EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000017391 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal L1 domain-containing protein 1-like
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 1502 bases
Position: chrKV389596.1:2408153-2409654
Accession: 108315360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000003072	Ribosomal_L1	PF00687.21	4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000018738	-	1467	XM_017544644	ENSCCAP00000003072	488 (aa)	XP_017400133	A0A2K5PHH3

Gene Model

Click here to download ENSCCAG00000017391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000017391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000017391	-	98	84.265	ENSCCAG00000031641	-	96	84.058
ENSCCAG00000017391	-	100	76.220	ENSCCAG00000025197	-	85	92.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000017391	-	100	87.830	ENSG00000171490	RSL1D1	100	91.772	Homo_sapiens
ENSCCAG00000017391	-	94	66.379	ENSAMEG00000009570	RSL1D1	99	66.734	Ailuropoda_melanoleuca
ENSCCAG00000017391	-	72	40.857	ENSAOCG00000001548	rsl1d1	84	41.311	Amphiprion_ocellaris
ENSCCAG00000017391	-	72	40.857	ENSAPEG00000003334	rsl1d1	84	41.311	Amphiprion_percula
ENSCCAG00000017391	-	92	40.948	ENSAPLG00000004451	RSL1D1	99	39.040	Anas_platyrhynchos
ENSCCAG00000017391	-	100	89.139	ENSANAG00000028185	-	100	88.525	Aotus_nancymaae
ENSCCAG00000017391	-	99	88.391	ENSANAG00000026520	-	100	88.391	Aotus_nancymaae
ENSCCAG00000017391	-	100	95.325	ENSANAG00000034590	-	100	95.325	Aotus_nancymaae
ENSCCAG00000017391	-	55	44.444	ENSACLG00000017535	rsl1d1	86	40.678	Astatotilapia_calliptera
ENSCCAG00000017391	-	77	38.760	ENSAMXG00000008624	rsl1d1	89	38.889	Astyanax_mexicanus
ENSCCAG00000017391	-	100	63.636	ENSBTAG00000014588	RSL1D1	100	63.286	Bos_taurus
ENSCCAG00000017391	-	94	93.548	ENSCJAG00000008375	-	100	92.975	Callithrix_jacchus
ENSCCAG00000017391	-	94	93.763	ENSCJAG00000042606	-	100	92.073	Callithrix_jacchus
ENSCCAG00000017391	-	95	67.377	ENSCAFG00000018865	RSL1D1	100	66.126	Canis_familiaris
ENSCCAG00000017391	-	100	66.463	ENSCAFG00020024488	-	100	66.057	Canis_lupus_dingo
ENSCCAG00000017391	-	92	53.097	ENSCAFG00020002457	-	99	52.500	Canis_lupus_dingo
ENSCCAG00000017391	-	100	58.740	ENSCHIG00000009867	-	100	58.571	Capra_hircus
ENSCCAG00000017391	-	99	62.124	ENSCHIG00000018658	-	99	62.753	Capra_hircus
ENSCCAG00000017391	-	100	68.089	ENSTSYG00000009276	RSL1D1	100	67.886	Carlito_syrichta
ENSCCAG00000017391	-	99	62.602	ENSCPOG00000010630	RSL1D1	99	62.805	Cavia_porcellus
ENSCCAG00000017391	-	99	75.610	ENSCATG00000031153	RSL1D1	89	87.918	Cercocebus_atys
ENSCCAG00000017391	-	100	63.692	ENSCLAG00000010975	RSL1D1	100	64.097	Chinchilla_lanigera
ENSCCAG00000017391	-	100	85.396	ENSCSAG00000008255	RSL1D1	100	85.396	Chlorocebus_sabaeus
ENSCCAG00000017391	-	78	71.530	ENSCHOG00000010827	RSL1D1	75	72.963	Choloepus_hoffmanni
ENSCCAG00000017391	-	52	52.756	ENSCPBG00000004564	RSL1D1	92	55.072	Chrysemys_picta_bellii
ENSCCAG00000017391	-	50	32.653	ENSCSAVG00000011797	-	71	32.653	Ciona_savignyi
