EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000019912 (Gene tree)
Gene ID: 108315403
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 197929 bases
Position: chrKV389596.1:3194508-3392436
Accession: 108315403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000004941	Ago_hook	PF10427.9	8.9e-21	1	1
ENSCCAP00000004969	Ago_hook	PF10427.9	8.7e-20	1	1
ENSCCAP00000004990	Ago_hook	PF10427.9	1.3e-19	1	1
ENSCCAP00000004954	Ago_hook	PF10427.9	1.5e-19	1	1
ENSCCAP00000004976	Ago_hook	PF10427.9	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000022214	TNRC6B-202	5427	XM_017544743	ENSCCAP00000004954	1808 (aa)	XP_017400232	A0A2K5PMT4
ENSCCAT00000022230	TNRC6B-203	5307	-	ENSCCAP00000004969	1768 (aa)	-	A0A2K5PMU6
ENSCCAT00000022255	TNRC6B-205	5307	XM_017544737	ENSCCAP00000004990	1662 (aa)	XP_017400226	A0A2K5PMX8
ENSCCAT00000022238	TNRC6B-204	5148	-	ENSCCAP00000004976	1715 (aa)	-	A0A2K5PMY9
ENSCCAT00000022198	TNRC6B-201	3015	-	ENSCCAP00000004941	1004 (aa)	-	A0A2K5PMV8

Gene Model

Click here to download ENSCCAG00000019912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000019912	TNRC6B	94	46.250	ENSCCAG00000033664	TNRC6A	98	37.500
ENSCCAG00000019912	TNRC6B	88	53.012	ENSCCAG00000030524	TNRC6C	95	39.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019912	TNRC6B	100	98.091	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSCCAG00000019912	TNRC6B	99	96.124	ENSAMEG00000011025	TNRC6B	99	96.124	Ailuropoda_melanoleuca
ENSCCAG00000019912	TNRC6B	98	87.411	ENSAPLG00000009347	TNRC6B	99	87.116	Anas_platyrhynchos
ENSCCAG00000019912	TNRC6B	95	85.417	ENSACAG00000007281	TNRC6B	98	72.114	Anolis_carolinensis
ENSCCAG00000019912	TNRC6B	100	98.418	ENSANAG00000035042	TNRC6B	100	98.418	Aotus_nancymaae
ENSCCAG00000019912	TNRC6B	89	63.953	ENSAMXG00000008707	tnrc6b	82	46.063	Astyanax_mexicanus
ENSCCAG00000019912	TNRC6B	99	94.935	ENSBTAG00000021076	TNRC6B	100	94.935	Bos_taurus
ENSCCAG00000019912	TNRC6B	100	97.928	ENSCJAG00000002732	TNRC6B	100	98.763	Callithrix_jacchus
ENSCCAG00000019912	TNRC6B	99	95.919	ENSCAFG00000001255	TNRC6B	99	95.919	Canis_familiaris
ENSCCAG00000019912	TNRC6B	99	95.017	ENSCAFG00020002189	TNRC6B	99	95.181	Canis_lupus_dingo
ENSCCAG00000019912	TNRC6B	98	98.193	ENSCHIG00000003491	TNRC6B	99	94.692	Capra_hircus
ENSCCAG00000019912	TNRC6B	100	96.943	ENSTSYG00000011836	TNRC6B	100	96.943	Carlito_syrichta
ENSCCAG00000019912	TNRC6B	97	96.605	ENSCPOG00000005705	TNRC6B	98	95.195	Cavia_porcellus
