EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000018127 (Gene tree)
Gene ID: 108303674
Gene Symbol: -
Alias: -
Full Name: survival of motor neuron 1%2C telomeric
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 40295 bases
Position: chrKV389476.1:996277-1036571
Accession: 108303674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000003424	SMN	PF06003.12	7.2e-104	1	1
ENSCCAP00000003432	SMN	PF06003.12	7.2e-104	1	1
ENSCCAP00000003438	SMN	PF06003.12	8.6e-93	1	2
ENSCCAP00000003438	SMN	PF06003.12	8.6e-93	2	2
ENSCCAP00000003447	SMN	PF06003.12	4.3e-57	1	2
ENSCCAP00000003447	SMN	PF06003.12	4.3e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000019737	-	1640	XM_017527591	ENSCCAP00000003432	293 (aa)	XP_017383080	A0A2K5PIG0
ENSCCAT00000019747	-	1547	XM_017527592	ENSCCAP00000003438	262 (aa)	XP_017383081	A0A2K5PIG3
ENSCCAT00000019722	-	3262	XM_017527590	ENSCCAP00000003424	293 (aa)	XP_017383079	A0A2K5PIG0
ENSCCAT00000019783	-	681	-	ENSCCAP00000003447	226 (aa)	-	A0A2K5PIK5

Gene Model

Click here to download ENSCCAG00000018127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000018127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000018127	-	100	94.656	ENSG00000205571	SMN2	98	97.778	Homo_sapiens
ENSCCAG00000018127	-	100	94.656	ENSG00000172062	SMN1	100	94.656	Homo_sapiens
ENSCCAG00000018127	-	91	49.275	ENSAPOG00000011324	smn1	94	50.185	Acanthochromis_polyacanthus
ENSCCAG00000018127	-	94	88.750	ENSAMEG00000003316	-	93	87.143	Ailuropoda_melanoleuca
ENSCCAG00000018127	-	88	46.970	ENSACIG00000019772	-	97	48.462	Amphilophus_citrinellus
ENSCCAG00000018127	-	91	50.000	ENSAOCG00000024444	smn1	94	51.292	Amphiprion_ocellaris
ENSCCAG00000018127	-	91	50.373	ENSAPEG00000016504	smn1	94	54.152	Amphiprion_percula
ENSCCAG00000018127	-	88	50.558	ENSATEG00000002182	smn1	83	47.636	Anabas_testudineus
ENSCCAG00000018127	-	68	55.276	ENSAPLG00000010912	-	97	55.224	Anas_platyrhynchos
ENSCCAG00000018127	-	84	81.633	ENSACAG00000010017	-	95	57.836	Anolis_carolinensis
ENSCCAG00000018127	-	100	95.946	ENSANAG00000032133	-	100	95.946	Aotus_nancymaae
ENSCCAG00000018127	-	91	52.158	ENSACLG00000007308	smn1	88	51.737	Astatotilapia_calliptera
ENSCCAG00000018127	-	54	57.746	ENSAMXG00000013884	smn1	97	47.794	Astyanax_mexicanus
ENSCCAG00000018127	-	95	82.500	ENSBTAG00000005743	SMN2	97	82.500	Bos_taurus
ENSCCAG00000018127	-	83	34.685	WBGene00004887	smn-1	94	33.333	Caenorhabditis_elegans
ENSCCAG00000018127	-	100	98.473	ENSCJAG00000016290	-	100	98.901	Callithrix_jacchus
ENSCCAG00000018127	-	95	86.071	ENSCAFG00000007812	SMN	97	86.071	Canis_familiaris
ENSCCAG00000018127	-	95	86.071	ENSCAFG00020019229	-	90	86.071	Canis_lupus_dingo
ENSCCAG00000018127	-	95	82.624	ENSCHIG00000015559	-	95	81.915	Capra_hircus
ENSCCAG00000018127	-	99	88.462	ENSTSYG00000012058	-	96	92.500	Carlito_syrichta
ENSCCAG00000018127	-	74	69.725	ENSCAPG00000011021	-	96	70.183	Cavia_aperea
