EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000018168 (Gene tree)
Gene ID: 108309829
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 76026 bases
Position: chrKV389523.1:5263658-5339683
Accession: 108309829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000003373	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSCCAP00000003358	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSCCAP00000003358	RRM_1	PF00076.22	9.7e-40	1	3
ENSCCAP00000003358	RRM_1	PF00076.22	9.7e-40	2	3
ENSCCAP00000003358	RRM_1	PF00076.22	9.7e-40	3	3
ENSCCAP00000003373	RRM_1	PF00076.22	1.1e-39	1	3
ENSCCAP00000003373	RRM_1	PF00076.22	1.1e-39	2	3
ENSCCAP00000003373	RRM_1	PF00076.22	1.1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000019614	A1CF-202	5150	XM_017536388	ENSCCAP00000003373	599 (aa)	XP_017391877	A0A2K5PI99
ENSCCAT00000019584	A1CF-201	4571	XM_017536385	ENSCCAP00000003358	593 (aa)	XP_017391874	A0A2K5PI84

Gene Model

Click here to download ENSCCAG00000018168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000018168's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000018168	A1CF	68	55.082	ENSCCAG00000001323	-	82	55.082
ENSCCAG00000018168	A1CF	53	52.215	ENSCCAG00000023435	-	53	52.215
ENSCCAG00000018168	A1CF	76	40.385	ENSCCAG00000024397	-	75	40.909
ENSCCAG00000018168	A1CF	50	41.391	ENSCCAG00000017947	-	57	41.391
ENSCCAG00000018168	A1CF	69	70.701	ENSCCAG00000027619	-	88	70.701
ENSCCAG00000018168	A1CF	52	52.427	ENSCCAG00000022117	SYNCRIP	79	42.558
ENSCCAG00000018168	A1CF	75	58.681	ENSCCAG00000030129	-	87	68.300

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000018168	A1CF	100	98.151	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSCCAG00000018168	A1CF	100	73.544	ENSAPOG00000008259	a1cf	100	73.544	Acanthochromis_polyacanthus
ENSCCAG00000018168	A1CF	100	95.953	ENSAMEG00000000523	A1CF	100	95.953	Ailuropoda_melanoleuca
ENSCCAG00000018168	A1CF	100	75.204	ENSACIG00000008632	a1cf	100	76.672	Amphilophus_citrinellus
ENSCCAG00000018168	A1CF	100	74.220	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSCCAG00000018168	A1CF	100	75.205	ENSAPEG00000009537	a1cf	100	76.026	Amphiprion_percula
ENSCCAG00000018168	A1CF	100	76.059	ENSATEG00000013720	a1cf	100	77.362	Anabas_testudineus
ENSCCAG00000018168	A1CF	100	89.394	ENSAPLG00000002964	A1CF	100	89.394	Anas_platyrhynchos
ENSCCAG00000018168	A1CF	100	83.838	ENSACAG00000015269	A1CF	100	83.838	Anolis_carolinensis
ENSCCAG00000018168	A1CF	100	98.671	ENSANAG00000019974	A1CF	100	98.671	Aotus_nancymaae
ENSCCAG00000018168	A1CF	100	73.115	ENSACLG00000017428	a1cf	100	75.410	Astatotilapia_calliptera
ENSCCAG00000018168	A1CF	100	74.711	ENSAMXG00000018180	a1cf	100	74.876	Astyanax_mexicanus
ENSCCAG00000018168	A1CF	100	93.950	ENSBTAG00000021195	A1CF	100	94.872	Bos_taurus
