EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000019955 (Gene tree)
Gene ID: 108293136
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 10493 bases
Position: chrKV389950.1:1289130-1299622
Accession: 108293136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000004724	R3H	PF01424.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000021948	R3HDM4-201	1777	XM_017514390	ENSCCAP00000004724	275 (aa)	XP_017369879	A0A2K5PM47

Gene Model

Click here to download ENSCCAG00000019955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019955	R3HDM4	88	96.296	ENSG00000198858	R3HDM4	91	96.296	Homo_sapiens
ENSCCAG00000019955	R3HDM4	88	90.947	ENSAMEG00000003001	R3HDM4	99	90.947	Ailuropoda_melanoleuca
ENSCCAG00000019955	R3HDM4	86	56.723	ENSACIG00000004672	r3hdm4	91	56.723	Amphilophus_citrinellus
ENSCCAG00000019955	R3HDM4	85	54.468	ENSATEG00000015913	r3hdm4	91	54.894	Anabas_testudineus
ENSCCAG00000019955	R3HDM4	88	98.354	ENSANAG00000029748	R3HDM4	100	98.354	Aotus_nancymaae
ENSCCAG00000019955	R3HDM4	94	89.922	ENSBTAG00000046406	R3HDM4	92	91.935	Bos_taurus
ENSCCAG00000019955	R3HDM4	89	97.951	ENSCJAG00000020114	R3HDM4	100	91.791	Callithrix_jacchus
ENSCCAG00000019955	R3HDM4	88	92.593	ENSCAFG00000019665	R3HDM4	89	92.593	Canis_familiaris
ENSCCAG00000019955	R3HDM4	88	92.181	ENSCAFG00020016880	R3HDM4	89	92.181	Canis_lupus_dingo
ENSCCAG00000019955	R3HDM4	91	92.000	ENSCHIG00000020110	R3HDM4	96	92.000	Capra_hircus
ENSCCAG00000019955	R3HDM4	88	93.878	ENSCATG00000037269	R3HDM4	91	94.286	Cercocebus_atys
ENSCCAG00000019955	R3HDM4	88	90.535	ENSCLAG00000007094	R3HDM4	99	90.535	Chinchilla_lanigera
ENSCCAG00000019955	R3HDM4	88	94.650	ENSCSAG00000012574	R3HDM4	91	94.650	Chlorocebus_sabaeus
ENSCCAG00000019955	R3HDM4	91	68.400	ENSCPBG00000009805	R3HDM4	95	68.400	Chrysemys_picta_bellii
ENSCCAG00000019955	R3HDM4	88	94.650	ENSCANG00000040439	R3HDM4	85	94.650	Colobus_angolensis_palliatus
ENSCCAG00000019955	R3HDM4	91	83.333	ENSCGRG00001021650	R3hdm4	95	85.317	Cricetulus_griseus_chok1gshd
ENSCCAG00000019955	R3HDM4	91	83.333	ENSCGRG00000013169	R3hdm4	95	85.317	Cricetulus_griseus_crigri
ENSCCAG00000019955	R3HDM4	86	54.812	ENSCSEG00000018211	r3hdm4	91	54.812	Cynoglossus_semilaevis
ENSCCAG00000019955	R3HDM4	86	56.067	ENSCVAG00000017127	r3hdm4	92	56.904	Cyprinodon_variegatus
ENSCCAG00000019955	R3HDM4	94	86.923	ENSDORG00000006605	R3hdm4	99	90.164	Dipodomys_ordii
ENSCCAG00000019955	R3HDM4	97	88.390	ENSEASG00005021556	R3HDM4	97	89.139	Equus_asinus_asinus
ENSCCAG00000019955	R3HDM4	88	92.593	ENSECAG00000000003	R3HDM4	96	88.123	Equus_caballus
ENSCCAG00000019955	R3HDM4	88	92.593	ENSFCAG00000042437	R3HDM4	90	92.593	Felis_catus
ENSCCAG00000019955	R3HDM4	88	67.901	ENSFALG00000013938	R3HDM4	100	67.901	Ficedula_albicollis
ENSCCAG00000019955	R3HDM4	88	88.934	ENSFDAG00000017040	R3HDM4	99	88.934	Fukomys_damarensis
ENSCCAG00000019955	R3HDM4	86	56.904	ENSFHEG00000017636	r3hdm4	92	56.904	Fundulus_heteroclitus
ENSCCAG00000019955	R3HDM4	86	51.261	ENSGMOG00000001231	r3hdm4	97	51.883	Gadus_morhua
ENSCCAG00000019955	R3HDM4	88	65.714	ENSGALG00000001998	R3HDM4	92	65.714	Gallus_gallus