ENSCCAG00000018127	-	98	80.339	ENSCPOG00000012328	-	96	80.769	Cavia_porcellus
ENSCCAG00000018127	-	99	81.164	ENSCPOG00000036973	-	99	80.822	Cavia_porcellus
ENSCCAG00000018127	-	100	95.604	ENSCATG00000037002	-	100	95.604	Cercocebus_atys
ENSCCAG00000018127	-	99	80.755	ENSCLAG00000000284	-	99	80.755	Chinchilla_lanigera
ENSCCAG00000018127	-	100	95.604	ENSCSAG00000015688	-	100	92.857	Chlorocebus_sabaeus
ENSCCAG00000018127	-	81	84.375	ENSCHOG00000007346	-	100	73.016	Choloepus_hoffmanni
ENSCCAG00000018127	-	97	61.512	ENSCPBG00000010968	-	99	62.082	Chrysemys_picta_bellii
ENSCCAG00000018127	-	100	95.604	ENSCANG00000038242	-	100	95.604	Colobus_angolensis_palliatus
ENSCCAG00000018127	-	100	86.692	ENSCANG00000033324	-	100	83.206	Colobus_angolensis_palliatus
ENSCCAG00000018127	-	99	82.131	ENSCGRG00001017959	-	97	82.857	Cricetulus_griseus_chok1gshd
ENSCCAG00000018127	-	99	62.887	ENSCGRG00001016998	-	96	60.000	Cricetulus_griseus_chok1gshd
ENSCCAG00000018127	-	99	82.131	ENSCGRG00000007698	Smn1	97	82.857	Cricetulus_griseus_crigri
ENSCCAG00000018127	-	92	49.650	ENSCSEG00000015227	smn1	97	44.245	Cynoglossus_semilaevis
ENSCCAG00000018127	-	92	47.751	ENSCVAG00000007498	smn1	94	52.747	Cyprinodon_variegatus
ENSCCAG00000018127	-	93	52.650	ENSDARG00000018494	smn1	95	48.708	Danio_rerio
ENSCCAG00000018127	-	77	71.642	ENSDNOG00000045949	-	86	70.588	Dasypus_novemcinctus
ENSCCAG00000018127	-	82	83.750	ENSDNOG00000007283	-	99	83.750	Dasypus_novemcinctus
ENSCCAG00000018127	-	99	80.714	ENSDORG00000007082	Smn1	99	76.897	Dipodomys_ordii
ENSCCAG00000018127	-	80	69.048	ENSETEG00000001406	-	89	69.022	Echinops_telfairi
ENSCCAG00000018127	-	92	40.210	ENSEBUG00000011902	smn1	92	39.259	Eptatretus_burgeri
ENSCCAG00000018127	-	95	73.498	ENSEASG00005018000	-	89	79.134	Equus_asinus_asinus
ENSCCAG00000018127	-	93	88.608	ENSECAG00000015215	-	96	84.643	Equus_caballus
ENSCCAG00000018127	-	81	87.500	ENSEEUG00000015777	-	100	80.080	Erinaceus_europaeus
ENSCCAG00000018127	-	91	53.047	ENSELUG00000018067	smn1	94	46.816	Esox_lucius
ENSCCAG00000018127	-	99	87.054	ENSFCAG00000028292	SMN	96	90.000	Felis_catus
ENSCCAG00000018127	-	89	58.935	ENSFALG00000012320	-	91	58.935	Ficedula_albicollis
ENSCCAG00000018127	-	99	77.703	ENSFDAG00000017683	-	99	78.716	Fukomys_damarensis
ENSCCAG00000018127	-	91	50.186	ENSFHEG00000018508	smn1	96	50.562	Fundulus_heteroclitus
ENSCCAG00000018127	-	95	46.763	ENSGMOG00000017279	smn1	93	47.970	Gadus_morhua
ENSCCAG00000018127	-	91	58.672	ENSGALG00000002430	SMN	95	56.827	Gallus_gallus
ENSCCAG00000018127	-	90	56.198	ENSGAFG00000009501	smn1	93	56.432	Gambusia_affinis
ENSCCAG00000018127	-	91	51.648	ENSGACG00000010584	smn1	91	52.107	Gasterosteus_aculeatus
ENSCCAG00000018127	-	96	62.500	ENSGAGG00000011374	-	97	61.786	Gopherus_agassizii
ENSCCAG00000018127	-	94	37.441	ENSGAGG00000013639	-	90	38.168	Gopherus_agassizii
ENSCCAG00000018127	-	97	91.797	ENSGGOG00000003872	-	100	94.309	Gorilla_gorilla