ENSCCAG00000018168	A1CF	100	99.663	ENSCJAG00000005045	A1CF	100	99.663	Callithrix_jacchus
ENSCCAG00000018168	A1CF	100	96.121	ENSCAFG00000015581	A1CF	100	96.121	Canis_familiaris
ENSCCAG00000018168	A1CF	100	96.121	ENSCAFG00020026421	A1CF	100	96.121	Canis_lupus_dingo
ENSCCAG00000018168	A1CF	100	94.790	ENSCHIG00000020411	A1CF	100	95.126	Capra_hircus
ENSCCAG00000018168	A1CF	100	93.322	ENSTSYG00000001755	A1CF	100	96.250	Carlito_syrichta
ENSCCAG00000018168	A1CF	100	83.436	ENSCAPG00000017386	A1CF	90	95.142	Cavia_aperea
ENSCCAG00000018168	A1CF	100	96.970	ENSCPOG00000009807	A1CF	100	96.970	Cavia_porcellus
ENSCCAG00000018168	A1CF	100	97.302	ENSCATG00000043715	A1CF	100	97.302	Cercocebus_atys
ENSCCAG00000018168	A1CF	100	95.973	ENSCLAG00000010424	A1CF	100	95.973	Chinchilla_lanigera
ENSCCAG00000018168	A1CF	100	98.482	ENSCSAG00000007032	A1CF	100	98.482	Chlorocebus_sabaeus
ENSCCAG00000018168	A1CF	99	91.167	ENSCHOG00000009089	A1CF	99	91.348	Choloepus_hoffmanni
ENSCCAG00000018168	A1CF	100	89.226	ENSCPBG00000026464	A1CF	100	89.226	Chrysemys_picta_bellii
ENSCCAG00000018168	A1CF	100	98.482	ENSCANG00000038032	A1CF	100	98.482	Colobus_angolensis_palliatus
ENSCCAG00000018168	A1CF	100	94.286	ENSCGRG00001017413	A1cf	100	94.790	Cricetulus_griseus_chok1gshd
ENSCCAG00000018168	A1CF	100	93.613	ENSCGRG00000017332	A1cf	100	94.286	Cricetulus_griseus_crigri
ENSCCAG00000018168	A1CF	100	74.959	ENSCSEG00000002361	a1cf	100	76.080	Cynoglossus_semilaevis
ENSCCAG00000018168	A1CF	100	74.919	ENSCVAG00000010520	a1cf	100	76.384	Cyprinodon_variegatus
ENSCCAG00000018168	A1CF	100	78.297	ENSDARG00000002968	a1cf	100	79.633	Danio_rerio
ENSCCAG00000018168	A1CF	100	95.294	ENSDNOG00000002829	A1CF	100	95.294	Dasypus_novemcinctus
ENSCCAG00000018168	A1CF	81	93.116	ENSETEG00000012527	A1CF	81	93.116	Echinops_telfairi
ENSCCAG00000018168	A1CF	100	97.152	ENSEASG00005012924	A1CF	100	97.152	Equus_asinus_asinus
ENSCCAG00000018168	A1CF	100	96.650	ENSECAG00000010424	A1CF	100	96.650	Equus_caballus
ENSCCAG00000018168	A1CF	78	80.687	ENSEEUG00000000013	A1CF	100	80.687	Erinaceus_europaeus
ENSCCAG00000018168	A1CF	100	79.299	ENSELUG00000003159	a1cf	100	80.134	Esox_lucius
ENSCCAG00000018168	A1CF	100	93.592	ENSFCAG00000011179	A1CF	100	93.761	Felis_catus
ENSCCAG00000018168	A1CF	100	86.364	ENSFALG00000013183	A1CF	100	86.364	Ficedula_albicollis
ENSCCAG00000018168	A1CF	100	94.286	ENSFDAG00000019371	A1CF	100	94.286	Fukomys_damarensis
ENSCCAG00000018168	A1CF	100	70.195	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSCCAG00000018168	A1CF	100	72.231	ENSGMOG00000018943	a1cf	100	72.231	Gadus_morhua
ENSCCAG00000018168	A1CF	95	88.455	ENSGALG00000003765	A1CF	97	88.455	Gallus_gallus
