EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000019971 (Gene tree)
Gene ID: 108284793
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrKV389440.1:6609731-6612466
Accession: 108284793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000004757	RNA_ligase	PF09414.10	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000021986	LIG4-201	2736	XM_017501680	ENSCCAP00000004757	911 (aa)	XP_017357169	A0A2K5PMB7

Gene Model

Click here to download ENSCCAG00000019971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000019971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000019971	LIG4	100	95.499	ENSG00000174405	LIG4	100	95.499	Homo_sapiens
ENSCCAG00000019971	LIG4	99	65.824	ENSAPOG00000000866	lig4	99	66.044	Acanthochromis_polyacanthus
ENSCCAG00000019971	LIG4	100	87.925	ENSAMEG00000019685	LIG4	99	87.925	Ailuropoda_melanoleuca
ENSCCAG00000019971	LIG4	99	66.117	ENSACIG00000018309	lig4	99	66.337	Amphilophus_citrinellus
ENSCCAG00000019971	LIG4	99	65.897	ENSAOCG00000011768	lig4	99	66.044	Amphiprion_ocellaris
ENSCCAG00000019971	LIG4	99	65.934	ENSAPEG00000017815	lig4	99	66.154	Amphiprion_percula
ENSCCAG00000019971	LIG4	99	65.604	ENSATEG00000005583	lig4	99	65.714	Anabas_testudineus
ENSCCAG00000019971	LIG4	97	74.773	ENSAPLG00000001673	LIG4	99	74.773	Anas_platyrhynchos
ENSCCAG00000019971	LIG4	99	76.080	ENSACAG00000014566	LIG4	99	76.080	Anolis_carolinensis
ENSCCAG00000019971	LIG4	100	97.475	ENSANAG00000012446	LIG4	100	97.475	Aotus_nancymaae
ENSCCAG00000019971	LIG4	99	65.787	ENSACLG00000027051	lig4	99	65.787	Astatotilapia_calliptera
ENSCCAG00000019971	LIG4	99	63.895	ENSAMXG00000008192	lig4	94	63.895	Astyanax_mexicanus
ENSCCAG00000019971	LIG4	100	87.925	ENSBTAG00000015868	LIG4	100	87.925	Bos_taurus
ENSCCAG00000019971	LIG4	100	96.707	ENSCJAG00000014689	LIG4	100	96.707	Callithrix_jacchus
ENSCCAG00000019971	LIG4	100	88.804	ENSCAFG00000006031	LIG4	100	88.804	Canis_familiaris
ENSCCAG00000019971	LIG4	100	88.804	ENSCAFG00020021230	LIG4	100	88.804	Canis_lupus_dingo
ENSCCAG00000019971	LIG4	100	87.925	ENSCHIG00000001019	LIG4	100	87.925	Capra_hircus
ENSCCAG00000019971	LIG4	99	87.929	ENSCAPG00000006284	LIG4	99	87.929	Cavia_aperea
ENSCCAG00000019971	LIG4	100	87.925	ENSCPOG00000014266	LIG4	100	87.925	Cavia_porcellus
ENSCCAG00000019971	LIG4	100	94.621	ENSCATG00000021075	LIG4	100	94.621	Cercocebus_atys
ENSCCAG00000019971	LIG4	100	88.584	ENSCLAG00000003376	LIG4	100	88.584	Chinchilla_lanigera
ENSCCAG00000019971	LIG4	100	95.060	ENSCSAG00000000211	LIG4	100	95.060	Chlorocebus_sabaeus
ENSCCAG00000019971	LIG4	99	79.691	ENSCPBG00000023291	LIG4	100	79.085	Chrysemys_picta_bellii
ENSCCAG00000019971	LIG4	68	45.628	ENSCING00000009536	-	95	45.628	Ciona_intestinalis
ENSCCAG00000019971	LIG4	83	45.335	ENSCSAVG00000010336	-	98	45.335	Ciona_savignyi
ENSCCAG00000019971	LIG4	100	94.731	ENSCANG00000005805	LIG4	100	94.731	Colobus_angolensis_palliatus
ENSCCAG00000019971	LIG4	100	85.746	ENSCGRG00001012072	Lig4	100	85.746	Cricetulus_griseus_chok1gshd
ENSCCAG00000019971	LIG4	100	85.746	ENSCGRG00000013417	Lig4	100	85.746	Cricetulus_griseus_crigri
