EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000019247 (Gene tree)
Gene ID: 108296815
Gene Symbol: -
Alias: CIP29|Hcc-1|THO1
Full Name: SAP domain containing ribonucleoprotein
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 64536 bases
Position: chrKV390167.1:243707-308242
Accession: 108296815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000003997	SAP	PF02037.27	9.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000020959	-	1179	XM_017519416	ENSCCAP00000003997	210 (aa)	XP_017374905	A0A2K5PK57

Gene Model

Click here to download ENSCCAG00000019247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000019247	-	100	87.619	ENSCCAG00000004296	-	95	86.893
ENSCCAG00000019247	-	100	78.095	ENSCCAG00000030892	-	98	78.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019247	-	100	100.000	ENSG00000205323	SARNP	100	100.000	Homo_sapiens
ENSCCAG00000019247	-	90	59.694	ENSAPOG00000005247	sarnp	78	59.184	Acanthochromis_polyacanthus
ENSCCAG00000019247	-	100	96.667	ENSAMEG00000011769	SARNP	100	96.667	Ailuropoda_melanoleuca
ENSCCAG00000019247	-	98	59.346	ENSAPEG00000016710	sarnp	99	59.070	Amphiprion_percula
ENSCCAG00000019247	-	98	60.190	ENSATEG00000024594	sarnp	98	59.716	Anabas_testudineus
ENSCCAG00000019247	-	99	83.654	ENSACAG00000015446	SARNP	98	83.654	Anolis_carolinensis
ENSCCAG00000019247	-	100	87.619	ENSANAG00000025021	-	100	90.000	Aotus_nancymaae
ENSCCAG00000019247	-	100	99.048	ENSANAG00000027405	-	100	99.048	Aotus_nancymaae
ENSCCAG00000019247	-	98	58.333	ENSACLG00000016479	sarnp	99	57.870	Astatotilapia_calliptera
ENSCCAG00000019247	-	98	59.624	ENSAMXG00000004834	sarnp	99	59.624	Astyanax_mexicanus
ENSCCAG00000019247	-	100	97.143	ENSBTAG00000020662	SARNP	100	97.143	Bos_taurus
ENSCCAG00000019247	-	93	82.653	ENSBTAG00000032446	-	100	77.465	Bos_taurus
ENSCCAG00000019247	-	100	98.571	ENSCJAG00000007853	-	100	98.571	Callithrix_jacchus
ENSCCAG00000019247	-	95	96.500	ENSCAFG00000023714	SARNP	95	96.500	Canis_familiaris
ENSCCAG00000019247	-	100	84.038	ENSCAFG00020026107	SARNP	100	84.038	Canis_lupus_dingo
ENSCCAG00000019247	-	100	78.095	ENSCHIG00000017443	-	100	78.571	Capra_hircus
ENSCCAG00000019247	-	99	87.440	ENSCHIG00000013335	-	98	87.440	Capra_hircus
ENSCCAG00000019247	-	100	97.619	ENSTSYG00000009225	SARNP	100	97.619	Carlito_syrichta
ENSCCAG00000019247	-	100	97.619	ENSCPOG00000011755	-	100	97.619	Cavia_porcellus
ENSCCAG00000019247	-	100	90.000	ENSCATG00000042076	-	98	90.000	Cercocebus_atys
ENSCCAG00000019247	-	100	100.000	ENSCATG00000045088	SARNP	100	100.000	Cercocebus_atys
ENSCCAG00000019247	-	100	96.667	ENSCLAG00000007774	-	100	96.667	Chinchilla_lanigera