ENSCCAG00000018168	A1CF	100	70.230	ENSGAFG00000014868	a1cf	100	71.217	Gambusia_affinis
ENSCCAG00000018168	A1CF	100	74.178	ENSGACG00000010241	a1cf	100	74.671	Gasterosteus_aculeatus
ENSCCAG00000018168	A1CF	94	88.770	ENSGAGG00000016508	A1CF	98	88.339	Gopherus_agassizii
ENSCCAG00000018168	A1CF	100	98.319	ENSGGOG00000009670	A1CF	100	98.319	Gorilla_gorilla
ENSCCAG00000018168	A1CF	100	74.225	ENSHBUG00000021959	a1cf	100	76.346	Haplochromis_burtoni
ENSCCAG00000018168	A1CF	100	96.134	ENSHGLG00000008955	A1CF	100	96.134	Heterocephalus_glaber_female
ENSCCAG00000018168	A1CF	100	95.462	ENSHGLG00100000518	A1CF	100	95.462	Heterocephalus_glaber_male
ENSCCAG00000018168	A1CF	100	70.098	ENSHCOG00000017669	a1cf	100	72.920	Hippocampus_comes
ENSCCAG00000018168	A1CF	89	83.209	ENSIPUG00000010367	a1cf	99	81.541	Ictalurus_punctatus
ENSCCAG00000018168	A1CF	100	76.748	ENSKMAG00000006568	a1cf	100	77.561	Kryptolebias_marmoratus
ENSCCAG00000018168	A1CF	99	75.777	ENSLBEG00000020994	a1cf	98	77.265	Labrus_bergylta
ENSCCAG00000018168	A1CF	100	81.742	ENSLACG00000008061	A1CF	100	81.742	Latimeria_chalumnae
ENSCCAG00000018168	A1CF	100	82.609	ENSLOCG00000006302	a1cf	100	82.609	Lepisosteus_oculatus
ENSCCAG00000018168	A1CF	100	94.622	ENSLAFG00000015462	A1CF	100	94.622	Loxodonta_africana
ENSCCAG00000018168	A1CF	100	97.470	ENSMFAG00000035948	A1CF	100	97.470	Macaca_fascicularis
ENSCCAG00000018168	A1CF	100	97.470	ENSMMUG00000007077	A1CF	100	97.470	Macaca_mulatta
ENSCCAG00000018168	A1CF	100	97.302	ENSMNEG00000031454	A1CF	100	97.302	Macaca_nemestrina
ENSCCAG00000018168	A1CF	100	98.651	ENSMLEG00000037223	A1CF	100	98.651	Mandrillus_leucophaeus
ENSCCAG00000018168	A1CF	100	73.486	ENSMAMG00000010402	a1cf	100	75.817	Mastacembelus_armatus
ENSCCAG00000018168	A1CF	100	76.254	ENSMZEG00005013245	a1cf	100	77.258	Maylandia_zebra
ENSCCAG00000018168	A1CF	100	88.571	ENSMGAG00000001507	A1CF	100	88.571	Meleagris_gallopavo
ENSCCAG00000018168	A1CF	100	93.109	ENSMAUG00000007422	A1cf	100	94.286	Mesocricetus_auratus
ENSCCAG00000018168	A1CF	100	95.151	ENSMICG00000003377	A1CF	100	95.151	Microcebus_murinus
ENSCCAG00000018168	A1CF	100	94.118	ENSMOCG00000021536	A1cf	100	94.286	Microtus_ochrogaster
ENSCCAG00000018168	A1CF	100	67.488	ENSMMOG00000009422	a1cf	100	69.622	Mola_mola
ENSCCAG00000018168	A1CF	92	90.092	ENSMODG00000016478	A1CF	99	90.092	Monodelphis_domestica
ENSCCAG00000018168	A1CF	100	72.074	ENSMALG00000012992	a1cf	100	72.074	Monopterus_albus
ENSCCAG00000018168	A1CF	100	93.445	MGP_CAROLIEiJ_G0022873	A1cf	100	93.782	Mus_caroli
ENSCCAG00000018168	A1CF	100	93.445	ENSMUSG00000052595	A1cf	99	96.316	Mus_musculus
ENSCCAG00000018168	A1CF	100	92.941	MGP_PahariEiJ_G0014366	A1cf	100	92.941	Mus_pahari
ENSCCAG00000018168	A1CF	100	92.941	MGP_SPRETEiJ_G0023792	A1cf	100	93.277	Mus_spretus