ENSCCAG00000018127	-	100	80.916	ENSGGOG00000026704	-	91	93.299	Gorilla_gorilla
ENSCCAG00000018127	-	91	52.060	ENSHBUG00000013987	smn1	94	51.685	Haplochromis_burtoni
ENSCCAG00000018127	-	99	77.663	ENSHGLG00000001905	-	99	77.663	Heterocephalus_glaber_female
ENSCCAG00000018127	-	99	78.716	ENSHGLG00000001018	-	96	80.000	Heterocephalus_glaber_female
ENSCCAG00000018127	-	99	78.716	ENSHGLG00100011252	-	96	80.000	Heterocephalus_glaber_male
ENSCCAG00000018127	-	96	77.224	ENSHGLG00100018676	-	100	77.224	Heterocephalus_glaber_male
ENSCCAG00000018127	-	86	80.851	ENSHCOG00000017136	smn1	87	48.047	Hippocampus_comes
ENSCCAG00000018127	-	91	51.685	ENSIPUG00000012580	smn1	83	49.248	Ictalurus_punctatus
ENSCCAG00000018127	-	95	86.331	ENSSTOG00000012288	-	100	86.331	Ictidomys_tridecemlineatus
ENSCCAG00000018127	-	66	60.345	ENSJJAG00000014853	-	89	63.429	Jaculus_jaculus
ENSCCAG00000018127	-	91	52.727	ENSKMAG00000007239	smn1	96	49.808	Kryptolebias_marmoratus
ENSCCAG00000018127	-	91	48.736	ENSLBEG00000022550	smn1	94	47.232	Labrus_bergylta
ENSCCAG00000018127	-	91	35.842	ENSLACG00000009808	-	90	36.131	Latimeria_chalumnae
ENSCCAG00000018127	-	90	56.098	ENSLOCG00000011339	smn1	93	56.379	Lepisosteus_oculatus
ENSCCAG00000018127	-	99	86.813	ENSLAFG00000003425	-	99	80.142	Loxodonta_africana
ENSCCAG00000018127	-	100	96.703	ENSMFAG00000031523	SMN1	100	96.703	Macaca_fascicularis
ENSCCAG00000018127	-	100	88.776	ENSMFAG00000008812	-	100	88.776	Macaca_fascicularis
ENSCCAG00000018127	-	100	88.095	ENSMMUG00000030594	-	100	88.095	Macaca_mulatta
ENSCCAG00000018127	-	100	96.703	ENSMMUG00000020214	SMN1	100	96.703	Macaca_mulatta
ENSCCAG00000018127	-	76	79.821	ENSMNEG00000036423	-	87	79.821	Macaca_nemestrina
ENSCCAG00000018127	-	100	96.703	ENSMNEG00000035094	-	100	96.703	Macaca_nemestrina
ENSCCAG00000018127	-	100	95.604	ENSMLEG00000041902	-	100	95.604	Mandrillus_leucophaeus
ENSCCAG00000018127	-	91	52.747	ENSMAMG00000011034	smn1	58	59.763	Mastacembelus_armatus
ENSCCAG00000018127	-	90	53.383	ENSMZEG00005013634	smn1	94	52.809	Maylandia_zebra
ENSCCAG00000018127	-	67	53.535	ENSMGAG00000008889	-	95	48.128	Meleagris_gallopavo
ENSCCAG00000018127	-	99	81.100	ENSMAUG00000010262	Smn1	96	82.374	Mesocricetus_auratus
ENSCCAG00000018127	-	99	87.912	ENSMICG00000034708	-	99	87.912	Microcebus_murinus
ENSCCAG00000018127	-	99	80.069	ENSMOCG00000017833	Smn1	97	80.714	Microtus_ochrogaster
ENSCCAG00000018127	-	92	52.788	ENSMMOG00000005504	smn1	93	52.191	Mola_mola
ENSCCAG00000018127	-	96	68.421	ENSMODG00000001436	-	95	69.258	Monodelphis_domestica
ENSCCAG00000018127	-	91	50.360	ENSMALG00000008025	smn1	94	45.693	Monopterus_albus
ENSCCAG00000018127	-	99	79.795	MGP_CAROLIEiJ_G0018836	Smn1	96	81.004	Mus_caroli
ENSCCAG00000018127	-	99	79.795	ENSMUSG00000021645	Smn1	96	81.004	Mus_musculus
ENSCCAG00000018127	-	99	76.632	MGP_PahariEiJ_G0015911	Smn1	96	78.417	Mus_pahari
ENSCCAG00000018127	-	99	79.110	MGP_SPRETEiJ_G0019718	Smn1	96	80.287	Mus_spretus