ENSCCAG00000019912	TNRC6B	100	98.191	ENSCATG00000029291	TNRC6B	100	98.191	Cercocebus_atys
ENSCCAG00000019912	TNRC6B	99	95.529	ENSCLAG00000016942	TNRC6B	97	95.529	Chinchilla_lanigera
ENSCCAG00000019912	TNRC6B	98	93.739	ENSCSAG00000006021	TNRC6B	98	93.797	Chlorocebus_sabaeus
ENSCCAG00000019912	TNRC6B	60	90.476	ENSCHOG00000010004	-	62	97.987	Choloepus_hoffmanni
ENSCCAG00000019912	TNRC6B	94	87.571	ENSCPBG00000022932	TNRC6B	99	86.978	Chrysemys_picta_bellii
ENSCCAG00000019912	TNRC6B	100	97.545	ENSCANG00000030776	TNRC6B	100	97.545	Colobus_angolensis_palliatus
ENSCCAG00000019912	TNRC6B	97	95.365	ENSCGRG00001020166	Tnrc6b	95	93.974	Cricetulus_griseus_chok1gshd
ENSCCAG00000019912	TNRC6B	100	92.571	ENSCGRG00000016696	Tnrc6b	98	94.091	Cricetulus_griseus_crigri
ENSCCAG00000019912	TNRC6B	100	94.563	ENSDNOG00000012744	TNRC6B	99	94.929	Dasypus_novemcinctus
ENSCCAG00000019912	TNRC6B	100	94.530	ENSDORG00000003386	Tnrc6b	97	96.714	Dipodomys_ordii
ENSCCAG00000019912	TNRC6B	97	95.312	ENSETEG00000006570	TNRC6B	95	95.312	Echinops_telfairi
ENSCCAG00000019912	TNRC6B	99	95.630	ENSEASG00005005306	TNRC6B	98	96.105	Equus_asinus_asinus
ENSCCAG00000019912	TNRC6B	99	96.403	ENSECAG00000009759	TNRC6B	98	96.403	Equus_caballus
ENSCCAG00000019912	TNRC6B	74	95.500	ENSEEUG00000008690	-	62	95.500	Erinaceus_europaeus
ENSCCAG00000019912	TNRC6B	51	59.459	ENSELUG00000019468	-	71	59.934	Esox_lucius
ENSCCAG00000019912	TNRC6B	100	95.870	ENSFCAG00000004791	TNRC6B	100	95.870	Felis_catus
ENSCCAG00000019912	TNRC6B	95	87.574	ENSFALG00000012195	TNRC6B	100	87.279	Ficedula_albicollis
ENSCCAG00000019912	TNRC6B	97	97.155	ENSFDAG00000021368	TNRC6B	97	94.977	Fukomys_damarensis
ENSCCAG00000019912	TNRC6B	98	88.080	ENSGALG00000012050	TNRC6B	96	87.794	Gallus_gallus
ENSCCAG00000019912	TNRC6B	99	87.657	ENSGAGG00000025188	TNRC6B	98	87.439	Gopherus_agassizii
ENSCCAG00000019912	TNRC6B	100	98.036	ENSGGOG00000008444	TNRC6B	100	98.036	Gorilla_gorilla
ENSCCAG00000019912	TNRC6B	100	95.709	ENSHGLG00000009306	TNRC6B	100	95.709	Heterocephalus_glaber_female
ENSCCAG00000019912	TNRC6B	99	95.289	ENSHGLG00100018108	TNRC6B	98	95.289	Heterocephalus_glaber_male
ENSCCAG00000019912	TNRC6B	89	57.522	ENSIPUG00000001515	tnrc6b	93	47.928	Ictalurus_punctatus
ENSCCAG00000019912	TNRC6B	100	94.431	ENSSTOG00000008927	TNRC6B	97	95.023	Ictidomys_tridecemlineatus
ENSCCAG00000019912	TNRC6B	100	93.034	ENSJJAG00000015779	Tnrc6b	96	94.209	Jaculus_jaculus
ENSCCAG00000019912	TNRC6B	96	78.808	ENSLACG00000000628	-	98	61.418	Latimeria_chalumnae