ENSCCAG00000018168	A1CF	100	90.051	ENSMPUG00000016971	A1CF	100	90.219	Mustela_putorius_furo
ENSCCAG00000018168	A1CF	100	94.622	ENSMLUG00000016071	A1CF	100	94.790	Myotis_lucifugus
ENSCCAG00000018168	A1CF	100	94.790	ENSNGAG00000015136	A1cf	100	95.294	Nannospalax_galili
ENSCCAG00000018168	A1CF	100	74.551	ENSNBRG00000001712	a1cf	100	76.672	Neolamprologus_brichardi
ENSCCAG00000018168	A1CF	100	98.992	ENSNLEG00000012028	A1CF	100	98.992	Nomascus_leucogenys
ENSCCAG00000018168	A1CF	94	90.018	ENSMEUG00000015909	A1CF	100	90.018	Notamacropus_eugenii
ENSCCAG00000018168	A1CF	89	85.524	ENSOPRG00000010667	A1CF	98	85.421	Ochotona_princeps
ENSCCAG00000018168	A1CF	100	74.878	ENSONIG00000019105	a1cf	100	76.183	Oreochromis_niloticus
ENSCCAG00000018168	A1CF	78	88.865	ENSOANG00000007360	A1CF	99	88.865	Ornithorhynchus_anatinus
ENSCCAG00000018168	A1CF	100	93.289	ENSOCUG00000011587	A1CF	100	94.463	Oryctolagus_cuniculus
ENSCCAG00000018168	A1CF	100	74.351	ENSORLG00000013342	a1cf	100	74.351	Oryzias_latipes
ENSCCAG00000018168	A1CF	100	75.777	ENSORLG00020000586	a1cf	100	76.144	Oryzias_latipes_hni
ENSCCAG00000018168	A1CF	100	75.614	ENSORLG00015018569	a1cf	100	75.980	Oryzias_latipes_hsok
ENSCCAG00000018168	A1CF	100	75.123	ENSOMEG00000013531	a1cf	100	75.123	Oryzias_melastigma
ENSCCAG00000018168	A1CF	100	95.784	ENSOGAG00000012884	A1CF	100	96.121	Otolemur_garnettii
ENSCCAG00000018168	A1CF	100	95.126	ENSOARG00000013695	A1CF	100	95.462	Ovis_aries
ENSCCAG00000018168	A1CF	100	96.517	ENSPPAG00000028115	A1CF	100	99.190	Pan_paniscus
ENSCCAG00000018168	A1CF	100	95.278	ENSPPRG00000012180	A1CF	100	95.447	Panthera_pardus
ENSCCAG00000018168	A1CF	100	95.278	ENSPTIG00000021223	A1CF	100	95.447	Panthera_tigris_altaica
ENSCCAG00000018168	A1CF	100	98.151	ENSPTRG00000002508	A1CF	100	98.151	Pan_troglodytes
ENSCCAG00000018168	A1CF	100	97.470	ENSPANG00000021988	A1CF	100	97.470	Papio_anubis
ENSCCAG00000018168	A1CF	100	80.634	ENSPKIG00000025176	a1cf	100	80.634	Paramormyrops_kingsleyae
ENSCCAG00000018168	A1CF	100	87.374	ENSPSIG00000010318	A1CF	100	87.374	Pelodiscus_sinensis
ENSCCAG00000018168	A1CF	88	71.238	ENSPMGG00000013359	a1cf	99	67.174	Periophthalmus_magnuspinnatus
ENSCCAG00000018168	A1CF	100	94.958	ENSPEMG00000015021	A1cf	100	94.958	Peromyscus_maniculatus_bairdii
ENSCCAG00000018168	A1CF	100	89.899	ENSPCIG00000002175	A1CF	100	89.899	Phascolarctos_cinereus
ENSCCAG00000018168	A1CF	100	76.059	ENSPFOG00000007437	-	100	78.013	Poecilia_formosa
ENSCCAG00000018168	A1CF	100	76.221	ENSPFOG00000006683	a1cf	100	78.176	Poecilia_formosa
ENSCCAG00000018168	A1CF	100	74.919	ENSPLAG00000001210	-	100	76.873	Poecilia_latipinna
ENSCCAG00000018168	A1CF	100	74.919	ENSPLAG00000000026	a1cf	100	76.873	Poecilia_latipinna
