ENSCCAG00000016652	-	100	96.639	ENSMLEG00000028659	SNRPD1	100	96.639	Mandrillus_leucophaeus
ENSCCAG00000016652	-	94	93.750	ENSMAMG00000012971	snrpd1	94	93.750	Mastacembelus_armatus
ENSCCAG00000016652	-	94	93.750	ENSMZEG00005004685	snrpd1	94	93.750	Maylandia_zebra
ENSCCAG00000016652	-	97	96.522	ENSMGAG00000011598	SNRPD1	95	96.522	Meleagris_gallopavo
ENSCCAG00000016652	-	82	90.722	ENSMAUG00000006829	-	59	95.556	Mesocricetus_auratus
ENSCCAG00000016652	-	81	79.167	ENSMAUG00000016502	-	86	79.167	Mesocricetus_auratus
ENSCCAG00000016652	-	81	79.167	ENSMAUG00000016467	-	86	79.167	Mesocricetus_auratus
ENSCCAG00000016652	-	100	96.639	ENSMICG00000044066	SNRPD1	100	96.639	Microcebus_murinus
ENSCCAG00000016652	-	100	96.639	ENSMOCG00000017367	Snrpd1	100	96.639	Microtus_ochrogaster
ENSCCAG00000016652	-	94	93.750	ENSMMOG00000019089	snrpd1	94	93.750	Mola_mola
ENSCCAG00000016652	-	100	96.639	ENSMODG00000021487	SNRPD1	100	96.639	Monodelphis_domestica
ENSCCAG00000016652	-	94	93.750	ENSMALG00000014459	snrpd1	94	93.750	Monopterus_albus
ENSCCAG00000016652	-	100	96.639	MGP_CAROLIEiJ_G0021994	Snrpd1	100	96.639	Mus_caroli
ENSCCAG00000016652	-	100	96.639	ENSMUSG00000002477	Snrpd1	100	96.639	Mus_musculus
ENSCCAG00000016652	-	100	96.639	MGP_PahariEiJ_G0018731	Snrpd1	100	96.639	Mus_pahari
ENSCCAG00000016652	-	100	96.639	MGP_SPRETEiJ_G0022910	Snrpd1	100	96.639	Mus_spretus
ENSCCAG00000016652	-	98	94.872	ENSMPUG00000005567	-	100	94.872	Mustela_putorius_furo
ENSCCAG00000016652	-	94	95.536	ENSMPUG00000020041	-	94	95.536	Mustela_putorius_furo
ENSCCAG00000016652	-	79	94.681	ENSMLUG00000009124	SNRPD1	73	94.681	Myotis_lucifugus
ENSCCAG00000016652	-	100	96.639	ENSNGAG00000023946	Snrpd1	100	96.639	Nannospalax_galili
ENSCCAG00000016652	-	79	92.553	ENSNBRG00000012119	snrpd1	78	92.553	Neolamprologus_brichardi
ENSCCAG00000016652	-	100	94.118	ENSNLEG00000031430	SNRPD1	100	94.118	Nomascus_leucogenys
ENSCCAG00000016652	-	100	96.639	ENSODEG00000005764	SNRPD1	100	96.639	Octodon_degus
ENSCCAG00000016652	-	94	93.750	ENSONIG00000002486	snrpd1	94	93.750	Oreochromis_niloticus
ENSCCAG00000016652	-	82	86.735	ENSOANG00000004638	-	82	86.735	Ornithorhynchus_anatinus
ENSCCAG00000016652	-	98	94.872	ENSOCUG00000023761	-	100	94.872	Oryctolagus_cuniculus
ENSCCAG00000016652	-	94	95.536	ENSOCUG00000014399	-	94	95.536	Oryctolagus_cuniculus
ENSCCAG00000016652	-	88	93.333	ENSORLG00000012516	snrpd1	94	93.333	Oryzias_latipes
ENSCCAG00000016652	-	94	93.750	ENSORLG00020005743	snrpd1	94	93.750	Oryzias_latipes_hni
ENSCCAG00000016652	-	94	93.750	ENSORLG00015013402	snrpd1	94	93.750	Oryzias_latipes_hsok
ENSCCAG00000016652	-	94	93.750	ENSOMEG00000011571	snrpd1	94	93.750	Oryzias_melastigma
ENSCCAG00000016652	-	100	93.277	ENSOGAG00000007833	SNRPD1	100	93.277	Otolemur_garnettii
ENSCCAG00000016652	-	81	95.833	ENSOARG00000003413	-	72	95.833	Ovis_aries
ENSCCAG00000016652	-	100	96.639	ENSPPAG00000042593	SNRPD1	100	96.639	Pan_paniscus
ENSCCAG00000016652	-	100	96.639	ENSPPRG00000002399	SNRPD1	100	96.639	Panthera_pardus
ENSCCAG00000016652	-	94	71.429	ENSPPRG00000005009	-	92	71.429	Panthera_pardus
ENSCCAG00000016652	-	96	96.491	ENSPTIG00000013206	SNRPD1	100	96.491	Panthera_tigris_altaica
ENSCCAG00000016652	-	86	90.196	ENSPTRG00000050159	-	87	90.196	Pan_troglodytes
ENSCCAG00000016652	-	100	96.639	ENSPTRG00000009909	SNRPD1	100	96.639	Pan_troglodytes
ENSCCAG00000016652	-	100	96.639	ENSPANG00000023478	SNRPD1	100	96.639	Papio_anubis
ENSCCAG00000016652	-	94	94.643	ENSPKIG00000003985	SNRPD1	94	94.643	Paramormyrops_kingsleyae