ENSCCAG00000018127	-	95	87.097	ENSMPUG00000014470	-	95	88.060	Mustela_putorius_furo
ENSCCAG00000018127	-	94	88.750	ENSMLUG00000010603	-	92	84.669	Myotis_lucifugus
ENSCCAG00000018127	-	99	81.443	ENSNGAG00000019833	Smn1	97	82.500	Nannospalax_galili
ENSCCAG00000018127	-	91	53.929	ENSNBRG00000023000	smn1	94	51.852	Neolamprologus_brichardi
ENSCCAG00000018127	-	100	94.656	ENSNLEG00000004454	-	100	94.656	Nomascus_leucogenys
ENSCCAG00000018127	-	77	62.555	ENSMEUG00000011393	-	99	64.035	Notamacropus_eugenii
ENSCCAG00000018127	-	85	79.447	ENSOPRG00000002015	-	100	80.237	Ochotona_princeps
ENSCCAG00000018127	-	95	80.212	ENSODEG00000015976	-	97	80.212	Octodon_degus
ENSCCAG00000018127	-	92	52.030	ENSONIG00000011799	smn1	95	51.471	Oreochromis_niloticus
ENSCCAG00000018127	-	77	90.698	ENSOANG00000001626	-	95	65.809	Ornithorhynchus_anatinus
ENSCCAG00000018127	-	99	79.310	ENSOCUG00000025183	-	96	76.056	Oryctolagus_cuniculus
ENSCCAG00000018127	-	94	88.406	ENSOCUG00000026649	-	97	80.208	Oryctolagus_cuniculus
ENSCCAG00000018127	-	99	81.443	ENSOCUG00000017097	-	99	81.443	Oryctolagus_cuniculus
ENSCCAG00000018127	-	60	60.127	ENSORLG00000010552	smn1	94	49.630	Oryzias_latipes
ENSCCAG00000018127	-	91	52.985	ENSORLG00020007936	smn1	93	54.878	Oryzias_latipes_hni
ENSCCAG00000018127	-	91	49.265	ENSORLG00015022425	smn1	94	46.667	Oryzias_latipes_hsok
ENSCCAG00000018127	-	58	61.589	ENSOMEG00000007824	smn1	54	61.146	Oryzias_melastigma
ENSCCAG00000018127	-	91	77.491	ENSOGAG00000031414	-	94	77.122	Otolemur_garnettii
ENSCCAG00000018127	-	93	80.586	ENSOARG00000005425	-	99	80.586	Ovis_aries
ENSCCAG00000018127	-	100	94.275	ENSPPAG00000036640	-	100	94.505	Pan_paniscus
ENSCCAG00000018127	-	99	87.500	ENSPPRG00000005575	-	96	90.000	Panthera_pardus
ENSCCAG00000018127	-	99	87.556	ENSPTIG00000007745	-	96	90.000	Panthera_tigris_altaica
ENSCCAG00000018127	-	100	94.656	ENSPTRG00000016955	-	100	94.656	Pan_troglodytes
ENSCCAG00000018127	-	98	88.194	ENSPANG00000000253	-	98	88.194	Papio_anubis
ENSCCAG00000018127	-	100	95.604	ENSPANG00000013601	-	100	95.604	Papio_anubis
ENSCCAG00000018127	-	70	91.892	ENSPKIG00000011096	smn1	93	54.918	Paramormyrops_kingsleyae
ENSCCAG00000018127	-	92	57.951	ENSPSIG00000014787	-	90	56.827	Pelodiscus_sinensis
ENSCCAG00000018127	-	91	50.000	ENSPMGG00000012285	smn1	94	50.193	Periophthalmus_magnuspinnatus
ENSCCAG00000018127	-	89	41.948	ENSPMAG00000005004	smn1	52	44.586	Petromyzon_marinus
ENSCCAG00000018127	-	87	83.333	ENSPCIG00000025764	-	97	68.794	Phascolarctos_cinereus
ENSCCAG00000018127	-	91	53.650	ENSPFOG00000007786	smn1	94	50.187	Poecilia_formosa
ENSCCAG00000018127	-	90	56.612	ENSPLAG00000012071	smn1	93	58.091	Poecilia_latipinna
ENSCCAG00000018127	-	90	56.198	ENSPMEG00000017085	smn1	93	57.676	Poecilia_mexicana
ENSCCAG00000018127	-	90	57.851	ENSPREG00000005824	smn1	93	58.091	Poecilia_reticulata
ENSCCAG00000018127	-	91	91.822	ENSPPYG00000015533	-	97	91.822	Pongo_abelii