ENSCCAG00000018168	A1CF	100	68.464	ENSPMEG00000015529	-	100	70.425	Poecilia_mexicana
ENSCCAG00000018168	A1CF	100	67.320	ENSPMEG00000000921	a1cf	100	69.281	Poecilia_mexicana
ENSCCAG00000018168	A1CF	100	76.059	ENSPREG00000016298	a1cf	100	77.850	Poecilia_reticulata
ENSCCAG00000018168	A1CF	100	97.479	ENSPPYG00000002819	A1CF	100	97.479	Pongo_abelii
ENSCCAG00000018168	A1CF	79	73.941	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSCCAG00000018168	A1CF	100	96.644	ENSPCOG00000024172	A1CF	100	96.644	Propithecus_coquereli
ENSCCAG00000018168	A1CF	100	75.530	ENSPNYG00000017944	a1cf	100	77.651	Pundamilia_nyererei
ENSCCAG00000018168	A1CF	100	79.801	ENSPNAG00000007704	a1cf	100	79.801	Pygocentrus_nattereri
ENSCCAG00000018168	A1CF	100	92.437	ENSRNOG00000033195	A1cf	100	92.773	Rattus_norvegicus
ENSCCAG00000018168	A1CF	100	92.101	ENSRBIG00000042892	A1CF	100	95.874	Rhinopithecus_bieti
ENSCCAG00000018168	A1CF	100	98.820	ENSRROG00000041398	A1CF	100	98.820	Rhinopithecus_roxellana
ENSCCAG00000018168	A1CF	100	98.992	ENSSBOG00000021930	A1CF	100	98.992	Saimiri_boliviensis_boliviensis
ENSCCAG00000018168	A1CF	100	90.067	ENSSHAG00000005096	A1CF	100	90.067	Sarcophilus_harrisii
ENSCCAG00000018168	A1CF	100	78.939	ENSSFOG00015011774	a1cf	100	78.939	Scleropages_formosus
ENSCCAG00000018168	A1CF	100	75.407	ENSSMAG00000013271	a1cf	100	75.733	Scophthalmus_maximus
ENSCCAG00000018168	A1CF	100	76.451	ENSSDUG00000013930	a1cf	100	77.612	Seriola_dumerili
ENSCCAG00000018168	A1CF	100	69.472	ENSSLDG00000004290	a1cf	100	70.132	Seriola_lalandi_dorsalis
ENSCCAG00000018168	A1CF	99	81.450	ENSSARG00000005940	A1CF	99	81.788	Sorex_araneus
ENSCCAG00000018168	A1CF	98	84.797	ENSSPUG00000006797	A1CF	95	87.676	Sphenodon_punctatus
ENSCCAG00000018168	A1CF	100	96.303	ENSSSCG00000010431	A1CF	100	96.303	Sus_scrofa
ENSCCAG00000018168	A1CF	100	87.043	ENSTGUG00000005090	A1CF	100	87.043	Taeniopygia_guttata
ENSCCAG00000018168	A1CF	100	74.878	ENSTRUG00000001982	a1cf	100	75.041	Takifugu_rubripes
ENSCCAG00000018168	A1CF	100	75.285	ENSTNIG00000003580	a1cf	100	75.610	Tetraodon_nigroviridis
ENSCCAG00000018168	A1CF	100	86.235	ENSTTRG00000013190	A1CF	100	86.733	Tursiops_truncatus
ENSCCAG00000018168	A1CF	100	94.604	ENSUAMG00000020065	A1CF	100	94.604	Ursus_americanus
ENSCCAG00000018168	A1CF	100	95.447	ENSUMAG00000011162	A1CF	100	95.616	Ursus_maritimus
ENSCCAG00000018168	A1CF	87	90.019	ENSVPAG00000006130	A1CF	86	90.019	Vicugna_pacos
ENSCCAG00000018168	A1CF	100	94.604	ENSVVUG00000002504	A1CF	100	94.604	Vulpes_vulpes
ENSCCAG00000018168	A1CF	100	79.264	ENSXETG00000006611	a1cf	100	79.264	Xenopus_tropicalis
ENSCCAG00000018168	A1CF	100	76.230	ENSXCOG00000003302	a1cf	100	77.705	Xiphophorus_couchianus
ENSCCAG00000018168	A1CF	100	77.377	ENSXMAG00000016703	a1cf	100	78.852	Xiphophorus_maculatus