ENSCCAG00000019912	TNRC6B	82	93.602	ENSLAFG00000014473	TNRC6B	100	95.255	Loxodonta_africana
ENSCCAG00000019912	TNRC6B	100	98.300	ENSMFAG00000003862	TNRC6B	100	98.300	Macaca_fascicularis
ENSCCAG00000019912	TNRC6B	100	97.182	ENSMMUG00000021345	TNRC6B	99	98.878	Macaca_mulatta
ENSCCAG00000019912	TNRC6B	99	96.606	ENSMNEG00000042745	TNRC6B	100	96.606	Macaca_nemestrina
ENSCCAG00000019912	TNRC6B	100	97.818	ENSMLEG00000041780	TNRC6B	100	97.818	Mandrillus_leucophaeus
ENSCCAG00000019912	TNRC6B	99	88.344	ENSMGAG00000012333	TNRC6B	99	87.849	Meleagris_gallopavo
ENSCCAG00000019912	TNRC6B	100	92.453	ENSMAUG00000016123	Tnrc6b	96	93.929	Mesocricetus_auratus
ENSCCAG00000019912	TNRC6B	100	96.678	ENSMICG00000014056	TNRC6B	100	96.678	Microcebus_murinus
ENSCCAG00000019912	TNRC6B	100	90.777	ENSMOCG00000020334	Tnrc6b	96	90.539	Microtus_ochrogaster
ENSCCAG00000019912	TNRC6B	64	80.645	ENSMMOG00000002799	si:dkey-217f16.6	59	69.388	Mola_mola
ENSCCAG00000019912	TNRC6B	100	92.335	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	94.101	Mus_caroli
ENSCCAG00000019912	TNRC6B	100	93.042	ENSMUSG00000047888	Tnrc6b	99	92.347	Mus_musculus
ENSCCAG00000019912	TNRC6B	100	91.981	MGP_PahariEiJ_G0020045	Tnrc6b	96	93.639	Mus_pahari
ENSCCAG00000019912	TNRC6B	100	93.160	MGP_SPRETEiJ_G0020941	Tnrc6b	97	94.143	Mus_spretus
ENSCCAG00000019912	TNRC6B	99	92.074	ENSMPUG00000016442	TNRC6B	100	92.074	Mustela_putorius_furo
ENSCCAG00000019912	TNRC6B	99	95.740	ENSMLUG00000008765	TNRC6B	99	95.740	Myotis_lucifugus
ENSCCAG00000019912	TNRC6B	100	92.714	ENSNGAG00000021294	Tnrc6b	96	94.441	Nannospalax_galili
ENSCCAG00000019912	TNRC6B	100	97.376	ENSNLEG00000015311	TNRC6B	100	97.376	Nomascus_leucogenys
ENSCCAG00000019912	TNRC6B	99	88.144	ENSOPRG00000012054	TNRC6B	86	93.532	Ochotona_princeps
ENSCCAG00000019912	TNRC6B	97	97.282	ENSODEG00000013146	TNRC6B	97	95.096	Octodon_degus
ENSCCAG00000019912	TNRC6B	89	68.889	ENSONIG00000019679	-	96	46.920	Oreochromis_niloticus
ENSCCAG00000019912	TNRC6B	100	96.277	ENSOCUG00000016128	TNRC6B	96	95.575	Oryctolagus_cuniculus
ENSCCAG00000019912	TNRC6B	100	96.570	ENSOGAG00000011096	TNRC6B	100	96.570	Otolemur_garnettii
ENSCCAG00000019912	TNRC6B	100	93.318	ENSOARG00000017238	TNRC6B	96	94.581	Ovis_aries
ENSCCAG00000019912	TNRC6B	100	98.091	ENSPPAG00000028514	TNRC6B	100	98.091	Pan_paniscus
ENSCCAG00000019912	TNRC6B	100	96.236	ENSPPRG00000017741	TNRC6B	100	96.236	Panthera_pardus
ENSCCAG00000019912	TNRC6B	99	91.550	ENSPTIG00000022064	TNRC6B	98	92.977	Panthera_tigris_altaica