ENSCCAG00000018127	-	83	62.385	ENSPPYG00000019189	-	99	62.844	Pongo_abelii
ENSCCAG00000018127	-	87	84.375	ENSPCAG00000004187	-	99	79.182	Procavia_capensis
ENSCCAG00000018127	-	87	73.684	ENSPCOG00000022307	-	99	75.877	Propithecus_coquereli
ENSCCAG00000018127	-	99	86.254	ENSPVAG00000005977	-	99	86.254	Pteropus_vampyrus
ENSCCAG00000018127	-	91	53.929	ENSPNYG00000014148	smn1	94	51.852	Pundamilia_nyererei
ENSCCAG00000018127	-	91	50.000	ENSPNAG00000014007	smn1	82	50.182	Pygocentrus_nattereri
ENSCCAG00000018127	-	99	78.767	ENSRNOG00000018067	Smn1	96	79.928	Rattus_norvegicus
ENSCCAG00000018127	-	100	95.604	ENSRBIG00000037052	-	100	95.604	Rhinopithecus_bieti
ENSCCAG00000018127	-	93	90.110	ENSRBIG00000036775	-	95	79.211	Rhinopithecus_bieti
ENSCCAG00000018127	-	100	80.292	ENSRROG00000031088	-	100	77.551	Rhinopithecus_roxellana
ENSCCAG00000018127	-	100	95.604	ENSRROG00000039399	-	100	95.604	Rhinopithecus_roxellana
ENSCCAG00000018127	-	100	97.788	ENSSBOG00000011665	-	100	97.802	Saimiri_boliviensis_boliviensis
ENSCCAG00000018127	-	83	91.600	ENSSBOG00000020112	-	87	89.600	Saimiri_boliviensis_boliviensis
ENSCCAG00000018127	-	99	67.123	ENSSHAG00000001499	-	96	69.403	Sarcophilus_harrisii
ENSCCAG00000018127	-	90	53.659	ENSSFOG00015015507	smn1	94	53.659	Scleropages_formosus
ENSCCAG00000018127	-	91	47.619	ENSSMAG00000007922	smn1	94	47.970	Scophthalmus_maximus
ENSCCAG00000018127	-	91	49.097	ENSSDUG00000018533	smn1	94	49.265	Seriola_dumerili
ENSCCAG00000018127	-	91	49.458	ENSSLDG00000021135	smn1	94	49.632	Seriola_lalandi_dorsalis
ENSCCAG00000018127	-	91	61.852	ENSSPUG00000000373	-	93	62.454	Sphenodon_punctatus
ENSCCAG00000018127	-	90	52.326	ENSSPAG00000004345	smn1	94	52.569	Stegastes_partitus
ENSCCAG00000018127	-	72	55.660	ENSSSCG00000033865	-	94	58.549	Sus_scrofa
ENSCCAG00000018127	-	99	86.254	ENSSSCG00000016970	-	99	86.254	Sus_scrofa
ENSCCAG00000018127	-	97	64.567	ENSSSCG00000029127	-	96	64.919	Sus_scrofa
ENSCCAG00000018127	-	94	56.940	ENSTGUG00000001548	-	96	54.380	Taeniopygia_guttata
ENSCCAG00000018127	-	92	47.955	ENSTRUG00000000736	smn	95	48.551	Takifugu_rubripes
ENSCCAG00000018127	-	92	47.312	ENSTNIG00000009892	smn1	95	44.485	Tetraodon_nigroviridis
ENSCCAG00000018127	-	70	86.957	ENSTBEG00000002399	-	89	86.957	Tupaia_belangeri
ENSCCAG00000018127	-	94	86.250	ENSTTRG00000005080	-	95	83.214	Tursiops_truncatus
ENSCCAG00000018127	-	70	86.957	ENSUAMG00000024947	-	67	86.957	Ursus_americanus
ENSCCAG00000018127	-	94	90.000	ENSUMAG00000007842	-	72	87.857	Ursus_maritimus
ENSCCAG00000018127	-	88	88.750	ENSVPAG00000009887	-	96	73.684	Vicugna_pacos
ENSCCAG00000018127	-	95	86.071	ENSVVUG00000006934	-	97	86.071	Vulpes_vulpes
ENSCCAG00000018127	-	90	65.854	ENSXETG00000018189	smn2	95	53.147	Xenopus_tropicalis
ENSCCAG00000018127	-	90	38.516	ENSXETG00000004912	-	78	60.656	Xenopus_tropicalis
ENSCCAG00000018127	-	91	56.557	ENSXMAG00000001521	smn1	95	56.557	Xiphophorus_maculatus