EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000019347 (Gene tree)
Gene ID: 108306156
Gene Symbol: -
Alias: -
Full Name: 28S ribosomal protein S18c%2C mitochondrial pseudogene
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 435 bases
Position: chrKV389496.1:3210106-3210540
Accession: 108306156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000004040	Ribosomal_S18	PF01084.20	2.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000021034	-	435	-	ENSCCAP00000004040	144 (aa)	-	A0A2K5PK79

Gene Model

Click here to download ENSCCAG00000019347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000019347	-	99	81.818	ENSCCAG00000025155	-	95	81.818
ENSCCAG00000019347	-	100	80.556	ENSCCAG00000028283	-	100	80.556
ENSCCAG00000019347	-	100	95.833	ENSCCAG00000026577	-	100	95.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019347	-	100	90.972	ENSG00000163319	MRPS18C	100	90.972	Homo_sapiens
ENSCCAG00000019347	-	100	75.694	ENSAMEG00000004915	MRPS18C	100	75.694	Ailuropoda_melanoleuca
ENSCCAG00000019347	-	99	76.000	ENSANAG00000025323	-	95	76.000	Aotus_nancymaae
ENSCCAG00000019347	-	100	84.028	ENSANAG00000028055	-	100	84.028	Aotus_nancymaae
ENSCCAG00000019347	-	100	80.556	ENSBTAG00000018155	MRPS18C	100	80.556	Bos_taurus
ENSCCAG00000019347	-	100	56.944	ENSBTAG00000049836	-	100	56.944	Bos_taurus
ENSCCAG00000019347	-	100	95.139	ENSCJAG00000042247	MRPS18C	97	95.139	Callithrix_jacchus
ENSCCAG00000019347	-	100	79.861	ENSCAFG00020010491	MRPS18C	100	79.861	Canis_lupus_dingo
ENSCCAG00000019347	-	99	67.361	ENSCHIG00000018805	-	98	68.571	Capra_hircus
ENSCCAG00000019347	-	91	84.733	ENSCHIG00000004461	-	91	84.733	Capra_hircus
ENSCCAG00000019347	-	99	52.817	ENSCHIG00000016551	-	98	52.817	Capra_hircus
ENSCCAG00000019347	-	75	73.148	ENSCHIG00000019359	-	98	73.148	Capra_hircus
ENSCCAG00000019347	-	100	70.833	ENSCHIG00000022740	-	100	70.833	Capra_hircus
ENSCCAG00000019347	-	100	81.250	ENSTSYG00000012924	MRPS18C	100	81.250	Carlito_syrichta
ENSCCAG00000019347	-	100	80.556	ENSCPOG00000009198	MRPS18C	100	80.556	Cavia_porcellus
ENSCCAG00000019347	-	100	93.750	ENSCATG00000040697	MRPS18C	100	93.750	Cercocebus_atys
ENSCCAG00000019347	-	100	80.137	ENSCLAG00000008205	-	100	80.137	Chinchilla_lanigera
ENSCCAG00000019347	-	100	80.556	ENSCLAG00000017397	-	100	80.556	Chinchilla_lanigera
ENSCCAG00000019347	-	100	77.083	ENSCANG00000041165	-	100	77.083	Colobus_angolensis_palliatus
ENSCCAG00000019347	-	98	69.504	ENSCANG00000037347	-	100	65.972	Colobus_angolensis_palliatus
ENSCCAG00000019347	-	100	93.750	ENSCANG00000038907	MRPS18C	100	93.750	Colobus_angolensis_palliatus
ENSCCAG00000019347	-	100	81.250	ENSCGRG00001000103	Mrps18c	100	81.250	Cricetulus_griseus_chok1gshd
ENSCCAG00000019347	-	100	81.250	ENSCGRG00000002192	Mrps18c	100	81.250	Cricetulus_griseus_crigri
ENSCCAG00000019347	-	99	80.282	ENSDORG00000012749	Mrps18c	100	80.282	Dipodomys_ordii
ENSCCAG00000019347	-	100	52.778	ENSETEG00000012223	-	100	52.778	Echinops_telfairi
ENSCCAG00000019347	-	100	83.333	ENSEASG00005013234	MRPS18C	100	83.333	Equus_asinus_asinus
ENSCCAG00000019347	-	100	84.028	ENSECAG00000020387	MRPS18C	100	84.028	Equus_caballus
ENSCCAG00000019347	-	100	59.722	ENSEEUG00000003504	MRPS18C	99	59.722	Erinaceus_europaeus
ENSCCAG00000019347	-	100	79.861	ENSFCAG00000042464	MRPS18C	100	79.861	Felis_catus
