EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000017348 (Gene tree)
Gene ID: 108304258
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 36661 bases
Position: chrKV389479.1:3982976-4019636
Accession: 108304258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000003089	RRM_5	PF13893.6	4e-06	1	1
ENSCCAP00000003077	RRM_5	PF13893.6	4.1e-06	1	1
ENSCCAP00000003089	RRM_1	PF00076.22	7.5e-14	1	1
ENSCCAP00000003077	RRM_1	PF00076.22	7.6e-14	1	1
ENSCCAP00000003089	SAP	PF02037.27	2.5e-10	1	1
ENSCCAP00000003077	SAP	PF02037.27	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000018747	SAFB2-201	3385	XM_017528377	ENSCCAP00000003077	951 (aa)	XP_017383866	A0A2K5PHH8
ENSCCAT00000018797	SAFB2-202	2832	-	ENSCCAP00000003089	943 (aa)	-	A0A2K5PHH2

Gene Model

Click here to download ENSCCAG00000017348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000017348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000017348	SAFB2	94	70.857	ENSCCAG00000020193	SAFB	100	69.602

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000017348	SAFB2	100	96.747	ENSG00000130254	SAFB2	100	96.747	Homo_sapiens
ENSCCAG00000017348	SAFB2	100	86.015	ENSAMEG00000012146	SAFB2	100	86.015	Ailuropoda_melanoleuca
ENSCCAG00000017348	SAFB2	100	98.111	ENSANAG00000031936	SAFB2	100	98.111	Aotus_nancymaae
ENSCCAG00000017348	SAFB2	100	84.454	ENSBTAG00000001790	SAFB2	99	84.722	Bos_taurus
ENSCCAG00000017348	SAFB2	100	88.377	ENSCAFG00000018814	SAFB2	100	88.272	Canis_familiaris
ENSCCAG00000017348	SAFB2	100	88.377	ENSCAFG00020018939	SAFB2	100	88.272	Canis_lupus_dingo
ENSCCAG00000017348	SAFB2	100	83.824	ENSCHIG00000024547	SAFB2	100	83.824	Capra_hircus
ENSCCAG00000017348	SAFB2	93	67.141	ENSCAPG00000011771	SAFB2	100	67.255	Cavia_aperea
ENSCCAG00000017348	SAFB2	100	78.791	ENSCPOG00000011394	SAFB2	100	78.791	Cavia_porcellus
ENSCCAG00000017348	SAFB2	100	95.238	ENSCATG00000039497	SAFB2	100	95.344	Cercocebus_atys
ENSCCAG00000017348	SAFB2	100	96.327	ENSCSAG00000009959	SAFB2	100	96.327	Chlorocebus_sabaeus
ENSCCAG00000017348	SAFB2	74	76.836	ENSCHOG00000010684	SAFB2	99	76.977	Choloepus_hoffmanni
ENSCCAG00000017348	SAFB2	100	95.238	ENSCANG00000024675	SAFB2	100	95.238	Colobus_angolensis_palliatus
ENSCCAG00000017348	SAFB2	100	69.819	ENSCGRG00001015833	Safb2	100	69.618	Cricetulus_griseus_chok1gshd
ENSCCAG00000017348	SAFB2	100	69.819	ENSCGRG00000011131	Safb2	100	69.618	Cricetulus_griseus_crigri
ENSCCAG00000017348	SAFB2	95	76.477	ENSDORG00000016199	Safb2	100	76.696	Dipodomys_ordii
ENSCCAG00000017348	SAFB2	87	83.636	ENSEASG00005022952	SAFB2	91	83.452	Equus_asinus_asinus
ENSCCAG00000017348	SAFB2	98	84.069	ENSECAG00000018978	SAFB2	100	83.610	Equus_caballus
ENSCCAG00000017348	SAFB2	100	87.212	ENSFCAG00000011834	SAFB2	100	87.107	Felis_catus
ENSCCAG00000017348	SAFB2	93	83.413	ENSFDAG00000020009	SAFB2	93	83.713	Fukomys_damarensis
ENSCCAG00000017348	SAFB2	100	92.075	ENSGGOG00000015093	SAFB2	100	91.345	Gorilla_gorilla
ENSCCAG00000017348	SAFB2	100	85.361	ENSHGLG00000017442	SAFB2	100	86.008	Heterocephalus_glaber_female
ENSCCAG00000017348	SAFB2	99	82.421	ENSLAFG00000003836	SAFB2	99	81.560	Loxodonta_africana
ENSCCAG00000017348	SAFB2	100	96.614	ENSMFAG00000039706	SAFB2	100	96.614	Macaca_fascicularis
ENSCCAG00000017348	SAFB2	100	96.720	ENSMMUG00000017968	SAFB2	100	96.720	Macaca_mulatta
ENSCCAG00000017348	SAFB2	100	90.387	ENSMNEG00000032042	SAFB2	100	90.114	Macaca_nemestrina
ENSCCAG00000017348	SAFB2	100	96.825	ENSMLEG00000034562	SAFB2	100	96.825	Mandrillus_leucophaeus
ENSCCAG00000017348	SAFB2	83	75.524	ENSMAUG00000011573	Safb2	94	75.763	Mesocricetus_auratus