ENSCCAG00000019247	-	100	100.000	ENSCSAG00000005303	SARNP	98	100.000	Chlorocebus_sabaeus
ENSCCAG00000019247	-	94	92.929	ENSCHOG00000005081	SARNP	100	92.929	Choloepus_hoffmanni
ENSCCAG00000019247	-	99	87.081	ENSCPBG00000012618	SARNP	99	87.081	Chrysemys_picta_bellii
ENSCCAG00000019247	-	99	35.088	ENSCING00000015811	-	99	38.596	Ciona_intestinalis
ENSCCAG00000019247	-	100	99.524	ENSCANG00000027918	-	100	99.524	Colobus_angolensis_palliatus
ENSCCAG00000019247	-	98	71.498	ENSCGRG00001022403	-	78	69.756	Cricetulus_griseus_chok1gshd
ENSCCAG00000019247	-	100	78.571	ENSCGRG00001013880	-	100	78.571	Cricetulus_griseus_chok1gshd
ENSCCAG00000019247	-	100	97.143	ENSCGRG00001018129	-	100	97.143	Cricetulus_griseus_chok1gshd
ENSCCAG00000019247	-	100	78.571	ENSCGRG00000004298	-	100	78.571	Cricetulus_griseus_crigri
ENSCCAG00000019247	-	99	77.512	ENSCGRG00000000109	-	76	76.098	Cricetulus_griseus_crigri
ENSCCAG00000019247	-	100	97.143	ENSCGRG00000015182	-	100	97.143	Cricetulus_griseus_crigri
ENSCCAG00000019247	-	98	57.143	ENSCVAG00000010924	sarnp	99	57.604	Cyprinodon_variegatus
ENSCCAG00000019247	-	98	59.524	ENSDARG00000059357	sarnp	98	60.000	Danio_rerio
ENSCCAG00000019247	-	100	96.190	ENSDNOG00000014518	SARNP	100	96.190	Dasypus_novemcinctus
ENSCCAG00000019247	-	100	97.619	ENSDORG00000001065	-	100	97.619	Dipodomys_ordii
ENSCCAG00000019247	-	99	53.302	ENSEBUG00000016080	sarnp	98	52.358	Eptatretus_burgeri
ENSCCAG00000019247	-	100	97.619	ENSECAG00000000708	SARNP	100	97.619	Equus_caballus
ENSCCAG00000019247	-	98	58.879	ENSELUG00000020983	sarnp	99	58.879	Esox_lucius
ENSCCAG00000019247	-	98	57.407	ENSELUG00000006786	HCC1	97	57.407	Esox_lucius
ENSCCAG00000019247	-	100	95.714	ENSFCAG00000037076	SARNP	100	95.714	Felis_catus
ENSCCAG00000019247	-	90	77.660	ENSFALG00000000679	SARNP	73	78.075	Ficedula_albicollis
ENSCCAG00000019247	-	100	98.095	ENSFDAG00000007766	SARNP	100	98.095	Fukomys_damarensis
ENSCCAG00000019247	-	98	56.221	ENSFHEG00000012192	sarnp	99	56.682	Fundulus_heteroclitus
ENSCCAG00000019247	-	98	53.589	ENSGMOG00000011467	sarnp	98	53.589	Gadus_morhua
ENSCCAG00000019247	-	99	85.167	ENSGALG00000030342	SARNP	99	85.167	Gallus_gallus
ENSCCAG00000019247	-	98	56.682	ENSGAFG00000019183	sarnp	99	57.143	Gambusia_affinis
ENSCCAG00000019247	-	98	56.604	ENSGACG00000011615	sarnp	99	56.190	Gasterosteus_aculeatus
ENSCCAG00000019247	-	100	85.714	ENSGGOG00000041309	-	100	86.190	Gorilla_gorilla
ENSCCAG00000019247	-	100	100.000	ENSGGOG00000013217	SARNP	100	100.000	Gorilla_gorilla
ENSCCAG00000019247	-	98	58.796	ENSHBUG00000008761	sarnp	99	58.333	Haplochromis_burtoni
ENSCCAG00000019247	-	100	97.619	ENSHGLG00000016869	SARNP	100	97.619	Heterocephalus_glaber_female
