EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000019831 (Gene tree)
Gene ID: 108285343
Gene Symbol: ERCC2
Alias: EM9|MAG|MGC102762|MGC126218|MGC126219|TFIIH|XPD
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 21233 bases
Position: chrKV389722.1:1745684-1766916
Accession: 108285343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005430	ResIII	PF04851.15	7.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000022727	ERCC2-203	2250	-	ENSCCAP00000005402	749 (aa)	-	A0A2K5PP43
ENSCCAT00000022760	ERCC2-204	2076	-	ENSCCAP00000005430	691 (aa)	-	A0A2K5PP73
ENSCCAT00000022633	ERCC2-201	2789	XM_017502453	ENSCCAP00000005314	760 (aa)	XP_017357942	A0A2K5PNT8
ENSCCAT00000022775	ERCC2-205	1557	-	ENSCCAP00000005441	518 (aa)	-	A0A2K5PP98
ENSCCAT00000022718	ERCC2-202	2313	-	ENSCCAP00000005394	770 (aa)	-	A0A2K5PP23

Gene Model

Click here to download ENSCCAG00000019831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000019831	ERCC2	80	35.821	ENSCCAG00000024685	BRIP1	58	35.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019831	ERCC2	99	99.160	ENSG00000104884	ERCC2	99	99.502	Homo_sapiens
ENSCCAG00000019831	ERCC2	97	82.186	ENSAPOG00000000375	ercc2	99	82.186	Acanthochromis_polyacanthus
ENSCCAG00000019831	ERCC2	99	82.602	ENSACIG00000008002	ercc2	99	82.602	Amphilophus_citrinellus
ENSCCAG00000019831	ERCC2	97	80.775	ENSAOCG00000016153	ercc2	99	80.775	Amphiprion_ocellaris
ENSCCAG00000019831	ERCC2	97	80.775	ENSAPEG00000016712	ercc2	99	80.775	Amphiprion_percula
ENSCCAG00000019831	ERCC2	99	82.456	ENSATEG00000005268	ercc2	99	82.456	Anabas_testudineus
ENSCCAG00000019831	ERCC2	99	96.934	ENSANAG00000022694	ERCC2	99	96.934	Aotus_nancymaae
ENSCCAG00000019831	ERCC2	97	82.784	ENSACLG00000017573	ercc2	99	82.784	Astatotilapia_calliptera
ENSCCAG00000019831	ERCC2	97	82.212	ENSAMXG00000009052	ercc2	99	82.212	Astyanax_mexicanus
ENSCCAG00000019831	ERCC2	99	96.934	ENSCJAG00000012716	ERCC2	99	96.934	Callithrix_jacchus
ENSCCAG00000019831	ERCC2	80	35.821	ENSCJAG00000001292	BRIP1	65	35.821	Callithrix_jacchus
ENSCCAG00000019831	ERCC2	99	96.350	ENSCAFG00020011390	ERCC2	99	96.350	Canis_lupus_dingo
ENSCCAG00000019831	ERCC2	96	78.496	ENSTSYG00000026723	ERCC2	99	78.496	Carlito_syrichta
ENSCCAG00000019831	ERCC2	99	97.080	ENSCANG00000040683	ERCC2	99	97.080	Colobus_angolensis_palliatus
ENSCCAG00000019831	ERCC2	97	77.728	ENSCSEG00000006041	ercc2	99	77.728	Cynoglossus_semilaevis
ENSCCAG00000019831	ERCC2	99	92.847	ENSEASG00005013856	ERCC2	99	92.847	Equus_asinus_asinus
ENSCCAG00000019831	ERCC2	97	81.642	ENSELUG00000018055	ercc2	100	81.642	Esox_lucius
ENSCCAG00000019831	ERCC2	99	96.204	ENSFCAG00000002679	ERCC2	99	96.204	Felis_catus
ENSCCAG00000019831	ERCC2	99	82.310	ENSFHEG00000000072	ercc2	99	82.310	Fundulus_heteroclitus
ENSCCAG00000019831	ERCC2	99	81.768	ENSGAGG00000009493	ERCC2	99	81.768	Gopherus_agassizii
ENSCCAG00000019831	ERCC2	99	97.080	ENSGGOG00000015842	ERCC2	99	97.080	Gorilla_gorilla
ENSCCAG00000019831	ERCC2	97	81.994	ENSHBUG00000002187	ercc2	99	81.994	Haplochromis_burtoni
ENSCCAG00000019831	ERCC2	99	81.433	ENSLBEG00000010573	ercc2	92	81.433	Labrus_bergylta