ENSCCAG00000019912	TNRC6B	100	98.144	ENSPTRG00000047826	TNRC6B	100	98.144	Pan_troglodytes
ENSCCAG00000019912	TNRC6B	99	91.036	ENSPANG00000009271	TNRC6B	98	98.246	Papio_anubis
ENSCCAG00000019912	TNRC6B	98	87.650	ENSPSIG00000005318	TNRC6B	98	87.364	Pelodiscus_sinensis
ENSCCAG00000019912	TNRC6B	100	91.657	ENSPEMG00000011403	Tnrc6b	96	93.654	Peromyscus_maniculatus_bairdii
ENSCCAG00000019912	TNRC6B	99	86.329	ENSPCIG00000020347	TNRC6B	99	86.273	Phascolarctos_cinereus
ENSCCAG00000019912	TNRC6B	92	56.667	ENSPFOG00000006033	-	96	42.760	Poecilia_formosa
ENSCCAG00000019912	TNRC6B	86	69.863	ENSPLAG00000001418	-	98	38.700	Poecilia_latipinna
ENSCCAG00000019912	TNRC6B	99	96.793	ENSPPYG00000011849	TNRC6B	99	96.793	Pongo_abelii
ENSCCAG00000019912	TNRC6B	95	87.817	ENSPCAG00000008739	TNRC6B	74	92.798	Procavia_capensis
ENSCCAG00000019912	TNRC6B	100	96.895	ENSPCOG00000020790	TNRC6B	100	96.895	Propithecus_coquereli
ENSCCAG00000019912	TNRC6B	93	96.041	ENSPVAG00000004975	TNRC6B	92	96.041	Pteropus_vampyrus
ENSCCAG00000019912	TNRC6B	82	60.714	ENSPNAG00000011713	tnrc6b	79	41.449	Pygocentrus_nattereri
ENSCCAG00000019912	TNRC6B	100	91.748	ENSRNOG00000024907	Tnrc6b	96	93.444	Rattus_norvegicus
ENSCCAG00000019912	TNRC6B	100	97.600	ENSRBIG00000035576	TNRC6B	100	97.600	Rhinopithecus_bieti
ENSCCAG00000019912	TNRC6B	100	97.545	ENSRROG00000031135	TNRC6B	100	97.545	Rhinopithecus_roxellana
ENSCCAG00000019912	TNRC6B	99	97.145	ENSSBOG00000029743	TNRC6B	100	97.145	Saimiri_boliviensis_boliviensis
ENSCCAG00000019912	TNRC6B	99	86.612	ENSSHAG00000009692	TNRC6B	99	86.667	Sarcophilus_harrisii
ENSCCAG00000019912	TNRC6B	74	84.746	ENSSARG00000007971	-	70	88.636	Sorex_araneus
ENSCCAG00000019912	TNRC6B	92	87.166	ENSSPUG00000010801	TNRC6B	100	86.809	Sphenodon_punctatus
ENSCCAG00000019912	TNRC6B	99	95.961	ENSSSCG00000000078	TNRC6B	98	95.961	Sus_scrofa
ENSCCAG00000019912	TNRC6B	92	86.767	ENSTGUG00000010138	-	98	86.662	Taeniopygia_guttata
ENSCCAG00000019912	TNRC6B	99	94.681	ENSTTRG00000011465	TNRC6B	95	94.799	Tursiops_truncatus
ENSCCAG00000019912	TNRC6B	99	95.571	ENSUAMG00000007174	TNRC6B	99	95.571	Ursus_americanus
ENSCCAG00000019912	TNRC6B	99	94.969	ENSUMAG00000014336	TNRC6B	100	95.986	Ursus_maritimus
ENSCCAG00000019912	TNRC6B	82	93.617	ENSVPAG00000001467	TNRC6B	73	89.495	Vicugna_pacos
ENSCCAG00000019912	TNRC6B	99	95.969	ENSVVUG00000007064	TNRC6B	98	95.969	Vulpes_vulpes
ENSCCAG00000019912	TNRC6B	71	48.010	ENSXCOG00000003042	-	98	38.000	Xiphophorus_couchianus