EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000018939 (Gene tree)
Gene ID: 108286875
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 41527 bases
Position: chrKV389757.1:313111-354637
Accession: 108286875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000003824	POP1	PF06978.11	3.3e-39	1	2
ENSCCAP00000003824	POP1	PF06978.11	3.3e-39	2	2
ENSCCAP00000003855	POP1	PF06978.11	1.2e-36	1	2
ENSCCAP00000003855	POP1	PF06978.11	1.2e-36	2	2
ENSCCAP00000003855	POPLD	PF08170.12	1.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000020663	POP1-202	3027	XM_017504995	ENSCCAP00000003855	1008 (aa)	XP_017360484	A0A2K5PJQ7
ENSCCAT00000020596	POP1-201	1668	-	ENSCCAP00000003824	527 (aa)	-	A0A2K5PJJ5

Gene Model

Click here to download ENSCCAG00000018939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000018939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000018939	POP1	100	92.871	ENSG00000104356	POP1	100	96.721	Homo_sapiens
ENSCCAG00000018939	POP1	100	48.276	ENSAPOG00000008198	pop1	100	48.276	Acanthochromis_polyacanthus
ENSCCAG00000018939	POP1	94	85.772	ENSAMEG00000000556	POP1	100	79.029	Ailuropoda_melanoleuca
ENSCCAG00000018939	POP1	91	49.363	ENSACIG00000004169	POP1	100	47.133	Amphilophus_citrinellus
ENSCCAG00000018939	POP1	100	47.328	ENSAOCG00000010991	pop1	100	47.424	Amphiprion_ocellaris
ENSCCAG00000018939	POP1	100	45.315	ENSAPEG00000007607	pop1	100	45.507	Amphiprion_percula
ENSCCAG00000018939	POP1	100	46.819	ENSATEG00000024814	POP1	100	46.896	Anabas_testudineus
ENSCCAG00000018939	POP1	94	62.276	ENSAPLG00000014418	POP1	100	62.276	Anas_platyrhynchos
ENSCCAG00000018939	POP1	99	56.062	ENSACAG00000016083	POP1	100	56.268	Anolis_carolinensis
ENSCCAG00000018939	POP1	89	96.012	ENSANAG00000026360	POP1	100	96.012	Aotus_nancymaae
ENSCCAG00000018939	POP1	93	52.843	ENSACLG00000010951	pop1	100	47.137	Astatotilapia_calliptera
ENSCCAG00000018939	POP1	100	46.039	ENSAMXG00000014483	POP1	91	70.886	Astyanax_mexicanus
ENSCCAG00000018939	POP1	94	87.018	ENSBTAG00000012596	POP1	100	79.179	Bos_taurus
ENSCCAG00000018939	POP1	100	96.150	ENSCJAG00000015567	POP1	100	96.150	Callithrix_jacchus
ENSCCAG00000018939	POP1	94	87.830	ENSCAFG00000000469	POP1	100	79.883	Canis_familiaris
ENSCCAG00000018939	POP1	94	87.830	ENSCAFG00020026765	POP1	100	80.957	Canis_lupus_dingo
ENSCCAG00000018939	POP1	94	87.247	ENSCHIG00000017066	POP1	100	79.297	Capra_hircus
ENSCCAG00000018939	POP1	100	84.961	ENSTSYG00000003097	POP1	100	84.961	Carlito_syrichta
ENSCCAG00000018939	POP1	100	76.190	ENSCAPG00000007251	POP1	100	75.996	Cavia_aperea
ENSCCAG00000018939	POP1	100	79.199	ENSCPOG00000002901	POP1	100	79.004	Cavia_porcellus
