EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000019379 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 4183 bases
Position: chrKV389850.1:1478671-1482853
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000004088	THUMP	PF02926.17	6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000021075	-	465	-	ENSCCAP00000004061	154 (aa)	-	A0A2K5PKB8
ENSCCAT00000021123	-	1203	-	ENSCCAP00000004088	400 (aa)	-	A0A2K5PKB5

Gene Model

Click here to download ENSCCAG00000019379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000019379	-	86	88.669	ENSCCAG00000030205	THUMPD1	100	88.669

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019379	-	86	87.535	ENSG00000066654	THUMPD1	100	87.535	Homo_sapiens
ENSCCAG00000019379	-	66	54.924	ENSAPOG00000008440	thumpd1	88	55.682	Acanthochromis_polyacanthus
ENSCCAG00000019379	-	87	81.215	ENSAMEG00000006257	THUMPD1	100	81.215	Ailuropoda_melanoleuca
ENSCCAG00000019379	-	64	55.078	ENSACIG00000024395	thumpd1	77	56.641	Amphilophus_citrinellus
ENSCCAG00000019379	-	77	48.113	ENSAOCG00000003509	thumpd1	97	49.682	Amphiprion_ocellaris
ENSCCAG00000019379	-	77	47.950	ENSAPEG00000010515	thumpd1	97	49.521	Amphiprion_percula
ENSCCAG00000019379	-	74	52.189	ENSATEG00000004737	thumpd1	92	52.189	Anabas_testudineus
ENSCCAG00000019379	-	60	75.207	ENSAPLG00000015259	THUMPD1	85	75.620	Anas_platyrhynchos
ENSCCAG00000019379	-	71	63.545	ENSACAG00000009625	-	93	63.545	Anolis_carolinensis
ENSCCAG00000019379	-	86	88.952	ENSANAG00000026882	-	100	88.952	Aotus_nancymaae
ENSCCAG00000019379	-	85	71.884	ENSANAG00000027311	-	100	71.884	Aotus_nancymaae
ENSCCAG00000019379	-	86	74.504	ENSANAG00000027040	-	100	74.504	Aotus_nancymaae
ENSCCAG00000019379	-	64	52.874	ENSACLG00000004830	thumpd1	98	48.089	Astatotilapia_calliptera
ENSCCAG00000019379	-	81	50.915	ENSAMXG00000012356	thumpd1	98	50.915	Astyanax_mexicanus
ENSCCAG00000019379	-	86	79.832	ENSBTAG00000047673	THUMPD1	100	79.832	Bos_taurus
ENSCCAG00000019379	-	82	88.791	ENSCJAG00000009499	THUMPD1	100	88.952	Callithrix_jacchus
ENSCCAG00000019379	-	86	80.282	ENSCAFG00000017985	THUMPD1	99	80.282	Canis_familiaris
ENSCCAG00000019379	-	86	80.282	ENSCAFG00020021861	THUMPD1	99	80.282	Canis_lupus_dingo
ENSCCAG00000019379	-	86	79.832	ENSCHIG00000010134	THUMPD1	99	79.832	Capra_hircus
ENSCCAG00000019379	-	86	81.356	ENSTSYG00000011537	THUMPD1	100	81.356	Carlito_syrichta
ENSCCAG00000019379	-	82	76.540	ENSCPOG00000023684	-	100	77.183	Cavia_porcellus
ENSCCAG00000019379	-	82	76.540	ENSCPOG00000008919	-	100	77.183	Cavia_porcellus
ENSCCAG00000019379	-	86	71.989	ENSCATG00000020844	-	99	71.989	Cercocebus_atys
ENSCCAG00000019379	-	86	86.969	ENSCATG00000040309	THUMPD1	100	86.969	Cercocebus_atys
ENSCCAG00000019379	-	86	77.401	ENSCLAG00000016508	THUMPD1	100	77.401	Chinchilla_lanigera