ENSCCAG00000019247	-	100	97.619	ENSHGLG00100014657	SARNP	100	97.619	Heterocephalus_glaber_male
ENSCCAG00000019247	-	99	52.036	ENSHCOG00000015510	sarnp	99	54.419	Hippocampus_comes
ENSCCAG00000019247	-	98	58.654	ENSIPUG00000012503	Sarnp	99	59.135	Ictalurus_punctatus
ENSCCAG00000019247	-	100	97.619	ENSSTOG00000000283	SARNP	100	97.619	Ictidomys_tridecemlineatus
ENSCCAG00000019247	-	100	92.381	ENSJJAG00000001070	-	100	92.381	Jaculus_jaculus
ENSCCAG00000019247	-	92	81.726	ENSJJAG00000011057	-	90	81.726	Jaculus_jaculus
ENSCCAG00000019247	-	98	57.798	ENSKMAG00000013400	sarnp	99	58.257	Kryptolebias_marmoratus
ENSCCAG00000019247	-	98	56.132	ENSLBEG00000025038	sarnp	99	56.422	Labrus_bergylta
ENSCCAG00000019247	-	88	45.026	ENSLACG00000014810	-	100	44.041	Latimeria_chalumnae
ENSCCAG00000019247	-	95	71.859	ENSLACG00000018719	SARNP	88	71.859	Latimeria_chalumnae
ENSCCAG00000019247	-	98	64.352	ENSLOCG00000003621	sarnp	98	64.516	Lepisosteus_oculatus
ENSCCAG00000019247	-	100	96.667	ENSLAFG00000015053	SARNP	100	96.667	Loxodonta_africana
ENSCCAG00000019247	-	100	92.857	ENSMFAG00000032419	-	98	92.857	Macaca_fascicularis
ENSCCAG00000019247	-	100	100.000	ENSMFAG00000045270	SARNP	100	100.000	Macaca_fascicularis
ENSCCAG00000019247	-	100	92.857	ENSMMUG00000037731	-	100	92.857	Macaca_mulatta
ENSCCAG00000019247	-	100	100.000	ENSMMUG00000006289	-	100	100.000	Macaca_mulatta
ENSCCAG00000019247	-	100	100.000	ENSMNEG00000044633	-	100	100.000	Macaca_nemestrina
ENSCCAG00000019247	-	99	91.827	ENSMNEG00000041520	-	97	92.118	Macaca_nemestrina
ENSCCAG00000019247	-	100	81.429	ENSMNEG00000030688	-	98	77.830	Macaca_nemestrina
ENSCCAG00000019247	-	100	89.524	ENSMLEG00000037790	-	98	89.524	Mandrillus_leucophaeus
ENSCCAG00000019247	-	67	97.857	ENSMLEG00000038545	-	86	97.857	Mandrillus_leucophaeus
ENSCCAG00000019247	-	98	57.547	ENSMAMG00000005942	sarnp	99	57.075	Mastacembelus_armatus
ENSCCAG00000019247	-	98	58.796	ENSMZEG00005023533	sarnp	99	58.333	Maylandia_zebra
ENSCCAG00000019247	-	99	85.167	ENSMGAG00000001807	SARNP	99	85.167	Meleagris_gallopavo
ENSCCAG00000019247	-	100	95.714	ENSMAUG00000005256	-	100	95.714	Mesocricetus_auratus
ENSCCAG00000019247	-	100	97.619	ENSMICG00000010902	-	100	97.619	Microcebus_murinus
ENSCCAG00000019247	-	100	97.143	ENSMOCG00000006502	-	100	97.143	Microtus_ochrogaster
ENSCCAG00000019247	-	99	54.286	ENSMMOG00000013258	sarnp	99	53.810	Mola_mola
ENSCCAG00000019247	-	90	56.771	ENSMALG00000009106	sarnp	84	55.385	Monopterus_albus
ENSCCAG00000019247	-	100	95.714	MGP_CAROLIEiJ_G0015958	-	100	95.714	Mus_caroli
ENSCCAG00000019247	-	100	95.714	ENSMUSG00000078427	Sarnp	100	95.714	Mus_musculus
ENSCCAG00000019247	-	94	95.431	MGP_PahariEiJ_G0031126	-	100	95.431	Mus_pahari