ENSCCAG00000017348	SAFB2	100	90.795	ENSMICG00000008711	SAFB2	100	90.690	Microcebus_murinus
ENSCCAG00000017348	SAFB2	100	69.725	ENSMOCG00000006827	Safb2	100	69.379	Microtus_ochrogaster
ENSCCAG00000017348	SAFB2	98	72.593	ENSMODG00000001178	SAFB2	100	71.963	Monodelphis_domestica
ENSCCAG00000017348	SAFB2	100	69.223	MGP_CAROLIEiJ_G0021779	Safb2	100	69.024	Mus_caroli
ENSCCAG00000017348	SAFB2	100	69.591	ENSMUSG00000042625	Safb2	100	69.492	Mus_musculus
ENSCCAG00000017348	SAFB2	100	69.339	MGP_PahariEiJ_G0020768	Safb2	100	69.138	Mus_pahari
ENSCCAG00000017348	SAFB2	100	64.361	MGP_SPRETEiJ_G0022690	Safb2	100	62.487	Mus_spretus
ENSCCAG00000017348	SAFB2	100	86.988	ENSMPUG00000006106	SAFB2	93	86.988	Mustela_putorius_furo
ENSCCAG00000017348	SAFB2	100	82.640	ENSMLUG00000001050	SAFB2	100	81.081	Myotis_lucifugus
ENSCCAG00000017348	SAFB2	100	95.273	ENSNLEG00000013514	SAFB2	100	95.378	Nomascus_leucogenys
ENSCCAG00000017348	SAFB2	93	68.946	ENSMEUG00000002456	SAFB2	100	68.610	Notamacropus_eugenii
ENSCCAG00000017348	SAFB2	100	74.765	ENSOPRG00000011523	-	100	74.765	Ochotona_princeps
ENSCCAG00000017348	SAFB2	100	81.205	ENSODEG00000014751	SAFB2	100	81.205	Octodon_degus
ENSCCAG00000017348	SAFB2	100	89.749	ENSOGAG00000006855	SAFB2	100	88.935	Otolemur_garnettii
ENSCCAG00000017348	SAFB2	98	74.689	ENSOARG00000007982	SAFB2	67	84.976	Ovis_aries
ENSCCAG00000017348	SAFB2	100	96.747	ENSPPAG00000043392	SAFB2	100	96.747	Pan_paniscus
ENSCCAG00000017348	SAFB2	100	87.212	ENSPPRG00000011310	SAFB2	100	87.107	Panthera_pardus
ENSCCAG00000017348	SAFB2	82	88.406	ENSPTIG00000015120	SAFB2	91	88.406	Panthera_tigris_altaica
ENSCCAG00000017348	SAFB2	100	90.556	ENSPTRG00000010334	SAFB2	100	90.451	Pan_troglodytes
ENSCCAG00000017348	SAFB2	100	96.720	ENSPANG00000007004	SAFB2	100	96.720	Papio_anubis
ENSCCAG00000017348	SAFB2	100	67.832	ENSPEMG00000016015	Safb2	100	67.632	Peromyscus_maniculatus_bairdii
ENSCCAG00000017348	SAFB2	63	77.027	ENSPCIG00000009518	-	99	78.637	Phascolarctos_cinereus
ENSCCAG00000017348	SAFB2	100	96.747	ENSPPYG00000009427	SAFB2	100	96.747	Pongo_abelii
ENSCCAG00000017348	SAFB2	100	80.376	ENSPCAG00000006352	SAFB2	100	81.106	Procavia_capensis
ENSCCAG00000017348	SAFB2	100	87.500	ENSPCOG00000023260	SAFB2	100	85.849	Propithecus_coquereli
ENSCCAG00000017348	SAFB2	58	84.783	ENSPVAG00000004902	-	71	84.783	Pteropus_vampyrus
ENSCCAG00000017348	SAFB2	82	68.689	ENSRNOG00000049511	AABR07066522.1	100	66.748	Rattus_norvegicus
ENSCCAG00000017348	SAFB2	83	97.548	ENSRBIG00000033446	SAFB2	99	97.723	Rhinopithecus_bieti
ENSCCAG00000017348	SAFB2	100	96.720	ENSRROG00000006606	SAFB2	100	96.720	Rhinopithecus_roxellana
ENSCCAG00000017348	SAFB2	100	97.884	ENSSBOG00000032315	SAFB2	100	98.115	Saimiri_boliviensis_boliviensis
ENSCCAG00000017348	SAFB2	98	72.513	ENSSHAG00000012703	SAFB2	100	71.339	Sarcophilus_harrisii
ENSCCAG00000017348	SAFB2	81	72.552	ENSSARG00000000649	SAFB2	100	72.423	Sorex_araneus
ENSCCAG00000017348	SAFB2	100	88.168	ENSSSCG00000013523	SAFB2	100	87.644	Sus_scrofa
ENSCCAG00000017348	SAFB2	77	79.696	ENSTBEG00000012709	SAFB2	86	79.696	Tupaia_belangeri
ENSCCAG00000017348	SAFB2	93	80.899	ENSTTRG00000013585	SAFB2	93	80.674	Tursiops_truncatus
ENSCCAG00000017348	SAFB2	98	88.047	ENSUAMG00000024695	SAFB2	97	88.047	Ursus_americanus
ENSCCAG00000017348	SAFB2	86	86.477	ENSUMAG00000009585	SAFB2	90	86.477	Ursus_maritimus
ENSCCAG00000017348	SAFB2	74	89.062	ENSVPAG00000012041	SAFB2	89	89.062	Vicugna_pacos
ENSCCAG00000017348	SAFB2	100	88.377	ENSVVUG00000013695	SAFB2	100	88.272	Vulpes_vulpes