ENSCCAG00000019971	LIG4	97	66.250	ENSCSEG00000013905	lig4	95	66.250	Cynoglossus_semilaevis
ENSCCAG00000019971	LIG4	99	66.445	ENSCVAG00000007896	lig4	99	66.445	Cyprinodon_variegatus
ENSCCAG00000019971	LIG4	99	63.898	ENSDARG00000060620	lig4	98	63.898	Danio_rerio
ENSCCAG00000019971	LIG4	100	89.254	ENSDNOG00000000513	LIG4	100	89.254	Dasypus_novemcinctus
ENSCCAG00000019971	LIG4	100	87.377	ENSDORG00000027303	Lig4	100	87.377	Dipodomys_ordii
ENSCCAG00000019971	LIG4	89	31.641	FBgn0030506	Lig4	90	31.641	Drosophila_melanogaster
ENSCCAG00000019971	LIG4	99	83.038	ENSETEG00000015563	LIG4	100	83.370	Echinops_telfairi
ENSCCAG00000019971	LIG4	99	43.365	ENSEBUG00000014243	lig4	99	43.365	Eptatretus_burgeri
ENSCCAG00000019971	LIG4	100	90.011	ENSEASG00005022073	LIG4	100	90.011	Equus_asinus_asinus
ENSCCAG00000019971	LIG4	100	89.682	ENSECAG00000003257	LIG4	100	89.682	Equus_caballus
ENSCCAG00000019971	LIG4	99	67.144	ENSELUG00000006787	lig4	99	67.255	Esox_lucius
ENSCCAG00000019971	LIG4	100	88.255	ENSFCAG00000031985	LIG4	100	88.255	Felis_catus
ENSCCAG00000019971	LIG4	89	75.400	ENSFALG00000004214	LIG4	98	75.400	Ficedula_albicollis
ENSCCAG00000019971	LIG4	100	89.133	ENSFDAG00000008973	LIG4	100	89.133	Fukomys_damarensis
ENSCCAG00000019971	LIG4	99	65.116	ENSFHEG00000007398	lig4	89	65.227	Fundulus_heteroclitus
ENSCCAG00000019971	LIG4	85	64.313	ENSGMOG00000012843	lig4	99	64.313	Gadus_morhua
ENSCCAG00000019971	LIG4	100	74.454	ENSGALG00000016854	LIG4	100	74.454	Gallus_gallus
ENSCCAG00000019971	LIG4	99	65.479	ENSGAFG00000019779	lig4	95	65.385	Gambusia_affinis
ENSCCAG00000019971	LIG4	99	63.566	ENSGACG00000014135	lig4	99	63.566	Gasterosteus_aculeatus
ENSCCAG00000019971	LIG4	100	95.390	ENSGGOG00000027771	LIG4	100	95.390	Gorilla_gorilla
ENSCCAG00000019971	LIG4	99	65.567	ENSHBUG00000006245	lig4	99	65.567	Haplochromis_burtoni
ENSCCAG00000019971	LIG4	100	88.584	ENSHGLG00000000718	LIG4	100	88.584	Heterocephalus_glaber_female
ENSCCAG00000019971	LIG4	100	88.584	ENSHGLG00100003265	LIG4	100	88.584	Heterocephalus_glaber_male
ENSCCAG00000019971	LIG4	99	64.725	ENSHCOG00000012010	lig4	99	64.725	Hippocampus_comes
ENSCCAG00000019971	LIG4	99	64.764	ENSIPUG00000013748	lig4	99	64.764	Ictalurus_punctatus
ENSCCAG00000019971	LIG4	100	89.352	ENSSTOG00000024303	LIG4	100	89.352	Ictidomys_tridecemlineatus
ENSCCAG00000019971	LIG4	100	85.840	ENSJJAG00000006750	Lig4	100	85.840	Jaculus_jaculus
ENSCCAG00000019971	LIG4	99	64.895	ENSKMAG00000001149	lig4	99	64.895	Kryptolebias_marmoratus
ENSCCAG00000019971	LIG4	91	66.226	ENSLBEG00000014578	lig4	100	66.466	Labrus_bergylta
ENSCCAG00000019971	LIG4	99	72.124	ENSLACG00000003282	LIG4	99	72.124	Latimeria_chalumnae
ENSCCAG00000019971	LIG4	99	69.780	ENSLOCG00000008901	lig4	98	69.780	Lepisosteus_oculatus
ENSCCAG00000019971	LIG4	100	86.309	ENSLAFG00000031152	LIG4	100	86.309	Loxodonta_africana
ENSCCAG00000019971	LIG4	100	94.841	ENSMFAG00000037235	LIG4	100	94.841	Macaca_fascicularis
ENSCCAG00000019971	LIG4	100	94.841	ENSMMUG00000008874	LIG4	100	94.841	Macaca_mulatta