ENSCCAG00000016652	-	88	92.381	ENSPKIG00000021610	snrpd1	94	92.381	Paramormyrops_kingsleyae
ENSCCAG00000016652	-	94	93.750	ENSPMGG00000001862	snrpd1	94	93.750	Periophthalmus_magnuspinnatus
ENSCCAG00000016652	-	100	96.639	ENSPEMG00000014773	-	100	96.639	Peromyscus_maniculatus_bairdii
ENSCCAG00000016652	-	86	80.769	ENSPMAG00000003938	-	85	80.769	Petromyzon_marinus
ENSCCAG00000016652	-	100	96.639	ENSPCIG00000020320	SNRPD1	100	96.639	Phascolarctos_cinereus
ENSCCAG00000016652	-	81	92.708	ENSPFOG00000012448	SNRPD1	85	92.708	Poecilia_formosa
ENSCCAG00000016652	-	81	92.708	ENSPLAG00000006738	snrpd1	85	92.708	Poecilia_latipinna
ENSCCAG00000016652	-	81	92.708	ENSPMEG00000021942	snrpd1	85	92.708	Poecilia_mexicana
ENSCCAG00000016652	-	94	93.750	ENSPREG00000007094	snrpd1	94	93.750	Poecilia_reticulata
ENSCCAG00000016652	-	100	96.639	ENSPPYG00000025874	SNRPD1	100	96.639	Pongo_abelii
ENSCCAG00000016652	-	100	96.639	ENSPCOG00000013327	SNRPD1	100	96.639	Propithecus_coquereli
ENSCCAG00000016652	-	100	96.639	ENSPVAG00000005511	SNRPD1	80	96.639	Pteropus_vampyrus
ENSCCAG00000016652	-	94	92.857	ENSPNAG00000017824	snrpd1	94	92.857	Pygocentrus_nattereri
ENSCCAG00000016652	-	100	96.639	ENSRNOG00000013714	Snrpd1	100	96.639	Rattus_norvegicus
ENSCCAG00000016652	-	100	96.639	ENSRBIG00000022996	SNRPD1	100	96.639	Rhinopithecus_bieti
ENSCCAG00000016652	-	100	96.639	ENSRROG00000027640	SNRPD1	100	96.639	Rhinopithecus_roxellana
ENSCCAG00000016652	-	100	96.639	ENSSBOG00000020998	SNRPD1	100	96.639	Saimiri_boliviensis_boliviensis
ENSCCAG00000016652	-	100	96.639	ENSSHAG00000011791	SNRPD1	100	96.639	Sarcophilus_harrisii
ENSCCAG00000016652	-	94	92.857	ENSSFOG00015008809	-	94	92.857	Scleropages_formosus
ENSCCAG00000016652	-	94	92.857	ENSSFOG00015022253	-	94	92.857	Scleropages_formosus
ENSCCAG00000016652	-	94	92.857	ENSSMAG00000008765	snrpd1	94	92.857	Scophthalmus_maximus
ENSCCAG00000016652	-	91	92.593	ENSSDUG00000010521	snrpd1	92	92.593	Seriola_dumerili
ENSCCAG00000016652	-	94	93.750	ENSSLDG00000011858	snrpd1	94	93.750	Seriola_lalandi_dorsalis
ENSCCAG00000016652	-	56	95.522	ENSSARG00000004271	SNRPD1	100	95.522	Sorex_araneus
ENSCCAG00000016652	-	100	96.639	ENSSPUG00000002824	SNRPD1	100	96.639	Sphenodon_punctatus
ENSCCAG00000016652	-	88	93.333	ENSSPAG00000015229	snrpd1	94	93.333	Stegastes_partitus
ENSCCAG00000016652	-	100	96.639	ENSSSCG00000003701	SNRPD1	100	96.639	Sus_scrofa
ENSCCAG00000016652	-	97	96.522	ENSTGUG00000005095	SNRPD1	97	96.522	Taeniopygia_guttata
ENSCCAG00000016652	-	88	92.381	ENSTRUG00000008977	snrpd1	94	92.381	Takifugu_rubripes
ENSCCAG00000016652	-	81	88.542	ENSTNIG00000001224	snrpd1	92	88.542	Tetraodon_nigroviridis
ENSCCAG00000016652	-	68	95.062	ENSTBEG00000013776	SNRPD1	92	95.062	Tupaia_belangeri
ENSCCAG00000016652	-	97	96.522	ENSTTRG00000002654	SNRPD1	100	96.522	Tursiops_truncatus
ENSCCAG00000016652	-	96	96.491	ENSUAMG00000013431	SNRPD1	97	96.491	Ursus_americanus
ENSCCAG00000016652	-	100	96.639	ENSUMAG00000019740	SNRPD1	100	96.639	Ursus_maritimus
ENSCCAG00000016652	-	100	96.639	ENSVPAG00000010056	SNRPD1	80	96.639	Vicugna_pacos
ENSCCAG00000016652	-	94	96.429	ENSVVUG00000004009	SNRPD1	100	96.429	Vulpes_vulpes
ENSCCAG00000016652	-	94	94.643	ENSXETG00000027354	snrpd1	94	94.643	Xenopus_tropicalis
ENSCCAG00000016652	-	94	93.750	ENSXCOG00000020108	snrpd1	94	93.750	Xiphophorus_couchianus
ENSCCAG00000016652	-	94	93.750	ENSXMAG00000003368	snrpd1	94	93.750	Xiphophorus_maculatus