EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000019480 (Gene tree)
Gene ID: 108296807
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 22995 bases
Position: chrKV390167.1:88041-111035
Accession: 108296807
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000004249	MMR_HSR1	PF01926.23	0.00012	1	1
ENSCCAP00000004211	MMR_HSR1	PF01926.23	0.00021	1	1
ENSCCAP00000004277	MMR_HSR1	PF01926.23	0.00021	1	1
ENSCCAP00000004287	MMR_HSR1	PF01926.23	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000021411	RAB5B-204	995	-	ENSCCAP00000004277	215 (aa)	-	A0A2K5PKZ0
ENSCCAT00000021375	RAB5B-203	492	-	ENSCCAP00000004249	163 (aa)	-	A0A2K5PKS3
ENSCCAT00000021337	RAB5B-202	4709	-	ENSCCAP00000004222	227 (aa)	-	A0A2K5PKT0
ENSCCAT00000021446	RAB5B-207	222	-	ENSCCAP00000004304	73 (aa)	-	A0A2K5PKX9
ENSCCAT00000021320	RAB5B-201	4566	XM_017519404	ENSCCAP00000004211	215 (aa)	XP_017374893	A0A2K5PKZ0
ENSCCAT00000021424	RAB5B-205	669	-	ENSCCAP00000004287	222 (aa)	-	A0A2K5PL05
ENSCCAT00000021437	RAB5B-206	525	-	ENSCCAP00000004296	174 (aa)	-	A0A2K5PKZ8

Gene Model

Click here to download ENSCCAG00000019480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019480's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000019480	RAB5B	80	42.222	ENSCCAG00000006762	RAB18	94	39.901
ENSCCAG00000019480	RAB5B	90	42.268	ENSCCAG00000021869	RAB1A	95	42.268
ENSCCAG00000019480	RAB5B	80	37.879	ENSCCAG00000030469	RAB39B	80	35.882
ENSCCAG00000019480	RAB5B	91	42.718	ENSCCAG00000031042	RAB11B	94	42.718
ENSCCAG00000019480	RAB5B	88	32.105	ENSCCAG00000026041	-	96	32.105
ENSCCAG00000019480	RAB5B	75	49.593	ENSCCAG00000021286	RAB11A	75	47.205
ENSCCAG00000019480	RAB5B	90	47.938	ENSCCAG00000030930	RAB22A	98	47.938
ENSCCAG00000019480	RAB5B	90	37.949	ENSCCAG00000031720	RAB35	96	37.949
ENSCCAG00000019480	RAB5B	82	32.768	ENSCCAG00000030751	RHEB	93	32.768
ENSCCAG00000019480	RAB5B	72	31.967	ENSCCAG00000007022	ARL8A	73	30.282
ENSCCAG00000019480	RAB5B	80	33.582	ENSCCAG00000026139	RERG	84	31.765
ENSCCAG00000019480	RAB5B	78	37.143	ENSCCAG00000017812	RAB9B	85	37.143
ENSCCAG00000019480	RAB5B	97	85.646	ENSCCAG00000025940	RAB5C	97	85.646
ENSCCAG00000019480	RAB5B	71	39.130	ENSCCAG00000025944	-	50	39.130
ENSCCAG00000019480	RAB5B	75	43.478	ENSCCAG00000025945	RAB2A	76	43.478
ENSCCAG00000019480	RAB5B	82	33.880	ENSCCAG00000031453	HRAS	96	33.880
ENSCCAG00000019480	RAB5B	93	35.294	ENSCCAG00000017991	RAB9A	99	35.294
ENSCCAG00000019480	RAB5B	77	35.714	ENSCCAG00000020364	RAB23	67	37.500
ENSCCAG00000019480	RAB5B	81	31.492	ENSCCAG00000030765	-	96	31.148
ENSCCAG00000019480	RAB5B	75	44.720	ENSCCAG00000020267	RAB14	75	44.720
ENSCCAG00000019480	RAB5B	77	31.579	ENSCCAG00000028492	ARL8B	73	30.986
ENSCCAG00000019480	RAB5B	75	38.554	ENSCCAG00000035680	RAB33A	70	38.554
