EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000020193 (Gene tree)
Gene ID: 108304259
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Minus strand
Length: 41422 bases
Position: chrKV389479.1:3941518-3982939
Accession: 108304259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005640	RRM_5	PF13893.6	3.8e-07	1	1
ENSCCAP00000005635	RRM_5	PF13893.6	4e-07	1	1
ENSCCAP00000005621	RRM_5	PF13893.6	4.1e-07	1	1
ENSCCAP00000005640	RRM_1	PF00076.22	4.7e-13	1	1
ENSCCAP00000005635	RRM_1	PF00076.22	4.8e-13	1	1
ENSCCAP00000005621	RRM_1	PF00076.22	4.9e-13	1	1
ENSCCAP00000005640	SAP	PF02037.27	1.3e-09	1	1
ENSCCAP00000005635	SAP	PF02037.27	1.4e-09	1	1
ENSCCAP00000005621	SAP	PF02037.27	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000022962	SAFB-201	3075	XM_017528378	ENSCCAP00000005621	917 (aa)	XP_017383867	A0A2K5PPT0
ENSCCAT00000022982	SAFB-203	2547	-	ENSCCAP00000005640	848 (aa)	-	A0A2K5PPT5
ENSCCAT00000022977	SAFB-202	2718	-	ENSCCAP00000005635	905 (aa)	-	A0A2K5PPS9

Gene Model

Click here to download ENSCCAG00000020193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000020193	SAFB	100	69.602	ENSCCAG00000017348	SAFB2	94	70.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000020193	SAFB	100	98.703	ENSG00000160633	SAFB	100	98.703	Homo_sapiens
ENSCCAG00000020193	SAFB	90	45.675	ENSAPOG00000022508	safb	65	44.197	Acanthochromis_polyacanthus
ENSCCAG00000020193	SAFB	100	92.182	ENSAMEG00000012254	SAFB	98	92.085	Ailuropoda_melanoleuca
ENSCCAG00000020193	SAFB	94	40.795	ENSACIG00000006247	safb	95	44.444	Amphilophus_citrinellus
ENSCCAG00000020193	SAFB	92	44.457	ENSAOCG00000006308	safb	71	43.922	Amphiprion_ocellaris
ENSCCAG00000020193	SAFB	90	45.276	ENSAPEG00000023342	safb	66	43.718	Amphiprion_percula
ENSCCAG00000020193	SAFB	95	42.779	ENSATEG00000004998	safb	66	43.831	Anabas_testudineus
ENSCCAG00000020193	SAFB	93	64.902	ENSAPLG00000005780	-	100	64.747	Anas_platyrhynchos
ENSCCAG00000020193	SAFB	89	63.051	ENSAPLG00000006355	-	99	64.958	Anas_platyrhynchos
ENSCCAG00000020193	SAFB	100	99.292	ENSANAG00000028821	SAFB	100	99.292	Aotus_nancymaae
ENSCCAG00000020193	SAFB	95	42.954	ENSACLG00000001926	safb	64	44.799	Astatotilapia_calliptera
ENSCCAG00000020193	SAFB	91	44.585	ENSAMXG00000018154	safb	94	44.781	Astyanax_mexicanus
ENSCCAG00000020193	SAFB	100	89.107	ENSBTAG00000007875	SAFB	100	89.107	Bos_taurus
ENSCCAG00000020193	SAFB	89	98.537	ENSCJAG00000017081	SAFB	100	100.000	Callithrix_jacchus
ENSCCAG00000020193	SAFB	100	93.362	ENSCAFG00000018803	SAFB	87	93.362	Canis_familiaris
ENSCCAG00000020193	SAFB	100	93.362	ENSCAFG00020018943	SAFB	100	93.362	Canis_lupus_dingo
ENSCCAG00000020193	SAFB	100	88.126	ENSCHIG00000007262	SAFB	98	92.453	Capra_hircus