ENSCCAG00000017391	-	100	84.787	ENSCANG00000029202	RSL1D1	100	85.193	Colobus_angolensis_palliatus
ENSCCAG00000017391	-	95	53.503	ENSCGRG00001014989	Rsl1d1	99	52.352	Cricetulus_griseus_chok1gshd
ENSCCAG00000017391	-	95	53.503	ENSCGRG00000001905	Rsl1d1	99	52.352	Cricetulus_griseus_crigri
ENSCCAG00000017391	-	56	44.565	ENSCSEG00000019693	rsl1d1	65	47.303	Cynoglossus_semilaevis
ENSCCAG00000017391	-	55	48.162	ENSCVAG00000000672	rsl1d1	68	50.622	Cyprinodon_variegatus
ENSCCAG00000017391	-	57	43.262	ENSDARG00000055868	rsl1d1	68	44.269	Danio_rerio
ENSCCAG00000017391	-	99	62.500	ENSDNOG00000004601	-	98	62.903	Dasypus_novemcinctus
ENSCCAG00000017391	-	64	55.096	ENSDNOG00000047567	-	91	53.943	Dasypus_novemcinctus
ENSCCAG00000017391	-	99	61.943	ENSDNOG00000040779	-	99	62.348	Dasypus_novemcinctus
ENSCCAG00000017391	-	70	69.626	ENSDORG00000013432	-	80	69.626	Dipodomys_ordii
ENSCCAG00000017391	-	52	43.529	ENSEBUG00000005400	-	57	44.770	Eptatretus_burgeri
ENSCCAG00000017391	-	93	70.217	ENSEASG00005011499	RSL1D1	98	69.106	Equus_asinus_asinus
ENSCCAG00000017391	-	93	69.565	ENSECAG00000025036	RSL1D1	98	68.571	Equus_caballus
ENSCCAG00000017391	-	73	79.570	ENSEEUG00000015569	-	80	79.570	Erinaceus_europaeus
ENSCCAG00000017391	-	100	66.734	ENSFCAG00000010114	RSL1D1	100	68.219	Felis_catus
ENSCCAG00000017391	-	93	41.113	ENSFALG00000003869	RSL1D1	93	40.558	Ficedula_albicollis
ENSCCAG00000017391	-	100	59.959	ENSFDAG00000011414	RSL1D1	100	59.073	Fukomys_damarensis
ENSCCAG00000017391	-	52	45.660	ENSFHEG00000017235	rsl1d1	81	40.286	Fundulus_heteroclitus
ENSCCAG00000017391	-	53	47.692	ENSGMOG00000013048	rsl1d1	88	48.000	Gadus_morhua
ENSCCAG00000017391	-	95	40.000	ENSGALG00000033690	RSL1D1	99	40.169	Gallus_gallus
ENSCCAG00000017391	-	55	44.280	ENSGACG00000004483	rsl1d1	70	46.914	Gasterosteus_aculeatus
ENSCCAG00000017391	-	97	87.448	ENSGGOG00000013463	RSL1D1	100	87.018	Gorilla_gorilla
ENSCCAG00000017391	-	72	40.857	ENSHBUG00000001551	rsl1d1	85	40.563	Haplochromis_burtoni
ENSCCAG00000017391	-	100	60.692	ENSHGLG00000006774	RSL1D1	100	61.100	Heterocephalus_glaber_female
ENSCCAG00000017391	-	100	60.692	ENSHGLG00100017781	RSL1D1	100	61.100	Heterocephalus_glaber_male
ENSCCAG00000017391	-	85	38.462	ENSIPUG00000001677	rsl1d1	66	47.791	Ictalurus_punctatus
ENSCCAG00000017391	-	86	63.294	ENSSTOG00000015400	RSL1D1	99	61.647	Ictidomys_tridecemlineatus
ENSCCAG00000017391	-	92	54.881	ENSJJAG00000012115	Rsl1d1	99	55.158	Jaculus_jaculus
ENSCCAG00000017391	-	50	47.934	ENSKMAG00000021908	rsl1d1	67	47.934	Kryptolebias_marmoratus
ENSCCAG00000017391	-	51	46.559	ENSLBEG00000001076	rsl1d1	69	46.694	Labrus_bergylta
ENSCCAG00000017391	-	50	48.347	ENSLOCG00000007416	rsl1d1	58	48.347	Lepisosteus_oculatus
ENSCCAG00000017391	-	94	60.086	ENSLAFG00000013664	RSL1D1	96	58.621	Loxodonta_africana
ENSCCAG00000017391	-	97	86.402	ENSMFAG00000037288	RSL1D1	99	86.179	Macaca_fascicularis
ENSCCAG00000017391	-	97	86.402	ENSMMUG00000019632	RSL1D1	99	92.994	Macaca_mulatta