ENSCCAG00000018939	POP1	100	92.480	ENSCATG00000040916	POP1	100	92.480	Cercocebus_atys
ENSCCAG00000018939	POP1	100	80.859	ENSCLAG00000007208	POP1	97	80.859	Chinchilla_lanigera
ENSCCAG00000018939	POP1	91	93.167	ENSCSAG00000012340	POP1	99	93.167	Chlorocebus_sabaeus
ENSCCAG00000018939	POP1	97	79.406	ENSCHOG00000011432	POP1	100	79.406	Choloepus_hoffmanni
ENSCCAG00000018939	POP1	100	64.922	ENSCPBG00000006373	POP1	100	65.019	Chrysemys_picta_bellii
ENSCCAG00000018939	POP1	84	38.132	ENSCING00000008323	-	90	36.396	Ciona_intestinalis
ENSCCAG00000018939	POP1	100	92.578	ENSCANG00000001647	POP1	100	92.578	Colobus_angolensis_palliatus
ENSCCAG00000018939	POP1	100	75.805	ENSCGRG00001017308	Pop1	100	75.805	Cricetulus_griseus_chok1gshd
ENSCCAG00000018939	POP1	100	70.244	ENSCGRG00000010824	Pop1	100	70.244	Cricetulus_griseus_crigri
ENSCCAG00000018939	POP1	100	45.925	ENSCSEG00000008737	POP1	100	46.117	Cynoglossus_semilaevis
ENSCCAG00000018939	POP1	100	48.116	ENSCVAG00000022248	pop1	100	48.309	Cyprinodon_variegatus
ENSCCAG00000018939	POP1	80	48.122	ENSDARG00000102087	pop1	99	45.543	Danio_rerio
ENSCCAG00000018939	POP1	95	86.785	ENSDNOG00000019974	POP1	100	76.626	Dasypus_novemcinctus
ENSCCAG00000018939	POP1	100	71.540	ENSDORG00000015384	Pop1	100	69.874	Dipodomys_ordii
ENSCCAG00000018939	POP1	68	34.435	FBgn0026702	l(1)G0045	70	32.595	Drosophila_melanogaster
ENSCCAG00000018939	POP1	86	75.991	ENSETEG00000007839	POP1	88	69.474	Echinops_telfairi
ENSCCAG00000018939	POP1	77	45.567	ENSEBUG00000009897	pop1	96	42.998	Eptatretus_burgeri
ENSCCAG00000018939	POP1	94	90.467	ENSEASG00005003189	POP1	98	82.715	Equus_asinus_asinus
ENSCCAG00000018939	POP1	94	90.669	ENSECAG00000024236	POP1	100	82.617	Equus_caballus
ENSCCAG00000018939	POP1	68	80.556	ENSEEUG00000003050	-	70	80.556	Erinaceus_europaeus
ENSCCAG00000018939	POP1	100	48.464	ENSELUG00000003526	pop1	100	48.560	Esox_lucius
ENSCCAG00000018939	POP1	94	89.452	ENSFCAG00000002168	POP1	100	82.227	Felis_catus
ENSCCAG00000018939	POP1	100	60.938	ENSFALG00000005711	POP1	100	60.195	Ficedula_albicollis
ENSCCAG00000018939	POP1	100	80.957	ENSFDAG00000017068	POP1	100	80.957	Fukomys_damarensis
ENSCCAG00000018939	POP1	91	52.235	ENSFHEG00000019518	pop1	100	47.099	Fundulus_heteroclitus
ENSCCAG00000018939	POP1	100	45.385	ENSGMOG00000000659	POP1	100	45.481	Gadus_morhua
ENSCCAG00000018939	POP1	100	47.605	ENSGAFG00000019770	POP1	100	47.605	Gambusia_affinis
ENSCCAG00000018939	POP1	100	46.388	ENSGACG00000003499	pop1	100	46.293	Gasterosteus_aculeatus
ENSCCAG00000018939	POP1	100	63.279	ENSGAGG00000011737	POP1	98	63.514	Gopherus_agassizii
ENSCCAG00000018939	POP1	100	92.871	ENSGGOG00000003176	POP1	100	92.871	Gorilla_gorilla