ENSCCAG00000019480	RAB5B	82	36.932	ENSCCAG00000033681	RAB15	82	41.837
ENSCCAG00000019480	RAB5B	75	46.341	ENSCCAG00000026824	RAB30	83	42.857
ENSCCAG00000019480	RAB5B	76	49.194	ENSCCAG00000021540	RAB1B	81	46.626
ENSCCAG00000019480	RAB5B	77	32.335	ENSCCAG00000031963	KRAS	90	31.579
ENSCCAG00000019480	RAB5B	96	36.076	ENSCCAG00000022862	RAB12	77	34.574
ENSCCAG00000019480	RAB5B	71	43.478	ENSCCAG00000028745	RAB2B	75	39.098
ENSCCAG00000019480	RAB5B	78	42.442	ENSCCAG00000036322	RAB7A	86	43.293
ENSCCAG00000019480	RAB5B	83	39.130	ENSCCAG00000019859	RAB33B	79	39.344
ENSCCAG00000019480	RAB5B	100	81.860	ENSCCAG00000022405	RAB5A	100	81.860
ENSCCAG00000019480	RAB5B	89	37.500	ENSCCAG00000028502	-	95	37.500
ENSCCAG00000019480	RAB5B	78	45.669	ENSCCAG00000035269	RAB6B	80	45.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019480	RAB5B	100	99.070	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSCCAG00000019480	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSCCAG00000019480	RAB5B	100	95.814	ENSACAG00000005380	RAB5B	100	95.814	Anolis_carolinensis
ENSCCAG00000019480	RAB5B	100	99.070	ENSANAG00000033215	RAB5B	95	99.070	Aotus_nancymaae
ENSCCAG00000019480	RAB5B	100	98.605	ENSBTAG00000014129	RAB5B	100	98.605	Bos_taurus
ENSCCAG00000019480	RAB5B	100	99.070	ENSCJAG00000041780	RAB5B	95	99.070	Callithrix_jacchus
ENSCCAG00000019480	RAB5B	100	99.070	ENSCAFG00000000087	RAB5B	100	99.070	Canis_familiaris
ENSCCAG00000019480	RAB5B	100	99.070	ENSCAFG00020026094	RAB5B	100	99.070	Canis_lupus_dingo
ENSCCAG00000019480	RAB5B	97	99.038	ENSCHIG00000010333	RAB5B	96	99.038	Capra_hircus
ENSCCAG00000019480	RAB5B	100	98.605	ENSTSYG00000009576	RAB5B	100	98.605	Carlito_syrichta
ENSCCAG00000019480	RAB5B	100	99.070	ENSCPOG00000034818	RAB5B	100	99.070	Cavia_porcellus
ENSCCAG00000019480	RAB5B	90	100.000	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSCCAG00000019480	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSCCAG00000019480	RAB5B	100	95.349	ENSCPBG00000012712	RAB5B	100	95.349	Chrysemys_picta_bellii
ENSCCAG00000019480	RAB5B	100	98.605	ENSCGRG00001000428	Rab5b	100	98.605	Cricetulus_griseus_chok1gshd
ENSCCAG00000019480	RAB5B	100	98.605	ENSCGRG00000009508	-	100	98.605	Cricetulus_griseus_crigri
ENSCCAG00000019480	RAB5B	100	99.070	ENSDORG00000025063	Rab5b	100	99.070	Dipodomys_ordii
ENSCCAG00000019480	RAB5B	100	98.605	ENSECAG00000023306	RAB5B	100	98.605	Equus_caballus
ENSCCAG00000019480	RAB5B	100	100.000	ENSEEUG00000006745	RAB5B	100	100.000	Erinaceus_europaeus
ENSCCAG00000019480	RAB5B	100	99.070	ENSFDAG00000008326	RAB5B	100	99.070	Fukomys_damarensis
ENSCCAG00000019480	RAB5B	100	98.140	ENSHGLG00000005995	RAB5B	100	98.140	Heterocephalus_glaber_female
ENSCCAG00000019480	RAB5B	100	98.140	ENSHGLG00100012955	RAB5B	100	98.140	Heterocephalus_glaber_male