ENSCCAG00000019955	R3HDM4	86	57.143	ENSGAFG00000004173	r3hdm4	92	57.143	Gambusia_affinis
ENSCCAG00000019955	R3HDM4	88	68.724	ENSGAGG00000019698	R3HDM4	92	68.724	Gopherus_agassizii
ENSCCAG00000019955	R3HDM4	88	96.296	ENSGGOG00000008040	R3HDM4	99	96.296	Gorilla_gorilla
ENSCCAG00000019955	R3HDM4	86	56.904	ENSHBUG00000014810	r3hdm4	91	57.741	Haplochromis_burtoni
ENSCCAG00000019955	R3HDM4	91	88.538	ENSHGLG00000016194	R3HDM4	94	88.538	Heterocephalus_glaber_female
ENSCCAG00000019955	R3HDM4	86	55.274	ENSHCOG00000008422	r3hdm4	91	55.274	Hippocampus_comes
ENSCCAG00000019955	R3HDM4	86	57.143	ENSIPUG00000006716	r3hdm4	91	57.143	Ictalurus_punctatus
ENSCCAG00000019955	R3HDM4	88	88.889	ENSSTOG00000023015	R3HDM4	99	88.889	Ictidomys_tridecemlineatus
ENSCCAG00000019955	R3HDM4	94	85.385	ENSJJAG00000012475	R3hdm4	98	85.385	Jaculus_jaculus
ENSCCAG00000019955	R3HDM4	89	56.911	ENSKMAG00000005853	r3hdm4	91	56.911	Kryptolebias_marmoratus
ENSCCAG00000019955	R3HDM4	86	55.042	ENSLBEG00000000730	r3hdm4	91	55.042	Labrus_bergylta
ENSCCAG00000019955	R3HDM4	88	60.905	ENSLACG00000016445	R3HDM4	93	60.905	Latimeria_chalumnae
ENSCCAG00000019955	R3HDM4	87	58.577	ENSLOCG00000002423	r3hdm4	91	58.577	Lepisosteus_oculatus
ENSCCAG00000019955	R3HDM4	89	90.650	ENSLAFG00000017796	R3HDM4	95	90.650	Loxodonta_africana
ENSCCAG00000019955	R3HDM4	88	95.062	ENSMFAG00000044131	R3HDM4	91	95.062	Macaca_fascicularis
ENSCCAG00000019955	R3HDM4	88	89.344	ENSMMUG00000009682	R3HDM4	98	89.344	Macaca_mulatta
ENSCCAG00000019955	R3HDM4	89	94.286	ENSMNEG00000044115	R3HDM4	99	94.286	Macaca_nemestrina
ENSCCAG00000019955	R3HDM4	91	92.460	ENSMLEG00000035693	R3HDM4	93	92.857	Mandrillus_leucophaeus
ENSCCAG00000019955	R3HDM4	74	59.223	ENSMAMG00000005652	r3hdm4	82	59.223	Mastacembelus_armatus
ENSCCAG00000019955	R3HDM4	91	85.317	ENSMAUG00000010611	R3hdm4	98	85.714	Mesocricetus_auratus
ENSCCAG00000019955	R3HDM4	88	92.181	ENSMICG00000010124	R3HDM4	90	92.181	Microcebus_murinus
ENSCCAG00000019955	R3HDM4	93	82.171	ENSMOCG00000002646	R3hdm4	98	82.558	Microtus_ochrogaster
ENSCCAG00000019955	R3HDM4	86	55.042	ENSMMOG00000008253	r3hdm4	92	55.042	Mola_mola
ENSCCAG00000019955	R3HDM4	84	66.379	ENSMODG00000005698	R3HDM4	100	66.379	Monodelphis_domestica
ENSCCAG00000019955	R3HDM4	86	55.462	ENSMALG00000018856	r3hdm4	91	55.462	Monopterus_albus
ENSCCAG00000019955	R3HDM4	91	83.665	MGP_CAROLIEiJ_G0015551	R3hdm4	95	84.462	Mus_caroli
ENSCCAG00000019955	R3HDM4	91	84.462	ENSMUSG00000035781	R3hdm4	95	85.259	Mus_musculus
ENSCCAG00000019955	R3HDM4	91	84.462	MGP_PahariEiJ_G0030964	R3hdm4	95	84.921	Mus_pahari
ENSCCAG00000019955	R3HDM4	88	86.008	MGP_SPRETEiJ_G0016369	-	80	85.259	Mus_spretus
ENSCCAG00000019955	R3HDM4	91	90.438	ENSMPUG00000009394	R3HDM4	93	90.438	Mustela_putorius_furo
ENSCCAG00000019955	R3HDM4	86	56.485	ENSNBRG00000004438	r3hdm4	91	57.322	Neolamprologus_brichardi
ENSCCAG00000019955	R3HDM4	82	94.372	ENSNLEG00000001022	R3HDM4	100	94.372	Nomascus_leucogenys
ENSCCAG00000019955	R3HDM4	86	66.667	ENSMEUG00000011020	R3HDM4	99	66.667	Notamacropus_eugenii
ENSCCAG00000019955	R3HDM4	91	88.048	ENSODEG00000011745	R3HDM4	94	88.048	Octodon_degus