ENSCCAG00000019971	LIG4	100	94.841	ENSMNEG00000023575	LIG4	100	94.841	Macaca_nemestrina
ENSCCAG00000019971	LIG4	100	94.951	ENSMLEG00000026720	LIG4	100	94.951	Mandrillus_leucophaeus
ENSCCAG00000019971	LIG4	99	65.934	ENSMAMG00000008472	lig4	99	66.154	Mastacembelus_armatus
ENSCCAG00000019971	LIG4	99	65.787	ENSMZEG00005001855	lig4	99	65.787	Maylandia_zebra
ENSCCAG00000019971	LIG4	99	75.412	ENSMGAG00000015532	LIG4	99	75.412	Meleagris_gallopavo
ENSCCAG00000019971	LIG4	100	83.315	ENSMOCG00000019000	Lig4	100	83.315	Microtus_ochrogaster
ENSCCAG00000019971	LIG4	99	65.227	ENSMMOG00000004390	lig4	99	65.227	Mola_mola
ENSCCAG00000019971	LIG4	100	82.766	ENSMODG00000025064	LIG4	100	82.766	Monodelphis_domestica
ENSCCAG00000019971	LIG4	99	65.781	ENSMALG00000008555	lig4	99	65.781	Monopterus_albus
ENSCCAG00000019971	LIG4	100	85.950	MGP_CAROLIEiJ_G0030809	Lig4	100	85.950	Mus_caroli
ENSCCAG00000019971	LIG4	100	85.950	ENSMUSG00000049717	Lig4	100	85.950	Mus_musculus
ENSCCAG00000019971	LIG4	100	85.950	MGP_PahariEiJ_G0021270	Lig4	100	85.950	Mus_pahari
ENSCCAG00000019971	LIG4	100	85.950	MGP_SPRETEiJ_G0031917	Lig4	100	85.950	Mus_spretus
ENSCCAG00000019971	LIG4	100	87.486	ENSMPUG00000018675	LIG4	100	87.486	Mustela_putorius_furo
ENSCCAG00000019971	LIG4	100	90.121	ENSMLUG00000001267	LIG4	100	90.121	Myotis_lucifugus
ENSCCAG00000019971	LIG4	100	86.059	ENSNGAG00000013258	Lig4	100	86.059	Nannospalax_galili
ENSCCAG00000019971	LIG4	99	66.007	ENSNBRG00000021252	lig4	99	66.007	Neolamprologus_brichardi
ENSCCAG00000019971	LIG4	100	94.841	ENSNLEG00000007888	LIG4	100	94.841	Nomascus_leucogenys
ENSCCAG00000019971	LIG4	100	86.169	ENSOPRG00000005765	LIG4	100	86.169	Ochotona_princeps
ENSCCAG00000019971	LIG4	100	86.937	ENSODEG00000019683	LIG4	100	86.937	Octodon_degus
ENSCCAG00000019971	LIG4	99	65.457	ENSONIG00000011969	lig4	98	65.677	Oreochromis_niloticus
ENSCCAG00000019971	LIG4	100	89.352	ENSOCUG00000015734	LIG4	100	89.352	Oryctolagus_cuniculus
ENSCCAG00000019971	LIG4	99	63.956	ENSORLG00000004041	lig4	99	64.066	Oryzias_latipes
ENSCCAG00000019971	LIG4	99	64.396	ENSORLG00020019607	lig4	99	64.505	Oryzias_latipes_hni
ENSCCAG00000019971	LIG4	99	63.846	ENSORLG00015017754	lig4	99	63.956	Oryzias_latipes_hsok
ENSCCAG00000019971	LIG4	74	69.822	ENSOMEG00000003459	lig4	98	69.822	Oryzias_melastigma
ENSCCAG00000019971	LIG4	100	90.461	ENSOGAG00000032120	LIG4	99	90.461	Otolemur_garnettii
ENSCCAG00000019971	LIG4	82	89.664	ENSOARG00000005590	LIG4	98	89.664	Ovis_aries
ENSCCAG00000019971	LIG4	100	95.060	ENSPPAG00000032998	LIG4	100	95.060	Pan_paniscus
ENSCCAG00000019971	LIG4	100	88.913	ENSPPRG00000017804	LIG4	100	88.913	Panthera_pardus
ENSCCAG00000019971	LIG4	100	88.804	ENSPTIG00000010051	LIG4	100	88.804	Panthera_tigris_altaica
ENSCCAG00000019971	LIG4	100	95.170	ENSPTRG00000006025	LIG4	100	95.170	Pan_troglodytes
ENSCCAG00000019971	LIG4	100	94.731	ENSPANG00000007562	LIG4	100	94.731	Papio_anubis
ENSCCAG00000019971	LIG4	99	66.520	ENSPKIG00000011645	lig4	98	66.520	Paramormyrops_kingsleyae
ENSCCAG00000019971	LIG4	99	79.011	ENSPSIG00000001504	LIG4	99	79.011	Pelodiscus_sinensis