ENSCCAG00000019379	-	88	68.120	ENSCSAG00000009860	-	82	68.120	Chlorocebus_sabaeus
ENSCCAG00000019379	-	86	86.932	ENSCSAG00000007610	THUMPD1	99	86.932	Chlorocebus_sabaeus
ENSCCAG00000019379	-	86	79.330	ENSCHOG00000005587	THUMPD1	100	79.330	Choloepus_hoffmanni
ENSCCAG00000019379	-	77	67.628	ENSCPBG00000019055	THUMPD1	88	67.628	Chrysemys_picta_bellii
ENSCCAG00000019379	-	67	86.282	ENSCANG00000038770	THUMPD1	92	86.282	Colobus_angolensis_palliatus
ENSCCAG00000019379	-	75	75.649	ENSCANG00000035822	-	100	75.649	Colobus_angolensis_palliatus
ENSCCAG00000019379	-	86	77.684	ENSCGRG00001014829	Thumpd1	100	77.684	Cricetulus_griseus_chok1gshd
ENSCCAG00000019379	-	86	77.684	ENSCGRG00000000060	Thumpd1	100	77.684	Cricetulus_griseus_crigri
ENSCCAG00000019379	-	74	50.993	ENSCSEG00000002041	thumpd1	96	51.325	Cynoglossus_semilaevis
ENSCCAG00000019379	-	63	58.984	ENSCVAG00000014960	thumpd1	87	54.610	Cyprinodon_variegatus
ENSCCAG00000019379	-	76	46.584	ENSDARG00000100264	thumpd1	93	46.605	Danio_rerio
ENSCCAG00000019379	-	86	80.726	ENSDNOG00000043510	THUMPD1	100	80.726	Dasypus_novemcinctus
ENSCCAG00000019379	-	86	74.652	ENSDORG00000028216	Thumpd1	100	74.652	Dipodomys_ordii
ENSCCAG00000019379	-	68	32.056	FBgn0035532	CG15014	94	30.488	Drosophila_melanogaster
ENSCCAG00000019379	-	89	69.542	ENSETEG00000002763	THUMPD1	88	69.519	Echinops_telfairi
ENSCCAG00000019379	-	73	39.344	ENSEBUG00000011011	THUMPD1	74	41.197	Eptatretus_burgeri
ENSCCAG00000019379	-	86	80.168	ENSECAG00000005354	THUMPD1	100	80.168	Equus_caballus
ENSCCAG00000019379	-	90	75.462	ENSEEUG00000011256	THUMPD1	92	75.726	Erinaceus_europaeus
ENSCCAG00000019379	-	65	55.172	ENSELUG00000013612	thumpd1	61	56.705	Esox_lucius
ENSCCAG00000019379	-	86	80.726	ENSFCAG00000039296	THUMPD1	100	80.726	Felis_catus
ENSCCAG00000019379	-	57	75.439	ENSFALG00000014029	THUMPD1	82	75.439	Ficedula_albicollis
ENSCCAG00000019379	-	69	51.773	ENSFHEG00000013319	thumpd1	92	48.148	Fundulus_heteroclitus
ENSCCAG00000019379	-	73	52.333	ENSGMOG00000003369	thumpd1	94	52.333	Gadus_morhua
ENSCCAG00000019379	-	77	50.470	ENSGAFG00000011000	thumpd1	97	50.784	Gambusia_affinis
ENSCCAG00000019379	-	67	55.390	ENSGACG00000019511	thumpd1	80	55.390	Gasterosteus_aculeatus
ENSCCAG00000019379	-	80	64.890	ENSGAGG00000008225	THUMPD1	98	64.890	Gopherus_agassizii
ENSCCAG00000019379	-	82	64.307	ENSGGOG00000043232	-	100	65.156	Gorilla_gorilla
ENSCCAG00000019379	-	99	76.923	ENSGGOG00000005231	-	97	76.923	Gorilla_gorilla
ENSCCAG00000019379	-	64	52.918	ENSHBUG00000017996	thumpd1	98	48.089	Haplochromis_burtoni
ENSCCAG00000019379	-	86	78.592	ENSHGLG00000011001	-	100	78.592	Heterocephalus_glaber_female
ENSCCAG00000019379	-	51	67.290	ENSHGLG00000000952	-	100	67.290	Heterocephalus_glaber_female
ENSCCAG00000019379	-	86	79.155	ENSHGLG00100016023	THUMPD1	100	79.155	Heterocephalus_glaber_male