ENSCCAG00000019247	-	100	95.714	MGP_SPRETEiJ_G0016783	-	100	95.714	Mus_spretus
ENSCCAG00000019247	-	100	97.619	ENSMPUG00000000885	SARNP	100	97.619	Mustela_putorius_furo
ENSCCAG00000019247	-	80	92.216	ENSMLUG00000003565	SARNP	100	92.216	Myotis_lucifugus
ENSCCAG00000019247	-	100	95.714	ENSNGAG00000010245	-	100	95.714	Nannospalax_galili
ENSCCAG00000019247	-	87	95.628	ENSNLEG00000017599	-	99	95.628	Nomascus_leucogenys
ENSCCAG00000019247	-	100	85.238	ENSMEUG00000014879	SARNP	100	85.238	Notamacropus_eugenii
ENSCCAG00000019247	-	100	74.286	ENSOPRG00000007733	SARNP	100	74.286	Ochotona_princeps
ENSCCAG00000019247	-	100	97.143	ENSODEG00000004608	-	100	97.143	Octodon_degus
ENSCCAG00000019247	-	100	78.095	ENSODEG00000012047	-	100	80.000	Octodon_degus
ENSCCAG00000019247	-	98	59.259	ENSONIG00000016523	sarnp	99	58.796	Oreochromis_niloticus
ENSCCAG00000019247	-	95	85.714	ENSOANG00000002882	SARNP	100	85.714	Ornithorhynchus_anatinus
ENSCCAG00000019247	-	98	94.203	ENSOCUG00000010117	SARNP	99	94.203	Oryctolagus_cuniculus
ENSCCAG00000019247	-	98	59.809	ENSORLG00000029565	sarnp	87	59.330	Oryzias_latipes
ENSCCAG00000019247	-	98	59.809	ENSORLG00015021649	sarnp	87	59.330	Oryzias_latipes_hsok
ENSCCAG00000019247	-	98	56.818	ENSOMEG00000014699	sarnp	98	56.364	Oryzias_melastigma
ENSCCAG00000019247	-	75	94.904	ENSOGAG00000001693	SARNP	94	94.904	Otolemur_garnettii
ENSCCAG00000019247	-	100	97.143	ENSOARG00000011218	SARNP	100	97.143	Ovis_aries
ENSCCAG00000019247	-	100	81.905	ENSPPAG00000042587	-	98	82.381	Pan_paniscus
ENSCCAG00000019247	-	100	100.000	ENSPPAG00000039513	SARNP	100	100.000	Pan_paniscus
ENSCCAG00000019247	-	100	95.714	ENSPPRG00000020704	SARNP	100	95.714	Panthera_pardus
ENSCCAG00000019247	-	100	100.000	ENSPTRG00000029747	SARNP	100	100.000	Pan_troglodytes
ENSCCAG00000019247	-	100	81.905	ENSPTRG00000046696	-	98	82.381	Pan_troglodytes
ENSCCAG00000019247	-	100	99.524	ENSPANG00000013149	-	100	99.524	Papio_anubis
ENSCCAG00000019247	-	100	90.952	ENSPANG00000006001	-	98	90.952	Papio_anubis
ENSCCAG00000019247	-	98	60.377	ENSPKIG00000002212	sarnp	99	60.369	Paramormyrops_kingsleyae
ENSCCAG00000019247	-	98	84.878	ENSPSIG00000002998	SARNP	98	84.878	Pelodiscus_sinensis
ENSCCAG00000019247	-	100	95.714	ENSPEMG00000000923	-	100	95.714	Peromyscus_maniculatus_bairdii
ENSCCAG00000019247	-	98	52.093	ENSPMAG00000009808	sarnp	95	53.023	Petromyzon_marinus
ENSCCAG00000019247	-	95	93.970	ENSPCIG00000024663	SARNP	99	93.970	Phascolarctos_cinereus
ENSCCAG00000019247	-	98	56.682	ENSPFOG00000013517	sarnp	99	57.798	Poecilia_formosa
ENSCCAG00000019247	-	98	56.019	ENSPLAG00000017096	sarnp	99	58.525	Poecilia_latipinna