ENSCCAG00000019480	RAB5B	100	97.674	ENSSTOG00000010536	RAB5B	100	97.674	Ictidomys_tridecemlineatus
ENSCCAG00000019480	RAB5B	100	98.605	ENSJJAG00000019506	Rab5b	100	98.605	Jaculus_jaculus
ENSCCAG00000019480	RAB5B	100	98.157	ENSLAFG00000018009	RAB5B	95	98.157	Loxodonta_africana
ENSCCAG00000019480	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSCCAG00000019480	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSCCAG00000019480	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSCCAG00000019480	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSCCAG00000019480	RAB5B	100	99.070	ENSMAUG00000011613	Rab5b	100	99.070	Mesocricetus_auratus
ENSCCAG00000019480	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSCCAG00000019480	RAB5B	100	99.070	ENSMUSG00000000711	Rab5b	100	99.070	Mus_musculus
ENSCCAG00000019480	RAB5B	100	99.070	MGP_PahariEiJ_G0031135	Rab5b	100	99.070	Mus_pahari
ENSCCAG00000019480	RAB5B	100	98.605	MGP_SPRETEiJ_G0016774	Rab5b	100	98.605	Mus_spretus
ENSCCAG00000019480	RAB5B	99	97.685	ENSMPUG00000000946	RAB5B	89	97.685	Mustela_putorius_furo
ENSCCAG00000019480	RAB5B	100	99.070	ENSNLEG00000017570	-	100	99.070	Nomascus_leucogenys
ENSCCAG00000019480	RAB5B	100	99.070	ENSOPRG00000007883	RAB5B	100	99.070	Ochotona_princeps
ENSCCAG00000019480	RAB5B	100	98.605	ENSODEG00000003860	RAB5B	100	98.605	Octodon_degus
ENSCCAG00000019480	RAB5B	100	99.070	ENSOCUG00000013895	RAB5B	95	99.070	Oryctolagus_cuniculus
ENSCCAG00000019480	RAB5B	100	99.070	ENSOARG00000010651	RAB5B	95	99.070	Ovis_aries
ENSCCAG00000019480	RAB5B	100	99.070	ENSPPAG00000035431	RAB5B	100	99.070	Pan_paniscus
ENSCCAG00000019480	RAB5B	100	99.070	ENSPTRG00000005071	RAB5B	97	98.565	Pan_troglodytes
ENSCCAG00000019480	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSCCAG00000019480	RAB5B	100	99.070	ENSPCOG00000016461	RAB5B	100	99.070	Propithecus_coquereli
ENSCCAG00000019480	RAB5B	100	98.140	ENSRNOG00000006130	Rab5b	100	98.140	Rattus_norvegicus
ENSCCAG00000019480	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSCCAG00000019480	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSCCAG00000019480	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSCCAG00000019480	RAB5B	100	97.674	ENSSHAG00000007727	RAB5B	100	97.674	Sarcophilus_harrisii
ENSCCAG00000019480	RAB5B	100	99.070	ENSSARG00000006237	RAB5B	100	99.070	Sorex_araneus
ENSCCAG00000019480	RAB5B	100	95.349	ENSSPUG00000014873	RAB5B	100	95.349	Sphenodon_punctatus
ENSCCAG00000019480	RAB5B	100	99.070	ENSTTRG00000015001	RAB5B	100	99.070	Tursiops_truncatus
ENSCCAG00000019480	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSCCAG00000019480	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSCCAG00000019480	RAB5B	94	98.039	ENSVVUG00000022054	RAB5B	85	98.039	Vulpes_vulpes