ENSCCAG00000017391	-	97	86.192	ENSMNEG00000044196	RSL1D1	99	85.976	Macaca_nemestrina
ENSCCAG00000017391	-	97	83.891	ENSMLEG00000042058	RSL1D1	99	85.163	Mandrillus_leucophaeus
ENSCCAG00000017391	-	51	46.988	ENSMAMG00000004385	rsl1d1	85	40.336	Mastacembelus_armatus
ENSCCAG00000017391	-	55	44.444	ENSMZEG00005007150	rsl1d1	86	40.395	Maylandia_zebra
ENSCCAG00000017391	-	93	39.915	ENSMGAG00000000863	RSL1D1	98	39.957	Meleagris_gallopavo
ENSCCAG00000017391	-	100	67.409	ENSMICG00000008229	RSL1D1	100	67.004	Microcebus_murinus
ENSCCAG00000017391	-	84	56.280	ENSMOCG00000017724	Rsl1d1	90	56.341	Microtus_ochrogaster
ENSCCAG00000017391	-	50	45.528	ENSMMOG00000003730	rsl1d1	79	46.218	Mola_mola
ENSCCAG00000017391	-	93	46.751	ENSMODG00000004625	-	100	45.666	Monodelphis_domestica
ENSCCAG00000017391	-	78	42.416	ENSMODG00000029494	-	79	42.159	Monodelphis_domestica
ENSCCAG00000017391	-	99	54.694	ENSMUSG00000005846	Rsl1d1	99	54.694	Mus_musculus
ENSCCAG00000017391	-	98	53.320	MGP_PahariEiJ_G0016164	Rsl1d1	99	52.990	Mus_pahari
ENSCCAG00000017391	-	99	54.898	MGP_SPRETEiJ_G0021352	Rsl1d1	99	54.898	Mus_spretus
ENSCCAG00000017391	-	95	65.895	ENSMPUG00000014548	RSL1D1	100	67.335	Mustela_putorius_furo
ENSCCAG00000017391	-	100	65.060	ENSMLUG00000000784	RSL1D1	100	65.060	Myotis_lucifugus
ENSCCAG00000017391	-	93	60.349	ENSNGAG00000013578	-	99	60.349	Nannospalax_galili
ENSCCAG00000017391	-	93	60.480	ENSNGAG00000009086	-	98	59.408	Nannospalax_galili
ENSCCAG00000017391	-	57	45.357	ENSNBRG00000002777	rsl1d1	85	41.429	Neolamprologus_brichardi
ENSCCAG00000017391	-	72	89.518	ENSNLEG00000012149	-	98	89.096	Nomascus_leucogenys
ENSCCAG00000017391	-	96	88.347	ENSNLEG00000010196	-	100	87.830	Nomascus_leucogenys
ENSCCAG00000017391	-	100	62.168	ENSOPRG00000004442	-	100	62.168	Ochotona_princeps
ENSCCAG00000017391	-	57	45.357	ENSONIG00000019757	rsl1d1	89	40.456	Oreochromis_niloticus
ENSCCAG00000017391	-	86	42.045	ENSOANG00000009408	-	99	40.774	Ornithorhynchus_anatinus
ENSCCAG00000017391	-	96	66.596	ENSOCUG00000004751	RSL1D1	100	64.213	Oryctolagus_cuniculus
ENSCCAG00000017391	-	56	42.857	ENSORLG00020006636	rsl1d1	68	46.186	Oryzias_latipes_hni
ENSCCAG00000017391	-	56	42.857	ENSORLG00015005427	rsl1d1	68	46.186	Oryzias_latipes_hsok
ENSCCAG00000017391	-	52	45.669	ENSOMEG00000008036	rsl1d1	65	47.881	Oryzias_melastigma
ENSCCAG00000017391	-	100	72.177	ENSOGAG00000015151	RSL1D1	100	72.177	Otolemur_garnettii
ENSCCAG00000017391	-	100	62.828	ENSOARG00000006923	RSL1D1	100	62.880	Ovis_aries
ENSCCAG00000017391	-	100	87.424	ENSPPAG00000039716	RSL1D1	100	87.424	Pan_paniscus
ENSCCAG00000017391	-	95	67.591	ENSPPRG00000005220	RSL1D1	100	67.951	Panthera_pardus
ENSCCAG00000017391	-	93	68.777	ENSPTIG00000005526	RSL1D1	94	68.559	Panthera_tigris_altaica
ENSCCAG00000017391	-	100	87.221	ENSPTRG00000007777	RSL1D1	100	87.221	Pan_troglodytes
ENSCCAG00000017391	-	92	86.842	ENSPANG00000023073	RSL1D1	99	85.976	Papio_anubis
ENSCCAG00000017391	-	52	44.922	ENSPKIG00000022687	rsl1d1	83	36.813	Paramormyrops_kingsleyae