ENSCCAG00000019247	-	98	56.019	ENSPMEG00000014306	sarnp	99	58.525	Poecilia_mexicana
ENSCCAG00000019247	-	99	50.952	ENSPREG00000019598	sarnp	85	50.476	Poecilia_reticulata
ENSCCAG00000019247	-	100	100.000	ENSPPYG00000004630	SARNP	100	100.000	Pongo_abelii
ENSCCAG00000019247	-	98	58.852	ENSPNAG00000000975	sarnp	99	58.852	Pygocentrus_nattereri
ENSCCAG00000019247	-	100	96.667	ENSRNOG00000030520	Sarnp	100	96.667	Rattus_norvegicus
ENSCCAG00000019247	-	100	75.238	ENSRBIG00000037388	-	98	76.190	Rhinopithecus_bieti
ENSCCAG00000019247	-	100	99.524	ENSRBIG00000039295	-	100	99.524	Rhinopithecus_bieti
ENSCCAG00000019247	-	95	97.990	ENSRBIG00000019503	-	96	97.990	Rhinopithecus_bieti
ENSCCAG00000019247	-	100	89.202	ENSRBIG00000026928	-	98	89.671	Rhinopithecus_bieti
ENSCCAG00000019247	-	100	99.524	ENSRROG00000035177	-	100	99.524	Rhinopithecus_roxellana
ENSCCAG00000019247	-	100	89.202	ENSRROG00000044575	-	98	89.671	Rhinopithecus_roxellana
ENSCCAG00000019247	-	100	96.190	ENSSBOG00000028635	-	98	96.190	Saimiri_boliviensis_boliviensis
ENSCCAG00000019247	-	100	82.381	ENSSBOG00000022787	-	97	82.381	Saimiri_boliviensis_boliviensis
ENSCCAG00000019247	-	100	100.000	ENSSBOG00000035337	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000019247	-	100	94.286	ENSSHAG00000008865	SARNP	100	94.286	Sarcophilus_harrisii
ENSCCAG00000019247	-	98	63.014	ENSSFOG00015020709	sarnp	99	62.621	Scleropages_formosus
ENSCCAG00000019247	-	98	56.938	ENSSMAG00000018587	sarnp	99	56.190	Scophthalmus_maximus
ENSCCAG00000019247	-	98	60.476	ENSSDUG00000005484	sarnp	99	60.000	Seriola_dumerili
ENSCCAG00000019247	-	98	60.476	ENSSLDG00000003775	sarnp	99	60.000	Seriola_lalandi_dorsalis
ENSCCAG00000019247	-	100	69.524	ENSSARG00000004858	SARNP	100	69.524	Sorex_araneus
ENSCCAG00000019247	-	95	65.347	ENSSPUG00000015135	SARNP	96	65.347	Sphenodon_punctatus
ENSCCAG00000019247	-	100	97.619	ENSSSCG00000000364	SARNP	100	97.619	Sus_scrofa
ENSCCAG00000019247	-	94	76.650	ENSTGUG00000016126	SARNP	100	76.650	Taeniopygia_guttata
ENSCCAG00000019247	-	99	55.189	ENSTRUG00000009497	-	99	57.143	Takifugu_rubripes
ENSCCAG00000019247	-	99	56.164	ENSTNIG00000012432	sarnp	99	56.164	Tetraodon_nigroviridis
ENSCCAG00000019247	-	100	91.429	ENSTTRG00000009735	SARNP	100	91.429	Tursiops_truncatus
ENSCCAG00000019247	-	78	89.697	ENSUAMG00000015093	-	86	89.697	Ursus_americanus
ENSCCAG00000019247	-	94	96.954	ENSVPAG00000009515	SARNP	100	96.954	Vicugna_pacos
ENSCCAG00000019247	-	100	96.667	ENSVVUG00000022779	SARNP	100	96.667	Vulpes_vulpes
ENSCCAG00000019247	-	98	74.757	ENSXETG00000024657	sarnp	98	74.757	Xenopus_tropicalis
ENSCCAG00000019247	-	98	57.143	ENSXMAG00000009356	sarnp	99	57.604	Xiphophorus_maculatus