ENSCCAG00000019379	-	51	67.290	ENSHGLG00100010577	-	100	67.290	Heterocephalus_glaber_male
ENSCCAG00000019379	-	61	52.869	ENSHCOG00000008618	thumpd1	72	44.048	Hippocampus_comes
ENSCCAG00000019379	-	64	53.906	ENSIPUG00000012500	thumpd1	60	53.488	Ictalurus_punctatus
ENSCCAG00000019379	-	86	80.508	ENSSTOG00000007011	THUMPD1	100	80.508	Ictidomys_tridecemlineatus
ENSCCAG00000019379	-	86	75.141	ENSJJAG00000004295	-	100	75.141	Jaculus_jaculus
ENSCCAG00000019379	-	64	50.000	ENSKMAG00000009545	thumpd1	63	50.000	Kryptolebias_marmoratus
ENSCCAG00000019379	-	59	59.664	ENSLBEG00000009349	thumpd1	82	55.303	Labrus_bergylta
ENSCCAG00000019379	-	81	53.005	ENSLACG00000005833	THUMPD1	98	53.005	Latimeria_chalumnae
ENSCCAG00000019379	-	58	62.393	ENSLOCG00000000854	thumpd1	75	63.248	Lepisosteus_oculatus
ENSCCAG00000019379	-	86	77.095	ENSLAFG00000025838	THUMPD1	100	77.095	Loxodonta_africana
ENSCCAG00000019379	-	75	72.347	ENSMFAG00000041474	-	100	72.347	Macaca_fascicularis
ENSCCAG00000019379	-	86	86.969	ENSMFAG00000036996	THUMPD1	100	86.969	Macaca_fascicularis
ENSCCAG00000019379	-	86	86.969	ENSMMUG00000004225	THUMPD1	100	86.969	Macaca_mulatta
ENSCCAG00000019379	-	75	72.026	ENSMMUG00000038414	-	100	72.026	Macaca_mulatta
ENSCCAG00000019379	-	75	71.704	ENSMNEG00000038856	-	100	71.704	Macaca_nemestrina
ENSCCAG00000019379	-	86	86.969	ENSMNEG00000020726	THUMPD1	100	86.969	Macaca_nemestrina
ENSCCAG00000019379	-	86	86.969	ENSMLEG00000036436	THUMPD1	100	86.969	Mandrillus_leucophaeus
ENSCCAG00000019379	-	74	71.197	ENSMLEG00000030012	-	99	71.197	Mandrillus_leucophaeus
ENSCCAG00000019379	-	69	53.929	ENSMAMG00000006858	thumpd1	92	51.792	Mastacembelus_armatus
ENSCCAG00000019379	-	64	52.918	ENSMZEG00005013693	thumpd1	98	48.089	Maylandia_zebra
ENSCCAG00000019379	-	50	75.000	ENSMGAG00000010340	THUMPD1	99	75.000	Meleagris_gallopavo
ENSCCAG00000019379	-	86	77.966	ENSMAUG00000013306	Thumpd1	100	77.966	Mesocricetus_auratus
ENSCCAG00000019379	-	85	65.043	ENSMICG00000030865	-	96	64.857	Microcebus_murinus
ENSCCAG00000019379	-	86	83.616	ENSMICG00000038483	-	100	83.616	Microcebus_murinus
ENSCCAG00000019379	-	86	77.966	ENSMOCG00000003447	Thumpd1	100	77.966	Microtus_ochrogaster
ENSCCAG00000019379	-	65	54.340	ENSMMOG00000011323	thumpd1	78	54.340	Mola_mola
ENSCCAG00000019379	-	85	68.320	ENSMODG00000006971	-	98	68.320	Monodelphis_domestica
ENSCCAG00000019379	-	85	68.044	ENSMODG00000024776	-	99	68.320	Monodelphis_domestica
ENSCCAG00000019379	-	65	56.322	ENSMALG00000019522	thumpd1	96	52.649	Monopterus_albus
ENSCCAG00000019379	-	86	75.783	MGP_CAROLIEiJ_G0030382	Thumpd1	100	75.783	Mus_caroli
ENSCCAG00000019379	-	86	76.638	ENSMUSG00000030942	Thumpd1	100	76.638	Mus_musculus
ENSCCAG00000019379	-	86	75.637	MGP_PahariEiJ_G0013593	Thumpd1	100	75.637	Mus_pahari
ENSCCAG00000019379	-	76	77.673	ENSMLUG00000010547	THUMPD1	90	77.673	Myotis_lucifugus