ENSCCAG00000019347	-	100	81.250	ENSFDAG00000000250	-	100	81.250	Fukomys_damarensis
ENSCCAG00000019347	-	100	70.139	ENSFDAG00000008778	-	100	70.139	Fukomys_damarensis
ENSCCAG00000019347	-	100	63.194	ENSGGOG00000037903	-	100	63.194	Gorilla_gorilla
ENSCCAG00000019347	-	100	76.389	ENSGGOG00000008603	MRPS18C	100	76.389	Gorilla_gorilla
ENSCCAG00000019347	-	100	68.750	ENSGGOG00000040785	-	100	68.750	Gorilla_gorilla
ENSCCAG00000019347	-	100	74.306	ENSHGLG00000012671	-	98	74.306	Heterocephalus_glaber_female
ENSCCAG00000019347	-	100	76.389	ENSHGLG00000020134	-	100	76.389	Heterocephalus_glaber_female
ENSCCAG00000019347	-	100	80.137	ENSHGLG00000002953	-	100	80.137	Heterocephalus_glaber_female
ENSCCAG00000019347	-	100	80.137	ENSHGLG00100016235	-	100	80.137	Heterocephalus_glaber_male
ENSCCAG00000019347	-	100	76.389	ENSHGLG00100019678	-	100	76.389	Heterocephalus_glaber_male
ENSCCAG00000019347	-	100	74.306	ENSHGLG00100015568	-	98	74.306	Heterocephalus_glaber_male
ENSCCAG00000019347	-	100	81.944	ENSSTOG00000007989	MRPS18C	100	81.944	Ictidomys_tridecemlineatus
ENSCCAG00000019347	-	100	54.167	ENSJJAG00000022437	Mrps18c	100	54.167	Jaculus_jaculus
ENSCCAG00000019347	-	100	80.556	ENSLAFG00000001059	MRPS18C	100	80.556	Loxodonta_africana
ENSCCAG00000019347	-	100	73.611	ENSMFAG00000041276	-	100	73.611	Macaca_fascicularis
ENSCCAG00000019347	-	100	92.361	ENSMFAG00000003991	MRPS18C	100	92.361	Macaca_fascicularis
ENSCCAG00000019347	-	100	79.167	ENSMMUG00000039146	-	100	79.167	Macaca_mulatta
ENSCCAG00000019347	-	100	73.611	ENSMMUG00000015353	MRPS18C	100	73.611	Macaca_mulatta
ENSCCAG00000019347	-	100	82.639	ENSMMUG00000048717	-	100	82.639	Macaca_mulatta
ENSCCAG00000019347	-	100	70.139	ENSMNEG00000018700	-	100	70.139	Macaca_nemestrina
ENSCCAG00000019347	-	100	92.361	ENSMNEG00000043663	MRPS18C	100	92.361	Macaca_nemestrina
ENSCCAG00000019347	-	100	93.750	ENSMLEG00000038884	MRPS18C	100	93.750	Mandrillus_leucophaeus
ENSCCAG00000019347	-	100	63.194	ENSMICG00000037615	-	100	63.194	Microcebus_murinus
ENSCCAG00000019347	-	100	82.639	ENSMICG00000032609	-	100	82.639	Microcebus_murinus
ENSCCAG00000019347	-	100	79.167	ENSMOCG00000015591	-	100	79.167	Microtus_ochrogaster
ENSCCAG00000019347	-	100	77.083	ENSMOCG00000009898	-	100	77.083	Microtus_ochrogaster
ENSCCAG00000019347	-	97	71.831	ENSMODG00000020773	MRPS18C	99	71.831	Monodelphis_domestica
ENSCCAG00000019347	-	100	77.397	MGP_CAROLIEiJ_G0027458	Mrps18c	100	77.397	Mus_caroli
ENSCCAG00000019347	-	100	74.658	ENSMUSG00000016833	Mrps18c	100	74.658	Mus_musculus
ENSCCAG00000019347	-	100	77.397	MGP_PahariEiJ_G0017236	Mrps18c	100	77.397	Mus_pahari
ENSCCAG00000019347	-	83	73.770	MGP_SPRETEiJ_G0028455	Mrps18c	93	73.770	Mus_spretus
ENSCCAG00000019347	-	100	77.083	ENSMLUG00000017057	MRPS18C	100	77.083	Myotis_lucifugus
ENSCCAG00000019347	-	88	85.714	ENSNGAG00000015980	Mrps18c	100	81.250	Nannospalax_galili
ENSCCAG00000019347	-	100	91.667	ENSNLEG00000009119	MRPS18C	100	91.667	Nomascus_leucogenys
ENSCCAG00000019347	-	100	86.986	ENSNLEG00000018188	-	100	86.986	Nomascus_leucogenys
ENSCCAG00000019347	-	69	78.788	ENSOPRG00000004113	MRPS18C	68	78.788	Ochotona_princeps
ENSCCAG00000019347	-	100	77.397	ENSODEG00000007599	-	100	77.397	Octodon_degus
