EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000019771 (Gene tree)
Gene ID: 108318646
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 8
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 30550 bases
Position: chrKV389648.1:1556470-1587019
Accession: 108318646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000004521	zf-CCCH	PF00642.24	1.9e-11	1	2
ENSCCAP00000004521	zf-CCCH	PF00642.24	1.9e-11	2	2
ENSCCAP00000004527	zf-CCCH	PF00642.24	2.1e-11	1	2
ENSCCAP00000004527	zf-CCCH	PF00642.24	2.1e-11	2	2
ENSCCAP00000004521	zf-CCCH_2	PF14608.6	1.8e-06	1	3
ENSCCAP00000004521	zf-CCCH_2	PF14608.6	1.8e-06	2	3
ENSCCAP00000004521	zf-CCCH_2	PF14608.6	1.8e-06	3	3
ENSCCAP00000004527	zf-CCCH_2	PF14608.6	2e-06	1	3
ENSCCAP00000004527	zf-CCCH_2	PF14608.6	2e-06	2	3
ENSCCAP00000004527	zf-CCCH_2	PF14608.6	2e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000021709	-	867	XM_017549825	ENSCCAP00000004521	288 (aa)	XP_017405314	A0A2K5PLL4
ENSCCAT00000021716	-	885	XM_017549824	ENSCCAP00000004527	294 (aa)	XP_017405313	A0A2K5PLQ3

Gene Model

Click here to download ENSCCAG00000019771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019771's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000019771	-	100	96.528	ENSCCAG00000034286	-	100	96.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019771	-	100	90.847	ENSG00000144161	ZC3H8	100	90.847	Homo_sapiens
ENSCCAG00000019771	-	81	80.488	ENSAMEG00000016207	ZC3H8	99	80.488	Ailuropoda_melanoleuca
ENSCCAG00000019771	-	100	97.222	ENSANAG00000022151	ZC3H8	100	97.222	Aotus_nancymaae
ENSCCAG00000019771	-	99	74.587	ENSBTAG00000015965	ZC3H8	99	74.587	Bos_taurus
ENSCCAG00000019771	-	100	97.917	ENSCJAG00000040629	ZC3H8	100	97.917	Callithrix_jacchus
ENSCCAG00000019771	-	99	80.592	ENSCAFG00000007155	ZC3H8	77	80.592	Canis_familiaris
ENSCCAG00000019771	-	99	80.592	ENSCAFG00020017540	ZC3H8	92	80.592	Canis_lupus_dingo
ENSCCAG00000019771	-	99	72.727	ENSCHIG00000012152	ZC3H8	99	72.727	Capra_hircus
ENSCCAG00000019771	-	99	82.450	ENSTSYG00000006668	ZC3H8	99	82.450	Carlito_syrichta
ENSCCAG00000019771	-	91	72.857	ENSCPOG00000008258	ZC3H8	100	72.857	Cavia_porcellus
ENSCCAG00000019771	-	100	90.169	ENSCATG00000031295	ZC3H8	100	90.169	Cercocebus_atys
ENSCCAG00000019771	-	100	73.856	ENSCLAG00000006848	ZC3H8	100	73.856	Chinchilla_lanigera
ENSCCAG00000019771	-	84	89.960	ENSCSAG00000016801	ZC3H8	98	89.960	Chlorocebus_sabaeus
ENSCCAG00000019771	-	91	65.818	ENSCHOG00000010391	ZC3H8	100	65.818	Choloepus_hoffmanni
ENSCCAG00000019771	-	100	67.333	ENSCANG00000014691	ZC3H8	100	67.333	Colobus_angolensis_palliatus
ENSCCAG00000019771	-	100	73.203	ENSCGRG00001018353	Zc3h8	100	73.203	Cricetulus_griseus_chok1gshd
ENSCCAG00000019771	-	100	73.203	ENSCGRG00000016191	Zc3h8	100	73.203	Cricetulus_griseus_crigri
ENSCCAG00000019771	-	100	75.082	ENSDORG00000029341	Zc3h8	100	75.082	Dipodomys_ordii
ENSCCAG00000019771	-	100	58.333	ENSETEG00000016560	ZC3H8	100	58.333	Echinops_telfairi
ENSCCAG00000019771	-	99	81.579	ENSEASG00005006490	ZC3H8	99	81.579	Equus_asinus_asinus
ENSCCAG00000019771	-	99	81.908	ENSECAG00000022765	ZC3H8	99	81.908	Equus_caballus
ENSCCAG00000019771	-	100	69.707	ENSEEUG00000006984	ZC3H8	100	69.707	Erinaceus_europaeus
ENSCCAG00000019771	-	99	78.758	ENSFCAG00000008088	ZC3H8	99	78.758	Felis_catus
ENSCCAG00000019771	-	100	74.837	ENSFDAG00000001021	ZC3H8	100	74.837	Fukomys_damarensis
ENSCCAG00000019771	-	100	90.169	ENSGGOG00000009004	ZC3H8	100	90.169	Gorilla_gorilla
ENSCCAG00000019771	-	100	72.524	ENSHGLG00000008367	ZC3H8	100	72.524	Heterocephalus_glaber_female
ENSCCAG00000019771	-	56	82.249	ENSHGLG00100017277	-	100	82.249	Heterocephalus_glaber_male
ENSCCAG00000019771	-	100	79.085	ENSSTOG00000006347	ZC3H8	100	79.085	Ictidomys_tridecemlineatus