ENSCCAG00000019379	-	86	78.187	ENSNGAG00000018643	Thumpd1	100	78.187	Nannospalax_galili
ENSCCAG00000019379	-	71	50.352	ENSNBRG00000006987	thumpd1	90	47.950	Neolamprologus_brichardi
ENSCCAG00000019379	-	88	86.226	ENSNLEG00000012369	THUMPD1	100	86.969	Nomascus_leucogenys
ENSCCAG00000019379	-	86	64.326	ENSOPRG00000011342	THUMPD1	86	64.326	Ochotona_princeps
ENSCCAG00000019379	-	86	75.775	ENSODEG00000012360	THUMPD1	100	75.775	Octodon_degus
ENSCCAG00000019379	-	71	49.474	ENSONIG00000000146	thumpd1	96	50.877	Oreochromis_niloticus
ENSCCAG00000019379	-	86	63.736	ENSOANG00000014297	THUMPD1	100	63.736	Ornithorhynchus_anatinus
ENSCCAG00000019379	-	84	80.000	ENSOCUG00000009895	-	97	80.000	Oryctolagus_cuniculus
ENSCCAG00000019379	-	52	72.273	ENSOCUG00000025354	-	100	72.273	Oryctolagus_cuniculus
ENSCCAG00000019379	-	69	53.214	ENSORLG00000027557	thumpd1	90	53.214	Oryzias_latipes
ENSCCAG00000019379	-	59	58.298	ENSORLG00020010206	thumpd1	90	52.313	Oryzias_latipes_hni
ENSCCAG00000019379	-	59	58.298	ENSORLG00015009581	thumpd1	90	53.025	Oryzias_latipes_hsok
ENSCCAG00000019379	-	65	55.212	ENSOMEG00000019361	thumpd1	78	55.212	Oryzias_melastigma
ENSCCAG00000019379	-	86	82.203	ENSOGAG00000026723	THUMPD1	100	82.203	Otolemur_garnettii
ENSCCAG00000019379	-	86	79.609	ENSOARG00000013107	THUMPD1	99	79.609	Ovis_aries
ENSCCAG00000019379	-	96	64.484	ENSPPAG00000001653	-	96	74.434	Pan_paniscus
ENSCCAG00000019379	-	89	86.264	ENSPPAG00000033818	-	97	76.923	Pan_paniscus
ENSCCAG00000019379	-	86	81.285	ENSPPRG00000014118	-	100	81.285	Panthera_pardus
ENSCCAG00000019379	-	86	80.447	ENSPTIG00000013856	-	100	80.447	Panthera_tigris_altaica
ENSCCAG00000019379	-	89	85.989	ENSPTRG00000007848	THUMPD1	97	76.690	Pan_troglodytes
ENSCCAG00000019379	-	82	67.552	ENSPTRG00000046073	-	100	68.272	Pan_troglodytes
ENSCCAG00000019379	-	86	86.686	ENSPANG00000025507	THUMPD1	100	86.686	Papio_anubis
ENSCCAG00000019379	-	74	71.290	ENSPANG00000034881	-	99	71.290	Papio_anubis
ENSCCAG00000019379	-	59	63.404	ENSPKIG00000014491	thumpd1	73	63.404	Paramormyrops_kingsleyae
ENSCCAG00000019379	-	68	71.218	ENSPSIG00000012430	THUMPD1	93	71.218	Pelodiscus_sinensis
ENSCCAG00000019379	-	58	57.692	ENSPMGG00000014479	thumpd1	82	57.692	Periophthalmus_magnuspinnatus
ENSCCAG00000019379	-	56	58.798	ENSPEMG00000002608	-	99	59.227	Peromyscus_maniculatus_bairdii
ENSCCAG00000019379	-	52	50.000	ENSPMAG00000001389	thumpd1	96	49.754	Petromyzon_marinus
ENSCCAG00000019379	-	86	68.044	ENSPCIG00000029241	THUMPD1	72	68.044	Phascolarctos_cinereus
ENSCCAG00000019379	-	77	50.629	ENSPFOG00000012649	thumpd1	97	50.943	Poecilia_formosa
ENSCCAG00000019379	-	77	50.158	ENSPLAG00000000137	thumpd1	97	50.473	Poecilia_latipinna
ENSCCAG00000019379	-	77	50.789	ENSPMEG00000007750	thumpd1	97	51.104	Poecilia_mexicana