ENSCCAG00000019831	ERCC2	99	97.080	ENSMFAG00000037898	ERCC2	99	97.080	Macaca_fascicularis
ENSCCAG00000019831	ERCC2	99	97.080	ENSMMUG00000014419	ERCC2	99	97.080	Macaca_mulatta
ENSCCAG00000019831	ERCC2	99	97.080	ENSMNEG00000042641	ERCC2	99	97.080	Macaca_nemestrina
ENSCCAG00000019831	ERCC2	82	35.821	ENSMNEG00000040728	BRIP1	55	35.821	Macaca_nemestrina
ENSCCAG00000019831	ERCC2	99	97.072	ENSMLEG00000043492	ERCC2	99	97.072	Mandrillus_leucophaeus
ENSCCAG00000019831	ERCC2	99	82.164	ENSMAMG00000016724	ercc2	99	82.164	Mastacembelus_armatus
ENSCCAG00000019831	ERCC2	97	82.810	ENSMZEG00005024441	ercc2	99	82.810	Maylandia_zebra
ENSCCAG00000019831	ERCC2	99	96.204	ENSMICG00000000635	ERCC2	99	96.204	Microcebus_murinus
ENSCCAG00000019831	ERCC2	99	79.386	ENSMMOG00000005162	ercc2	99	79.386	Mola_mola
ENSCCAG00000019831	ERCC2	99	80.994	ENSMALG00000005990	ercc2	99	80.994	Monopterus_albus
ENSCCAG00000019831	ERCC2	99	95.328	MGP_CAROLIEiJ_G0029287	Ercc2	99	95.328	Mus_caroli
ENSCCAG00000019831	ERCC2	99	95.328	ENSMUSG00000030400	Ercc2	99	95.328	Mus_musculus
ENSCCAG00000019831	ERCC2	99	95.328	MGP_PahariEiJ_G0021147	Ercc2	99	95.328	Mus_pahari
ENSCCAG00000019831	ERCC2	99	95.182	MGP_SPRETEiJ_G0030371	Ercc2	99	95.182	Mus_spretus
ENSCCAG00000019831	ERCC2	99	97.080	ENSPPAG00000044005	ERCC2	99	97.080	Pan_paniscus
ENSCCAG00000019831	ERCC2	99	90.511	ENSPPRG00000000507	ERCC2	99	90.949	Panthera_pardus
ENSCCAG00000019831	ERCC2	99	97.080	ENSPTRG00000011149	ERCC2	99	97.080	Pan_troglodytes
ENSCCAG00000019831	ERCC2	99	97.072	ENSPANG00000032195	ERCC2	99	97.072	Papio_anubis
ENSCCAG00000019831	ERCC2	99	77.632	ENSPKIG00000006883	ercc2	98	77.632	Paramormyrops_kingsleyae
ENSCCAG00000019831	ERCC2	97	81.614	ENSPMGG00000000223	ercc2	99	81.614	Periophthalmus_magnuspinnatus
ENSCCAG00000019831	ERCC2	99	82.456	ENSPLAG00000002626	ercc2	99	82.456	Poecilia_latipinna
ENSCCAG00000019831	ERCC2	99	82.456	ENSPMEG00000002858	ercc2	99	82.456	Poecilia_mexicana
ENSCCAG00000019831	ERCC2	99	77.924	ENSPREG00000019280	ercc2	99	77.924	Poecilia_reticulata
ENSCCAG00000019831	ERCC2	97	82.116	ENSPNYG00000022007	ercc2	99	82.116	Pundamilia_nyererei
ENSCCAG00000019831	ERCC2	97	81.642	ENSPNAG00000010434	ercc2	100	81.642	Pygocentrus_nattereri
ENSCCAG00000019831	ERCC2	99	97.080	ENSRROG00000040423	ERCC2	99	97.080	Rhinopithecus_roxellana
ENSCCAG00000019831	ERCC2	82	35.821	ENSSBOG00000035665	BRIP1	56	35.821	Saimiri_boliviensis_boliviensis
ENSCCAG00000019831	ERCC2	99	96.934	ENSSBOG00000030257	ERCC2	99	96.934	Saimiri_boliviensis_boliviensis
ENSCCAG00000019831	ERCC2	97	76.190	ENSSMAG00000019720	ercc2	99	76.190	Scophthalmus_maximus
ENSCCAG00000019831	ERCC2	97	81.614	ENSSDUG00000002397	ercc2	99	81.614	Seriola_dumerili
ENSCCAG00000019831	ERCC2	97	81.465	ENSSLDG00000020353	ercc2	99	81.465	Seriola_lalandi_dorsalis
ENSCCAG00000019831	ERCC2	99	82.456	ENSSPAG00000002074	ercc2	99	82.456	Stegastes_partitus
ENSCCAG00000019831	ERCC2	99	82.018	ENSTRUG00000007303	ercc2	99	82.018	Takifugu_rubripes
ENSCCAG00000019831	ERCC2	99	95.766	ENSUAMG00000019562	ERCC2	99	95.766	Ursus_americanus
ENSCCAG00000019831	ERCC2	99	78.216	ENSXMAG00000003922	ercc2	99	78.216	Xiphophorus_maculatus