ENSCCAG00000019771	-	100	76.316	ENSLAFG00000004675	ZC3H8	100	76.316	Loxodonta_africana
ENSCCAG00000019771	-	100	90.508	ENSMFAG00000031522	ZC3H8	100	90.508	Macaca_fascicularis
ENSCCAG00000019771	-	100	90.847	ENSMMUG00000044163	ZC3H8	100	90.847	Macaca_mulatta
ENSCCAG00000019771	-	100	90.508	ENSMNEG00000034502	ZC3H8	100	90.508	Macaca_nemestrina
ENSCCAG00000019771	-	100	89.831	ENSMLEG00000029980	ZC3H8	100	89.831	Mandrillus_leucophaeus
ENSCCAG00000019771	-	100	72.549	ENSMAUG00000012509	Zc3h8	100	72.549	Mesocricetus_auratus
ENSCCAG00000019771	-	100	83.333	ENSMICG00000045551	ZC3H8	100	83.333	Microcebus_murinus
ENSCCAG00000019771	-	100	73.770	ENSMOCG00000015035	Zc3h8	100	73.770	Microtus_ochrogaster
ENSCCAG00000019771	-	100	71.569	MGP_CAROLIEiJ_G0024276	Zc3h8	100	71.569	Mus_caroli
ENSCCAG00000019771	-	100	72.549	ENSMUSG00000027387	Zc3h8	100	72.549	Mus_musculus
ENSCCAG00000019771	-	100	71.569	MGP_PahariEiJ_G0025721	Zc3h8	100	71.569	Mus_pahari
ENSCCAG00000019771	-	100	70.915	MGP_SPRETEiJ_G0025196	Zc3h8	100	70.915	Mus_spretus
ENSCCAG00000019771	-	99	77.419	ENSMPUG00000009562	ZC3H8	99	77.419	Mustela_putorius_furo
ENSCCAG00000019771	-	90	73.381	ENSMLUG00000004890	ZC3H8	100	72.598	Myotis_lucifugus
ENSCCAG00000019771	-	100	72.549	ENSNGAG00000010427	Zc3h8	100	72.549	Nannospalax_galili
ENSCCAG00000019771	-	100	91.186	ENSNLEG00000001619	ZC3H8	100	91.186	Nomascus_leucogenys
ENSCCAG00000019771	-	89	73.626	ENSOPRG00000011183	ZC3H8	98	73.626	Ochotona_princeps
ENSCCAG00000019771	-	100	69.935	ENSODEG00000006594	ZC3H8	100	69.935	Octodon_degus
ENSCCAG00000019771	-	99	81.126	ENSOCUG00000011253	ZC3H8	88	81.126	Oryctolagus_cuniculus
ENSCCAG00000019771	-	100	75.000	ENSOGAG00000002554	ZC3H8	100	76.923	Otolemur_garnettii
ENSCCAG00000019771	-	99	76.238	ENSOARG00000014475	ZC3H8	99	76.238	Ovis_aries
ENSCCAG00000019771	-	100	90.169	ENSPPAG00000028071	ZC3H8	100	90.169	Pan_paniscus
ENSCCAG00000019771	-	99	79.085	ENSPPRG00000005648	ZC3H8	99	79.085	Panthera_pardus
ENSCCAG00000019771	-	99	79.085	ENSPTIG00000016697	ZC3H8	99	79.085	Panthera_tigris_altaica
ENSCCAG00000019771	-	100	90.169	ENSPTRG00000012362	ZC3H8	100	90.169	Pan_troglodytes
ENSCCAG00000019771	-	100	90.169	ENSPANG00000016995	ZC3H8	100	90.169	Papio_anubis
ENSCCAG00000019771	-	97	69.935	ENSPEMG00000011068	Zc3h8	97	69.935	Peromyscus_maniculatus_bairdii
ENSCCAG00000019771	-	99	90.476	ENSPPYG00000012165	ZC3H8	99	90.476	Pongo_abelii
ENSCCAG00000019771	-	100	57.285	ENSPCAG00000015426	ZC3H8	100	57.285	Procavia_capensis
ENSCCAG00000019771	-	100	83.660	ENSPCOG00000021690	ZC3H8	100	83.660	Propithecus_coquereli
ENSCCAG00000019771	-	72	81.437	ENSPVAG00000003510	ZC3H8	72	81.437	Pteropus_vampyrus
ENSCCAG00000019771	-	100	70.915	ENSRNOG00000017647	Zc3h8	100	70.915	Rattus_norvegicus
ENSCCAG00000019771	-	100	90.169	ENSRBIG00000027345	ZC3H8	100	90.169	Rhinopithecus_bieti
ENSCCAG00000019771	-	100	90.508	ENSRROG00000039459	ZC3H8	100	90.508	Rhinopithecus_roxellana
ENSCCAG00000019771	-	100	94.218	ENSSBOG00000028167	ZC3H8	100	94.218	Saimiri_boliviensis_boliviensis
ENSCCAG00000019771	-	85	70.656	ENSSARG00000012883	ZC3H8	99	69.176	Sorex_araneus
ENSCCAG00000019771	-	84	74.809	ENSSSCG00000008099	ZC3H8	97	75.573	Sus_scrofa
ENSCCAG00000019771	-	60	86.667	ENSTBEG00000015547	-	68	86.667	Tupaia_belangeri
ENSCCAG00000019771	-	84	74.144	ENSTTRG00000013153	ZC3H8	85	76.806	Tursiops_truncatus
ENSCCAG00000019771	-	99	77.961	ENSUAMG00000002411	ZC3H8	99	77.961	Ursus_americanus
ENSCCAG00000019771	-	99	78.947	ENSUMAG00000008665	ZC3H8	99	78.947	Ursus_maritimus
ENSCCAG00000019771	-	100	77.778	ENSVPAG00000005911	ZC3H8	100	79.412	Vicugna_pacos
ENSCCAG00000019771	-	99	80.263	ENSVVUG00000028659	ZC3H8	99	80.263	Vulpes_vulpes