ENSCCAG00000020193	SAFB	63	80.748	ENSTSYG00000001851	-	100	77.248	Carlito_syrichta
ENSCCAG00000020193	SAFB	81	79.803	ENSCAPG00000012121	SAFB	77	82.412	Cavia_aperea
ENSCCAG00000020193	SAFB	100	86.426	ENSCPOG00000026322	SAFB	100	86.638	Cavia_porcellus
ENSCCAG00000020193	SAFB	100	98.939	ENSCATG00000029994	SAFB	100	98.939	Cercocebus_atys
ENSCCAG00000020193	SAFB	100	88.593	ENSCLAG00000007734	SAFB	100	89.339	Chinchilla_lanigera
ENSCCAG00000020193	SAFB	100	98.691	ENSCSAG00000009949	SAFB	100	98.691	Chlorocebus_sabaeus
ENSCCAG00000020193	SAFB	86	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSCCAG00000020193	SAFB	91	61.695	ENSCPBG00000010936	-	99	61.921	Chrysemys_picta_bellii
ENSCCAG00000020193	SAFB	91	64.539	ENSCPBG00000010928	-	99	64.497	Chrysemys_picta_bellii
ENSCCAG00000020193	SAFB	100	92.486	ENSCANG00000019754	-	100	92.376	Colobus_angolensis_palliatus
ENSCCAG00000020193	SAFB	100	85.387	ENSCANG00000004774	-	100	98.392	Colobus_angolensis_palliatus
ENSCCAG00000020193	SAFB	100	83.404	ENSCGRG00001002254	Safb	100	83.511	Cricetulus_griseus_chok1gshd
ENSCCAG00000020193	SAFB	88	82.682	ENSCGRG00000011529	Safb	96	80.778	Cricetulus_griseus_crigri
ENSCCAG00000020193	SAFB	93	43.106	ENSCSEG00000019870	safb	69	42.162	Cynoglossus_semilaevis
ENSCCAG00000020193	SAFB	94	40.389	ENSCVAG00000002226	safb	94	40.339	Cyprinodon_variegatus
ENSCCAG00000020193	SAFB	89	43.306	ENSDARG00000020467	safb	99	45.233	Danio_rerio
ENSCCAG00000020193	SAFB	100	92.274	ENSDNOG00000015746	SAFB	95	92.542	Dasypus_novemcinctus
ENSCCAG00000020193	SAFB	100	82.927	ENSDORG00000016200	Safb	100	83.263	Dipodomys_ordii
ENSCCAG00000020193	SAFB	80	85.000	ENSETEG00000018679	SAFB	85	85.000	Echinops_telfairi
ENSCCAG00000020193	SAFB	100	88.624	ENSEASG00005023019	SAFB	100	89.491	Equus_asinus_asinus
ENSCCAG00000020193	SAFB	100	90.632	ENSECAG00000018659	SAFB	89	90.959	Equus_caballus
ENSCCAG00000020193	SAFB	94	43.124	ENSELUG00000022327	safb	67	53.081	Esox_lucius
ENSCCAG00000020193	SAFB	100	93.471	ENSFCAG00000011835	SAFB	100	93.471	Felis_catus
ENSCCAG00000020193	SAFB	100	64.876	ENSFALG00000013882	-	89	64.784	Ficedula_albicollis
ENSCCAG00000020193	SAFB	90	62.500	ENSFALG00000013881	-	99	62.007	Ficedula_albicollis
ENSCCAG00000020193	SAFB	100	82.609	ENSFDAG00000020306	SAFB	100	88.281	Fukomys_damarensis
ENSCCAG00000020193	SAFB	94	37.727	ENSFHEG00000004219	safb	94	42.212	Fundulus_heteroclitus
ENSCCAG00000020193	SAFB	64	45.870	ENSGMOG00000014280	safb	95	41.905	Gadus_morhua
ENSCCAG00000020193	SAFB	100	64.194	ENSGALG00000013365	-	97	64.556	Gallus_gallus
ENSCCAG00000020193	SAFB	100	61.660	ENSGALG00000001948	-	97	63.259	Gallus_gallus