ENSCCAG00000018939	POP1	100	47.323	ENSHBUG00000021583	pop1	100	47.424	Haplochromis_burtoni
ENSCCAG00000018939	POP1	100	79.883	ENSHGLG00000006029	POP1	100	79.883	Heterocephalus_glaber_female
ENSCCAG00000018939	POP1	100	79.883	ENSHGLG00100016879	POP1	100	79.883	Heterocephalus_glaber_male
ENSCCAG00000018939	POP1	100	47.260	ENSHCOG00000013888	pop1	100	47.260	Hippocampus_comes
ENSCCAG00000018939	POP1	100	45.412	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSCCAG00000018939	POP1	100	81.836	ENSSTOG00000011455	POP1	97	81.836	Ictidomys_tridecemlineatus
ENSCCAG00000018939	POP1	100	76.465	ENSJJAG00000013325	Pop1	100	76.465	Jaculus_jaculus
ENSCCAG00000018939	POP1	100	47.522	ENSKMAG00000001346	POP1	100	47.522	Kryptolebias_marmoratus
ENSCCAG00000018939	POP1	100	46.237	ENSLBEG00000024457	POP1	100	46.237	Labrus_bergylta
ENSCCAG00000018939	POP1	95	56.237	ENSLACG00000012498	POP1	99	56.338	Latimeria_chalumnae
ENSCCAG00000018939	POP1	100	50.864	ENSLOCG00000009817	POP1	100	51.203	Lepisosteus_oculatus
ENSCCAG00000018939	POP1	100	82.004	ENSLAFG00000010770	POP1	100	82.004	Loxodonta_africana
ENSCCAG00000018939	POP1	100	92.578	ENSMFAG00000000347	POP1	100	92.578	Macaca_fascicularis
ENSCCAG00000018939	POP1	100	92.480	ENSMNEG00000036870	POP1	100	92.480	Macaca_nemestrina
ENSCCAG00000018939	POP1	100	92.285	ENSMLEG00000034986	POP1	100	92.285	Mandrillus_leucophaeus
ENSCCAG00000018939	POP1	100	47.121	ENSMAMG00000004040	pop1	100	47.217	Mastacembelus_armatus
ENSCCAG00000018939	POP1	100	47.323	ENSMZEG00005025448	pop1	100	47.238	Maylandia_zebra
ENSCCAG00000018939	POP1	100	57.333	ENSMGAG00000012167	POP1	100	57.755	Meleagris_gallopavo
ENSCCAG00000018939	POP1	94	81.744	ENSMAUG00000017537	Pop1	100	75.536	Mesocricetus_auratus
ENSCCAG00000018939	POP1	100	85.700	ENSMICG00000004361	POP1	100	85.700	Microcebus_murinus
ENSCCAG00000018939	POP1	100	74.219	ENSMOCG00000006356	Pop1	100	75.000	Microtus_ochrogaster
ENSCCAG00000018939	POP1	100	45.472	ENSMMOG00000018242	pop1	100	45.472	Mola_mola
ENSCCAG00000018939	POP1	100	69.052	ENSMODG00000006561	POP1	100	68.859	Monodelphis_domestica
ENSCCAG00000018939	POP1	100	47.725	ENSMALG00000012621	POP1	100	48.596	Monopterus_albus
ENSCCAG00000018939	POP1	100	75.684	MGP_CAROLIEiJ_G0019726	Pop1	100	75.684	Mus_caroli
ENSCCAG00000018939	POP1	100	76.172	ENSMUSG00000022325	Pop1	100	76.172	Mus_musculus
ENSCCAG00000018939	POP1	100	75.977	MGP_PahariEiJ_G0019735	Pop1	100	75.977	Mus_pahari
ENSCCAG00000018939	POP1	100	75.684	MGP_SPRETEiJ_G0020622	Pop1	100	75.684	Mus_spretus
ENSCCAG00000018939	POP1	94	88.710	ENSMPUG00000015250	POP1	100	81.031	Mustela_putorius_furo
ENSCCAG00000018939	POP1	94	86.410	ENSMLUG00000010204	POP1	100	76.316	Myotis_lucifugus