ENSCCAG00000019955	R3HDM4	86	56.485	ENSONIG00000012675	r3hdm4	84	57.322	Oreochromis_niloticus
ENSCCAG00000019955	R3HDM4	86	56.904	ENSOMEG00000003005	r3hdm4	91	56.904	Oryzias_melastigma
ENSCCAG00000019955	R3HDM4	90	91.935	ENSOGAG00000025656	R3HDM4	94	91.935	Otolemur_garnettii
ENSCCAG00000019955	R3HDM4	88	93.416	ENSOARG00000009945	R3HDM4	99	93.416	Ovis_aries
ENSCCAG00000019955	R3HDM4	88	96.708	ENSPPAG00000042371	R3HDM4	99	96.708	Pan_paniscus
ENSCCAG00000019955	R3HDM4	88	95.062	ENSPANG00000015203	R3HDM4	91	95.062	Papio_anubis
ENSCCAG00000019955	R3HDM4	93	52.091	ENSPKIG00000007421	r3hdm4	99	52.091	Paramormyrops_kingsleyae
ENSCCAG00000019955	R3HDM4	89	52.033	ENSPMGG00000020467	r3hdm4	91	52.033	Periophthalmus_magnuspinnatus
ENSCCAG00000019955	R3HDM4	88	87.603	ENSPEMG00000008365	Tmem259	99	87.603	Peromyscus_maniculatus_bairdii
ENSCCAG00000019955	R3HDM4	86	56.303	ENSPFOG00000003199	r3hdm4	92	56.303	Poecilia_formosa
ENSCCAG00000019955	R3HDM4	86	55.882	ENSPMEG00000014183	r3hdm4	92	55.882	Poecilia_mexicana
ENSCCAG00000019955	R3HDM4	86	56.723	ENSPREG00000010709	r3hdm4	92	56.723	Poecilia_reticulata
ENSCCAG00000019955	R3HDM4	94	94.574	ENSPPYG00000009297	R3HDM4	96	94.574	Pongo_abelii
ENSCCAG00000019955	R3HDM4	55	90.789	ENSPCAG00000010997	R3HDM4	56	90.789	Procavia_capensis
ENSCCAG00000019955	R3HDM4	88	93.416	ENSPCOG00000016785	R3HDM4	90	93.416	Propithecus_coquereli
ENSCCAG00000019955	R3HDM4	86	56.904	ENSPNYG00000017489	r3hdm4	91	57.741	Pundamilia_nyererei
ENSCCAG00000019955	R3HDM4	91	84.064	ENSRNOG00000011489	R3hdm4	95	84.462	Rattus_norvegicus
ENSCCAG00000019955	R3HDM4	88	95.062	ENSRROG00000028842	R3HDM4	91	95.062	Rhinopithecus_roxellana
ENSCCAG00000019955	R3HDM4	97	92.989	ENSSBOG00000019298	R3HDM4	79	93.727	Saimiri_boliviensis_boliviensis
ENSCCAG00000019955	R3HDM4	53	71.233	ENSSHAG00000003036	-	100	71.233	Sarcophilus_harrisii
ENSCCAG00000019955	R3HDM4	89	55.870	ENSSFOG00015020574	r3hdm4	87	55.870	Scleropages_formosus
ENSCCAG00000019955	R3HDM4	86	57.741	ENSSMAG00000021090	r3hdm4	68	57.741	Scophthalmus_maximus
ENSCCAG00000019955	R3HDM4	86	58.159	ENSSDUG00000008488	r3hdm4	91	58.159	Seriola_dumerili
ENSCCAG00000019955	R3HDM4	86	58.159	ENSSLDG00000025328	r3hdm4	91	58.159	Seriola_lalandi_dorsalis
ENSCCAG00000019955	R3HDM4	87	70.417	ENSSPUG00000005434	R3HDM4	93	70.417	Sphenodon_punctatus
ENSCCAG00000019955	R3HDM4	85	54.661	ENSSPAG00000002562	r3hdm4	90	54.661	Stegastes_partitus
ENSCCAG00000019955	R3HDM4	92	90.909	ENSSSCG00000013419	R3HDM4	92	90.909	Sus_scrofa
ENSCCAG00000019955	R3HDM4	75	63.636	ENSTGUG00000000663	R3HDM4	100	63.636	Taeniopygia_guttata
ENSCCAG00000019955	R3HDM4	88	89.300	ENSTTRG00000001470	R3HDM4	99	89.712	Tursiops_truncatus
ENSCCAG00000019955	R3HDM4	81	91.928	ENSUAMG00000005751	R3HDM4	100	91.928	Ursus_americanus
ENSCCAG00000019955	R3HDM4	88	92.593	ENSVVUG00000022685	R3HDM4	89	92.593	Vulpes_vulpes
ENSCCAG00000019955	R3HDM4	87	46.281	ENSXETG00000033624	R3HDM4	92	46.281	Xenopus_tropicalis
ENSCCAG00000019955	R3HDM4	86	56.067	ENSXCOG00000005127	r3hdm4	92	56.067	Xiphophorus_couchianus
ENSCCAG00000019955	R3HDM4	86	56.303	ENSXMAG00000022875	r3hdm4	92	56.303	Xiphophorus_maculatus