ENSCCAG00000019347	-	100	79.167	ENSODEG00000020349	-	100	79.167	Octodon_degus
ENSCCAG00000019347	-	100	81.944	ENSOARG00000002770	MRPS18C	100	81.944	Ovis_aries
ENSCCAG00000019347	-	100	90.972	ENSPPAG00000037122	MRPS18C	100	90.972	Pan_paniscus
ENSCCAG00000019347	-	100	63.889	ENSPPAG00000037400	-	100	63.889	Pan_paniscus
ENSCCAG00000019347	-	100	80.556	ENSPPRG00000011089	MRPS18C	100	80.556	Panthera_pardus
ENSCCAG00000019347	-	100	79.861	ENSPTIG00000021242	MRPS18C	100	79.861	Panthera_tigris_altaica
ENSCCAG00000019347	-	100	61.806	ENSPTRG00000047058	-	100	61.806	Pan_troglodytes
ENSCCAG00000019347	-	100	90.972	ENSPTRG00000016233	MRPS18C	100	90.972	Pan_troglodytes
ENSCCAG00000019347	-	100	93.056	ENSPANG00000033931	MRPS18C	100	93.056	Papio_anubis
ENSCCAG00000019347	-	100	79.167	ENSPANG00000034202	-	100	79.167	Papio_anubis
ENSCCAG00000019347	-	100	79.861	ENSPEMG00000008390	Mrps18c	100	79.861	Peromyscus_maniculatus_bairdii
ENSCCAG00000019347	-	71	88.235	ENSPCIG00000019737	-	100	88.235	Phascolarctos_cinereus
ENSCCAG00000019347	-	99	59.859	ENSPCIG00000000097	-	98	59.859	Phascolarctos_cinereus
ENSCCAG00000019347	-	92	74.436	ENSPCIG00000005376	-	94	74.436	Phascolarctos_cinereus
ENSCCAG00000019347	-	100	94.444	ENSPPYG00000025867	MRPS18C	100	94.444	Pongo_abelii
ENSCCAG00000019347	-	98	89.362	ENSPPYG00000025835	-	99	89.362	Pongo_abelii
ENSCCAG00000019347	-	100	79.861	ENSPCAG00000004975	MRPS18C	100	79.861	Procavia_capensis
ENSCCAG00000019347	-	100	84.028	ENSPCOG00000017634	MRPS18C	100	84.028	Propithecus_coquereli
ENSCCAG00000019347	-	69	79.798	ENSPVAG00000006439	MRPS18C	100	79.798	Pteropus_vampyrus
ENSCCAG00000019347	-	100	73.973	ENSRNOG00000002178	Mrps18c	100	73.973	Rattus_norvegicus
ENSCCAG00000019347	-	100	93.750	ENSRBIG00000041685	MRPS18C	100	93.750	Rhinopithecus_bieti
ENSCCAG00000019347	-	100	63.889	ENSRBIG00000031637	-	100	63.889	Rhinopithecus_bieti
ENSCCAG00000019347	-	100	80.556	ENSRBIG00000035023	-	100	80.556	Rhinopithecus_bieti
ENSCCAG00000019347	-	100	80.556	ENSRROG00000033834	-	100	80.556	Rhinopithecus_roxellana
ENSCCAG00000019347	-	100	63.194	ENSRROG00000030722	-	100	63.194	Rhinopithecus_roxellana
ENSCCAG00000019347	-	100	93.750	ENSRROG00000044334	MRPS18C	100	93.750	Rhinopithecus_roxellana
ENSCCAG00000019347	-	100	93.056	ENSSBOG00000027568	-	100	93.056	Saimiri_boliviensis_boliviensis
ENSCCAG00000019347	-	99	81.119	ENSSBOG00000022205	-	92	81.119	Saimiri_boliviensis_boliviensis
ENSCCAG00000019347	-	100	71.528	ENSSBOG00000029234	-	100	71.528	Saimiri_boliviensis_boliviensis
ENSCCAG00000019347	-	96	76.812	ENSSBOG00000032292	-	99	76.812	Saimiri_boliviensis_boliviensis
ENSCCAG00000019347	-	92	75.000	ENSSHAG00000007084	MRPS18C	94	75.000	Sarcophilus_harrisii
ENSCCAG00000019347	-	100	81.250	ENSSSCG00000038042	MRPS18C	100	81.250	Sus_scrofa
ENSCCAG00000019347	-	100	79.861	ENSTBEG00000012505	MRPS18C	100	79.861	Tupaia_belangeri
ENSCCAG00000019347	-	100	84.028	ENSTTRG00000004897	MRPS18C	100	84.028	Tursiops_truncatus
ENSCCAG00000019347	-	100	84.722	ENSUAMG00000012878	MRPS18C	100	84.722	Ursus_americanus
ENSCCAG00000019347	-	100	84.722	ENSUMAG00000008829	MRPS18C	100	84.722	Ursus_maritimus
ENSCCAG00000019347	-	100	81.944	ENSVPAG00000011358	MRPS18C	100	81.944	Vicugna_pacos
ENSCCAG00000019347	-	100	79.861	ENSVVUG00000015672	MRPS18C	100	79.861	Vulpes_vulpes