ENSCCAG00000018939	POP1	100	80.371	ENSNGAG00000001582	Pop1	100	80.371	Nannospalax_galili
ENSCCAG00000018939	POP1	90	48.013	ENSNBRG00000002356	pop1	94	48.195	Neolamprologus_brichardi
ENSCCAG00000018939	POP1	100	92.188	ENSNLEG00000002541	POP1	100	92.188	Nomascus_leucogenys
ENSCCAG00000018939	POP1	95	61.273	ENSMEUG00000003118	POP1	98	61.273	Notamacropus_eugenii
ENSCCAG00000018939	POP1	94	83.976	ENSOPRG00000007667	POP1	100	77.832	Ochotona_princeps
ENSCCAG00000018939	POP1	94	84.444	ENSODEG00000003984	POP1	100	78.265	Octodon_degus
ENSCCAG00000018939	POP1	100	48.084	ENSONIG00000016445	pop1	100	48.180	Oreochromis_niloticus
ENSCCAG00000018939	POP1	78	71.341	ENSOANG00000001278	-	94	64.143	Ornithorhynchus_anatinus
ENSCCAG00000018939	POP1	100	80.272	ENSOCUG00000017400	POP1	100	80.272	Oryctolagus_cuniculus
ENSCCAG00000018939	POP1	100	48.293	ENSORLG00000002839	pop1	100	48.393	Oryzias_latipes
ENSCCAG00000018939	POP1	91	49.947	ENSORLG00020022450	POP1	96	50.000	Oryzias_latipes_hni
ENSCCAG00000018939	POP1	100	48.488	ENSORLG00015012746	POP1	100	48.120	Oryzias_latipes_hsok
ENSCCAG00000018939	POP1	100	48.279	ENSOMEG00000006915	pop1	99	48.627	Oryzias_melastigma
ENSCCAG00000018939	POP1	100	83.105	ENSOGAG00000001466	POP1	100	83.105	Otolemur_garnettii
ENSCCAG00000018939	POP1	100	92.969	ENSPPAG00000018410	POP1	100	92.969	Pan_paniscus
ENSCCAG00000018939	POP1	94	88.866	ENSPPRG00000005002	POP1	100	82.146	Panthera_pardus
ENSCCAG00000018939	POP1	94	89.271	ENSPTIG00000016527	POP1	100	82.537	Panthera_tigris_altaica
ENSCCAG00000018939	POP1	100	93.164	ENSPTRG00000020458	POP1	100	93.164	Pan_troglodytes
ENSCCAG00000018939	POP1	100	91.992	ENSPANG00000009704	POP1	100	91.992	Papio_anubis
ENSCCAG00000018939	POP1	100	49.565	ENSPKIG00000016325	POP1	100	49.565	Paramormyrops_kingsleyae
ENSCCAG00000018939	POP1	100	62.270	ENSPSIG00000012343	POP1	100	62.270	Pelodiscus_sinensis
ENSCCAG00000018939	POP1	92	48.666	ENSPMGG00000022253	POP1	95	49.038	Periophthalmus_magnuspinnatus
ENSCCAG00000018939	POP1	93	81.911	ENSPEMG00000023633	Pop1	100	75.120	Peromyscus_maniculatus_bairdii
ENSCCAG00000018939	POP1	91	43.611	ENSPMAG00000003209	POP1	100	43.836	Petromyzon_marinus
ENSCCAG00000018939	POP1	100	66.925	ENSPCIG00000012216	POP1	100	67.345	Phascolarctos_cinereus
ENSCCAG00000018939	POP1	100	48.876	ENSPFOG00000012490	POP1	100	48.680	Poecilia_formosa
ENSCCAG00000018939	POP1	100	48.974	ENSPLAG00000004646	POP1	100	48.778	Poecilia_latipinna
ENSCCAG00000018939	POP1	100	49.128	ENSPMEG00000019592	POP1	100	48.934	Poecilia_mexicana
ENSCCAG00000018939	POP1	100	48.974	ENSPREG00000020951	POP1	100	48.778	Poecilia_reticulata