ENSCCAG00000020193	SAFB	94	38.386	ENSGAFG00000016162	safb	67	39.580	Gambusia_affinis
ENSCCAG00000020193	SAFB	95	42.560	ENSGACG00000011385	safb	67	41.935	Gasterosteus_aculeatus
ENSCCAG00000020193	SAFB	78	59.259	ENSGAGG00000017702	-	100	58.027	Gopherus_agassizii
ENSCCAG00000020193	SAFB	95	62.823	ENSGAGG00000008424	-	90	70.536	Gopherus_agassizii
ENSCCAG00000020193	SAFB	100	98.467	ENSGGOG00000015109	SAFB	100	98.467	Gorilla_gorilla
ENSCCAG00000020193	SAFB	95	39.976	ENSHBUG00000009218	safb	70	42.583	Haplochromis_burtoni
ENSCCAG00000020193	SAFB	100	90.267	ENSHGLG00000015883	SAFB	100	90.374	Heterocephalus_glaber_female
ENSCCAG00000020193	SAFB	100	84.058	ENSHGLG00100004228	SAFB	77	89.110	Heterocephalus_glaber_male
ENSCCAG00000020193	SAFB	91	38.030	ENSHCOG00000001705	safb	96	40.732	Hippocampus_comes
ENSCCAG00000020193	SAFB	97	46.103	ENSIPUG00000024869	safb2	98	46.205	Ictalurus_punctatus
ENSCCAG00000020193	SAFB	93	90.356	ENSSTOG00000002783	SAFB	100	90.815	Ictidomys_tridecemlineatus
ENSCCAG00000020193	SAFB	100	84.607	ENSJJAG00000009021	Safb	100	85.563	Jaculus_jaculus
ENSCCAG00000020193	SAFB	90	43.750	ENSKMAG00000022308	safb	95	43.376	Kryptolebias_marmoratus
ENSCCAG00000020193	SAFB	95	41.793	ENSLBEG00000006015	safb	65	44.984	Labrus_bergylta
ENSCCAG00000020193	SAFB	64	52.606	ENSLACG00000018090	SAFB	100	54.565	Latimeria_chalumnae
ENSCCAG00000020193	SAFB	97	47.154	ENSLOCG00000003613	safb	90	59.292	Lepisosteus_oculatus
ENSCCAG00000020193	SAFB	99	90.424	ENSLAFG00000003840	SAFB	100	89.227	Loxodonta_africana
ENSCCAG00000020193	SAFB	100	98.939	ENSMFAG00000003885	SAFB	100	98.939	Macaca_fascicularis
ENSCCAG00000020193	SAFB	100	98.939	ENSMMUG00000017970	SAFB	100	98.939	Macaca_mulatta
ENSCCAG00000020193	SAFB	100	96.685	ENSMNEG00000035637	SAFB	100	96.685	Macaca_nemestrina
ENSCCAG00000020193	SAFB	100	94.163	ENSMLEG00000038637	SAFB	100	94.163	Mandrillus_leucophaeus
ENSCCAG00000020193	SAFB	95	41.694	ENSMAMG00000003357	safb	60	42.444	Mastacembelus_armatus
ENSCCAG00000020193	SAFB	95	43.067	ENSMZEG00005009120	safb	66	44.571	Maylandia_zebra
ENSCCAG00000020193	SAFB	96	64.113	ENSMGAG00000001101	-	100	62.542	Meleagris_gallopavo
ENSCCAG00000020193	SAFB	89	58.838	ENSMGAG00000001051	-	97	61.702	Meleagris_gallopavo
ENSCCAG00000020193	SAFB	57	90.369	ENSMAUG00000005013	Safb	100	90.369	Mesocricetus_auratus
ENSCCAG00000020193	SAFB	85	80.952	ENSMICG00000046795	-	98	93.617	Microcebus_murinus
ENSCCAG00000020193	SAFB	100	93.051	ENSMICG00000008739	-	100	92.226	Microcebus_murinus
ENSCCAG00000020193	SAFB	100	83.511	ENSMOCG00000014040	Safb	100	83.936	Microtus_ochrogaster
ENSCCAG00000020193	SAFB	100	75.584	ENSMODG00000001236	SAFB	98	76.144	Monodelphis_domestica