ENSCCAG00000017391	-	82	40.876	ENSPSIG00000011642	RSL1D1	99	41.736	Pelodiscus_sinensis
ENSCCAG00000017391	-	50	48.571	ENSPMGG00000022261	rsl1d1	85	48.571	Periophthalmus_magnuspinnatus
ENSCCAG00000017391	-	97	53.347	ENSPEMG00000009523	Rsl1d1	98	53.347	Peromyscus_maniculatus_bairdii
ENSCCAG00000017391	-	79	47.716	ENSPCIG00000026851	-	87	48.082	Phascolarctos_cinereus
ENSCCAG00000017391	-	70	42.651	ENSPFOG00000005017	rsl1d1	92	42.075	Poecilia_formosa
ENSCCAG00000017391	-	58	44.840	ENSPLAG00000000482	rsl1d1	72	40.000	Poecilia_latipinna
ENSCCAG00000017391	-	52	47.826	ENSPREG00000016619	rsl1d1	76	40.462	Poecilia_reticulata
ENSCCAG00000017391	-	94	88.412	ENSPPYG00000007112	RSL1D1	100	87.830	Pongo_abelii
ENSCCAG00000017391	-	95	69.379	ENSPPYG00000019335	-	98	68.828	Pongo_abelii
ENSCCAG00000017391	-	82	66.667	ENSPCAG00000011264	-	83	66.667	Procavia_capensis
ENSCCAG00000017391	-	79	67.876	ENSPCOG00000022456	RSL1D1	100	68.135	Propithecus_coquereli
ENSCCAG00000017391	-	100	65.644	ENSPVAG00000005014	RSL1D1	100	64.826	Pteropus_vampyrus
ENSCCAG00000017391	-	56	44.853	ENSPNYG00000002850	rsl1d1	85	40.730	Pundamilia_nyererei
ENSCCAG00000017391	-	81	37.879	ENSPNAG00000011848	rsl1d1	89	38.211	Pygocentrus_nattereri
ENSCCAG00000017391	-	73	47.123	ENSRNOG00000032439	Rsl1d1	55	46.575	Rattus_norvegicus
ENSCCAG00000017391	-	95	55.485	ENSRNOG00000061236	LOC108348298	99	53.629	Rattus_norvegicus
ENSCCAG00000017391	-	95	55.485	ENSRNOG00000048608	Rsl1d1l1	99	53.629	Rattus_norvegicus
ENSCCAG00000017391	-	100	85.396	ENSRBIG00000030317	RSL1D1	100	85.396	Rhinopithecus_bieti
ENSCCAG00000017391	-	100	85.396	ENSRROG00000033658	RSL1D1	100	85.396	Rhinopithecus_roxellana
ENSCCAG00000017391	-	100	88.438	ENSSBOG00000028384	-	100	88.032	Saimiri_boliviensis_boliviensis
ENSCCAG00000017391	-	100	73.577	ENSSBOG00000029329	-	100	71.951	Saimiri_boliviensis_boliviensis
ENSCCAG00000017391	-	100	95.122	ENSSBOG00000035910	-	100	95.122	Saimiri_boliviensis_boliviensis
ENSCCAG00000017391	-	51	44.664	ENSSMAG00000007957	rsl1d1	90	36.533	Scophthalmus_maximus
ENSCCAG00000017391	-	94	41.458	ENSSPUG00000007525	RSL1D1	98	41.250	Sphenodon_punctatus
ENSCCAG00000017391	-	94	62.683	ENSSSCG00000023984	RSL1D1	100	62.055	Sus_scrofa
ENSCCAG00000017391	-	50	53.659	ENSTGUG00000005174	RSL1D1	100	53.659	Taeniopygia_guttata
ENSCCAG00000017391	-	52	48.438	ENSTRUG00000016970	rsl1d1	72	48.031	Takifugu_rubripes
ENSCCAG00000017391	-	83	59.806	ENSTBEG00000014678	RSL1D1	100	58.111	Tupaia_belangeri
ENSCCAG00000017391	-	94	62.635	ENSTTRG00000011629	RSL1D1	100	61.382	Tursiops_truncatus
ENSCCAG00000017391	-	94	67.026	ENSUAMG00000004470	RSL1D1	100	67.140	Ursus_americanus
ENSCCAG00000017391	-	86	62.009	ENSUMAG00000003994	RSL1D1	100	62.882	Ursus_maritimus
ENSCCAG00000017391	-	94	57.543	ENSVVUG00000024962	-	97	56.048	Vulpes_vulpes
ENSCCAG00000017391	-	95	68.230	ENSVVUG00000018170	-	100	67.140	Vulpes_vulpes
ENSCCAG00000017391	-	71	48.000	ENSXETG00000033365	-	97	42.531	Xenopus_tropicalis
ENSCCAG00000017391	-	52	45.669	ENSXMAG00000025111	rsl1d1	73	45.669	Xiphophorus_maculatus