ENSCCAG00000018939	POP1	100	92.969	ENSPPYG00000018777	POP1	100	92.969	Pongo_abelii
ENSCCAG00000018939	POP1	94	83.570	ENSPCAG00000016662	POP1	100	75.805	Procavia_capensis
ENSCCAG00000018939	POP1	100	85.896	ENSPCOG00000019420	POP1	100	85.896	Propithecus_coquereli
ENSCCAG00000018939	POP1	94	87.627	ENSPVAG00000014468	POP1	100	80.878	Pteropus_vampyrus
ENSCCAG00000018939	POP1	90	48.120	ENSPNYG00000004476	pop1	100	46.304	Pundamilia_nyererei
ENSCCAG00000018939	POP1	100	46.660	ENSPNAG00000000265	pop1	100	46.531	Pygocentrus_nattereri
ENSCCAG00000018939	POP1	100	76.540	ENSRNOG00000005243	Pop1	100	76.540	Rattus_norvegicus
ENSCCAG00000018939	POP1	100	92.383	ENSRBIG00000007996	POP1	100	92.383	Rhinopithecus_bieti
ENSCCAG00000018939	POP1	100	92.578	ENSRROG00000012334	POP1	100	92.578	Rhinopithecus_roxellana
ENSCCAG00000018939	POP1	99	95.257	ENSSBOG00000020830	POP1	100	95.257	Saimiri_boliviensis_boliviensis
ENSCCAG00000018939	POP1	100	67.957	ENSSHAG00000000296	POP1	100	67.957	Sarcophilus_harrisii
ENSCCAG00000018939	POP1	100	47.241	ENSSFOG00015007429	pop1	99	46.731	Scleropages_formosus
ENSCCAG00000018939	POP1	87	53.670	ENSSMAG00000010467	POP1	100	47.139	Scophthalmus_maximus
ENSCCAG00000018939	POP1	100	46.986	ENSSDUG00000007817	POP1	100	47.660	Seriola_dumerili
ENSCCAG00000018939	POP1	100	46.997	ENSSLDG00000012565	POP1	100	47.859	Seriola_lalandi_dorsalis
ENSCCAG00000018939	POP1	100	58.261	ENSSPUG00000003550	-	100	58.721	Sphenodon_punctatus
ENSCCAG00000018939	POP1	100	47.937	ENSSPAG00000014955	pop1	100	47.301	Stegastes_partitus
ENSCCAG00000018939	POP1	94	87.830	ENSSSCG00000006078	POP1	100	80.352	Sus_scrofa
ENSCCAG00000018939	POP1	56	67.450	ENSTGUG00000014352	-	100	67.450	Taeniopygia_guttata
ENSCCAG00000018939	POP1	93	56.614	ENSTGUG00000012011	-	100	56.931	Taeniopygia_guttata
ENSCCAG00000018939	POP1	100	46.289	ENSTRUG00000010856	pop1	100	45.996	Takifugu_rubripes
ENSCCAG00000018939	POP1	95	47.764	ENSTNIG00000013297	pop1	99	48.315	Tetraodon_nigroviridis
ENSCCAG00000018939	POP1	97	80.348	ENSTBEG00000014214	POP1	100	80.348	Tupaia_belangeri
ENSCCAG00000018939	POP1	100	78.983	ENSTTRG00000016071	POP1	100	78.983	Tursiops_truncatus
ENSCCAG00000018939	POP1	99	79.058	ENSUAMG00000017309	POP1	100	79.058	Ursus_americanus
ENSCCAG00000018939	POP1	94	87.424	ENSUMAG00000016952	POP1	100	85.020	Ursus_maritimus
ENSCCAG00000018939	POP1	83	88.686	ENSVPAG00000008278	POP1	88	78.216	Vicugna_pacos
ENSCCAG00000018939	POP1	94	88.032	ENSVVUG00000010994	POP1	100	81.055	Vulpes_vulpes
ENSCCAG00000018939	POP1	100	43.064	ENSXCOG00000017043	POP1	100	43.009	Xiphophorus_couchianus
ENSCCAG00000018939	POP1	100	47.996	ENSXMAG00000002472	POP1	100	47.801	Xiphophorus_maculatus