ENSCCAG00000020193	SAFB	93	42.111	ENSMALG00000020330	safb	70	43.087	Monopterus_albus
ENSCCAG00000020193	SAFB	100	83.741	MGP_CAROLIEiJ_G0021780	Safb	100	84.166	Mus_caroli
ENSCCAG00000020193	SAFB	100	83.634	ENSMUSG00000071054	Safb	100	84.060	Mus_musculus
ENSCCAG00000020193	SAFB	100	83.333	MGP_PahariEiJ_G0020769	Safb	100	84.076	Mus_pahari
ENSCCAG00000020193	SAFB	100	92.709	ENSMPUG00000006123	SAFB	94	92.709	Mustela_putorius_furo
ENSCCAG00000020193	SAFB	100	91.077	ENSMLUG00000001081	SAFB	100	91.186	Myotis_lucifugus
ENSCCAG00000020193	SAFB	100	81.462	ENSNGAG00000019882	Safb	100	81.780	Nannospalax_galili
ENSCCAG00000020193	SAFB	96	98.747	ENSNLEG00000013551	SAFB	100	98.764	Nomascus_leucogenys
ENSCCAG00000020193	SAFB	88	85.258	ENSOPRG00000011561	-	100	85.504	Ochotona_princeps
ENSCCAG00000020193	SAFB	100	90.192	ENSODEG00000014838	SAFB	100	90.299	Octodon_degus
ENSCCAG00000020193	SAFB	95	43.128	ENSONIG00000002318	safb	66	45.199	Oreochromis_niloticus
ENSCCAG00000020193	SAFB	90	81.873	ENSOCUG00000014628	SAFB	64	86.415	Oryctolagus_cuniculus
ENSCCAG00000020193	SAFB	90	42.558	ENSORLG00000016989	safb	64	41.554	Oryzias_latipes
ENSCCAG00000020193	SAFB	94	43.293	ENSORLG00020000404	safb	70	42.133	Oryzias_latipes_hni
ENSCCAG00000020193	SAFB	94	43.082	ENSORLG00015010733	safb	64	42.664	Oryzias_latipes_hsok
ENSCCAG00000020193	SAFB	95	39.451	ENSOMEG00000009066	safb	65	40.397	Oryzias_melastigma
ENSCCAG00000020193	SAFB	100	90.889	ENSOGAG00000027769	SAFB	100	90.239	Otolemur_garnettii
ENSCCAG00000020193	SAFB	100	85.419	ENSOARG00000007662	-	100	84.875	Ovis_aries
ENSCCAG00000020193	SAFB	78	83.077	ENSOARG00000007856	-	100	82.797	Ovis_aries
ENSCCAG00000020193	SAFB	100	98.585	ENSPPAG00000035129	SAFB	100	98.585	Pan_paniscus
ENSCCAG00000020193	SAFB	100	93.471	ENSPPRG00000017197	SAFB	100	93.471	Panthera_pardus
ENSCCAG00000020193	SAFB	100	98.585	ENSPTRG00000010335	SAFB	100	98.585	Pan_troglodytes
ENSCCAG00000020193	SAFB	100	98.912	ENSPANG00000007770	SAFB	100	98.821	Papio_anubis
ENSCCAG00000020193	SAFB	95	43.301	ENSPKIG00000009902	safb	67	45.755	Paramormyrops_kingsleyae
ENSCCAG00000020193	SAFB	99	61.684	ENSPSIG00000009367	-	97	61.430	Pelodiscus_sinensis
ENSCCAG00000020193	SAFB	100	61.895	ENSPSIG00000011679	-	100	63.585	Pelodiscus_sinensis
ENSCCAG00000020193	SAFB	100	84.115	ENSPEMG00000020428	Safb	100	84.542	Peromyscus_maniculatus_bairdii
ENSCCAG00000020193	SAFB	63	80.847	ENSPCIG00000009504	-	99	82.400	Phascolarctos_cinereus
ENSCCAG00000020193	SAFB	94	39.572	ENSPFOG00000007745	safb	94	41.637	Poecilia_formosa
ENSCCAG00000020193	SAFB	94	38.833	ENSPLAG00000001614	safb	95	40.618	Poecilia_latipinna
ENSCCAG00000020193	SAFB	94	39.346	ENSPMEG00000021023	safb	98	41.466	Poecilia_mexicana