ENSCCAG00000019379	-	65	55.894	ENSPREG00000000144	thumpd1	88	56.274	Poecilia_reticulata
ENSCCAG00000019379	-	67	86.957	ENSPPYG00000007160	-	100	86.957	Pongo_abelii
ENSCCAG00000019379	-	67	74.468	ENSPCAG00000001534	THUMPD1	100	74.468	Procavia_capensis
ENSCCAG00000019379	-	86	83.333	ENSPCOG00000024663	THUMPD1	100	83.333	Propithecus_coquereli
ENSCCAG00000019379	-	52	67.411	ENSPVAG00000003286	-	99	67.411	Pteropus_vampyrus
ENSCCAG00000019379	-	86	71.944	ENSPVAG00000005659	-	100	71.944	Pteropus_vampyrus
ENSCCAG00000019379	-	64	52.918	ENSPNYG00000007061	thumpd1	96	48.243	Pundamilia_nyererei
ENSCCAG00000019379	-	72	52.333	ENSPNAG00000024872	thumpd1	91	54.082	Pygocentrus_nattereri
ENSCCAG00000019379	-	52	72.727	ENSRNOG00000014946	AABR07005588.1	100	72.727	Rattus_norvegicus
ENSCCAG00000019379	-	75	75.082	ENSRBIG00000040136	-	100	75.082	Rhinopithecus_bieti
ENSCCAG00000019379	-	86	86.686	ENSRBIG00000040752	THUMPD1	100	86.686	Rhinopithecus_bieti
ENSCCAG00000019379	-	75	75.082	ENSRROG00000045699	-	100	75.082	Rhinopithecus_roxellana
ENSCCAG00000019379	-	86	86.969	ENSRROG00000042189	THUMPD1	100	86.969	Rhinopithecus_roxellana
ENSCCAG00000019379	-	86	88.669	ENSSBOG00000034246	THUMPD1	100	88.669	Saimiri_boliviensis_boliviensis
ENSCCAG00000019379	-	86	67.877	ENSSHAG00000003853	THUMPD1	99	67.877	Sarcophilus_harrisii
ENSCCAG00000019379	-	71	50.000	ENSSFOG00015007512	thumpd1	89	48.993	Scleropages_formosus
ENSCCAG00000019379	-	65	55.385	ENSSMAG00000000723	thumpd1	79	55.385	Scophthalmus_maximus
ENSCCAG00000019379	-	74	49.511	ENSSDUG00000014502	thumpd1	95	51.140	Seriola_dumerili
ENSCCAG00000019379	-	74	49.837	ENSSLDG00000007694	thumpd1	95	51.466	Seriola_lalandi_dorsalis
ENSCCAG00000019379	-	73	65.584	ENSSPUG00000005096	THUMPD1	85	75.817	Sphenodon_punctatus
ENSCCAG00000019379	-	78	48.882	ENSSPAG00000006993	thumpd1	97	49.201	Stegastes_partitus
ENSCCAG00000019379	-	86	79.666	ENSSSCG00000024748	THUMPD1	100	79.666	Sus_scrofa
ENSCCAG00000019379	-	64	70.611	ENSTGUG00000009247	THUMPD1	95	70.611	Taeniopygia_guttata
ENSCCAG00000019379	-	75	49.367	ENSTRUG00000015656	thumpd1	98	49.684	Takifugu_rubripes
ENSCCAG00000019379	-	64	55.814	ENSTNIG00000001584	thumpd1	84	56.202	Tetraodon_nigroviridis
ENSCCAG00000019379	-	94	74.677	ENSTBEG00000005252	THUMPD1	96	74.677	Tupaia_belangeri
ENSCCAG00000019379	-	86	79.888	ENSTTRG00000016435	THUMPD1	100	79.888	Tursiops_truncatus
ENSCCAG00000019379	-	52	70.089	ENSUAMG00000005779	-	100	70.089	Ursus_americanus
ENSCCAG00000019379	-	86	78.873	ENSVPAG00000003422	THUMPD1	100	78.873	Vicugna_pacos
ENSCCAG00000019379	-	86	80.112	ENSVVUG00000023241	THUMPD1	99	80.112	Vulpes_vulpes
ENSCCAG00000019379	-	69	56.071	ENSXETG00000005539	thumpd1	95	56.584	Xenopus_tropicalis
ENSCCAG00000019379	-	66	54.307	ENSXMAG00000026052	thumpd1	83	54.682	Xiphophorus_maculatus