ENSCCAG00000019971	LIG4	99	63.333	ENSPMGG00000013486	lig4	99	62.898	Periophthalmus_magnuspinnatus
ENSCCAG00000019971	LIG4	100	85.855	ENSPEMG00000000076	Lig4	100	85.855	Peromyscus_maniculatus_bairdii
ENSCCAG00000019971	LIG4	100	82.437	ENSPCIG00000021882	LIG4	100	82.437	Phascolarctos_cinereus
ENSCCAG00000019971	LIG4	99	65.517	ENSPFOG00000000797	lig4	99	65.385	Poecilia_formosa
ENSCCAG00000019971	LIG4	99	65.406	ENSPLAG00000001196	lig4	99	65.275	Poecilia_latipinna
ENSCCAG00000019971	LIG4	99	65.628	ENSPMEG00000021353	lig4	99	65.495	Poecilia_mexicana
ENSCCAG00000019971	LIG4	99	65.406	ENSPREG00000007323	lig4	99	65.165	Poecilia_reticulata
ENSCCAG00000019971	LIG4	100	95.280	ENSPPYG00000005540	LIG4	100	95.280	Pongo_abelii
ENSCCAG00000019971	LIG4	100	88.913	ENSPVAG00000016403	LIG4	100	88.913	Pteropus_vampyrus
ENSCCAG00000019971	LIG4	99	65.677	ENSPNYG00000009660	lig4	99	65.677	Pundamilia_nyererei
ENSCCAG00000019971	LIG4	100	64.294	ENSPNAG00000028069	LIG4	100	64.294	Pygocentrus_nattereri
ENSCCAG00000019971	LIG4	100	64.294	ENSPNAG00000028056	lig4	100	64.294	Pygocentrus_nattereri
ENSCCAG00000019971	LIG4	100	84.632	ENSRNOG00000014605	Lig4	100	84.632	Rattus_norvegicus
ENSCCAG00000019971	LIG4	100	93.414	ENSRBIG00000039962	LIG4	100	93.414	Rhinopithecus_bieti
ENSCCAG00000019971	LIG4	100	94.402	ENSRROG00000006040	LIG4	100	94.402	Rhinopithecus_roxellana
ENSCCAG00000019971	LIG4	100	96.707	ENSSBOG00000019029	LIG4	100	96.707	Saimiri_boliviensis_boliviensis
ENSCCAG00000019971	LIG4	100	80.022	ENSSHAG00000009525	LIG4	100	80.592	Sarcophilus_harrisii
ENSCCAG00000019971	LIG4	100	64.956	ENSSFOG00015012835	lig4	100	64.956	Scleropages_formosus
ENSCCAG00000019971	LIG4	99	63.344	ENSSMAG00000011267	lig4	99	63.344	Scophthalmus_maximus
ENSCCAG00000019971	LIG4	99	66.519	ENSSDUG00000010343	lig4	98	66.519	Seriola_dumerili
ENSCCAG00000019971	LIG4	99	64.615	ENSSLDG00000003239	lig4	99	64.615	Seriola_lalandi_dorsalis
ENSCCAG00000019971	LIG4	100	81.838	ENSSARG00000006573	LIG4	100	81.838	Sorex_araneus
ENSCCAG00000019971	LIG4	93	76.896	ENSSPUG00000002444	LIG4	100	76.896	Sphenodon_punctatus
ENSCCAG00000019971	LIG4	99	65.604	ENSSPAG00000001609	lig4	99	65.604	Stegastes_partitus
ENSCCAG00000019971	LIG4	100	87.047	ENSSSCG00000009540	LIG4	100	87.047	Sus_scrofa
ENSCCAG00000019971	LIG4	99	74.336	ENSTGUG00000010795	LIG4	99	74.336	Taeniopygia_guttata
ENSCCAG00000019971	LIG4	99	65.385	ENSTRUG00000009984	lig4	99	65.385	Takifugu_rubripes
ENSCCAG00000019971	LIG4	99	65.824	ENSTNIG00000010348	lig4	99	66.044	Tetraodon_nigroviridis
ENSCCAG00000019971	LIG4	100	89.682	ENSTBEG00000017741	LIG4	100	89.682	Tupaia_belangeri
ENSCCAG00000019971	LIG4	100	88.584	ENSTTRG00000012660	LIG4	100	88.584	Tursiops_truncatus
ENSCCAG00000019971	LIG4	100	88.035	ENSUAMG00000003773	LIG4	100	88.035	Ursus_americanus
ENSCCAG00000019971	LIG4	99	72.026	ENSXETG00000002654	lig4	99	72.026	Xenopus_tropicalis
ENSCCAG00000019971	LIG4	99	65.406	ENSXCOG00000017401	lig4	99	64.945	Xiphophorus_couchianus
ENSCCAG00000019971	LIG4	99	65.556	ENSXMAG00000015142	lig4	99	65.093	Xiphophorus_maculatus