ENSCCAG00000020193	SAFB	93	39.541	ENSPREG00000012496	safb	95	41.149	Poecilia_reticulata
ENSCCAG00000020193	SAFB	100	98.582	ENSPPYG00000009428	SAFB	100	98.582	Pongo_abelii
ENSCCAG00000020193	SAFB	100	86.566	ENSPCAG00000006475	SAFB	100	86.566	Procavia_capensis
ENSCCAG00000020193	SAFB	100	88.967	ENSPCOG00000014090	SAFB	100	88.615	Propithecus_coquereli
ENSCCAG00000020193	SAFB	100	86.296	ENSPVAG00000004913	SAFB	100	84.331	Pteropus_vampyrus
ENSCCAG00000020193	SAFB	93	45.829	ENSPNAG00000021838	safb	97	46.600	Pygocentrus_nattereri
ENSCCAG00000020193	SAFB	100	83.987	ENSRNOG00000050543	Safb	100	84.624	Rattus_norvegicus
ENSCCAG00000020193	SAFB	100	84.879	ENSRBIG00000042509	SAFB	88	97.849	Rhinopithecus_bieti
ENSCCAG00000020193	SAFB	100	99.057	ENSRROG00000029278	SAFB	100	99.057	Rhinopithecus_roxellana
ENSCCAG00000020193	SAFB	100	100.000	ENSSBOG00000026291	SAFB	100	100.000	Saimiri_boliviensis_boliviensis
ENSCCAG00000020193	SAFB	95	45.016	ENSSFOG00015008156	safb	95	46.804	Scleropages_formosus
ENSCCAG00000020193	SAFB	95	41.758	ENSSMAG00000009316	safb	66	44.337	Scophthalmus_maximus
ENSCCAG00000020193	SAFB	95	43.889	ENSSDUG00000009652	safb	72	42.675	Seriola_dumerili
ENSCCAG00000020193	SAFB	95	43.948	ENSSLDG00000001670	safb	65	43.274	Seriola_lalandi_dorsalis
ENSCCAG00000020193	SAFB	93	85.164	ENSSARG00000010475	SAFB	100	85.164	Sorex_araneus
ENSCCAG00000020193	SAFB	87	59.125	ENSSPUG00000009747	-	99	58.904	Sphenodon_punctatus
ENSCCAG00000020193	SAFB	93	42.428	ENSSPAG00000015682	safb	69	41.195	Stegastes_partitus
ENSCCAG00000020193	SAFB	100	92.473	ENSSSCG00000013522	SAFB	99	93.838	Sus_scrofa
ENSCCAG00000020193	SAFB	93	61.547	ENSTGUG00000000489	-	97	64.671	Taeniopygia_guttata
ENSCCAG00000020193	SAFB	96	63.870	ENSTGUG00000000502	-	97	64.977	Taeniopygia_guttata
ENSCCAG00000020193	SAFB	91	41.724	ENSTRUG00000003567	safb	98	43.632	Takifugu_rubripes
ENSCCAG00000020193	SAFB	87	57.647	ENSTNIG00000015470	safb	97	57.647	Tetraodon_nigroviridis
ENSCCAG00000020193	SAFB	74	91.729	ENSTBEG00000013124	-	66	91.729	Tupaia_belangeri
ENSCCAG00000020193	SAFB	94	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSCCAG00000020193	SAFB	85	90.424	ENSUAMG00000024543	SAFB	100	90.424	Ursus_americanus
ENSCCAG00000020193	SAFB	88	92.821	ENSUMAG00000009734	SAFB	97	92.775	Ursus_maritimus
ENSCCAG00000020193	SAFB	73	93.846	ENSVPAG00000012043	SAFB	79	93.846	Vicugna_pacos
ENSCCAG00000020193	SAFB	100	93.362	ENSVVUG00000013720	SAFB	87	93.362	Vulpes_vulpes
ENSCCAG00000020193	SAFB	63	63.551	ENSXETG00000008755	safb	89	70.930	Xenopus_tropicalis
ENSCCAG00000020193	SAFB	95	39.405	ENSXMAG00000003458	safb	94	41.855	Xiphophorus_maculatus