EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCCAG00000020258 (Gene tree)
Gene ID: 108286991
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: msx2-interacting protein
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 105908 bases
Position: chrKV389441.1:6549135-6655042
Accession: 108286991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005143	RRM_1	PF00076.22	4.5e-24	1	1
ENSCCAP00000005147	RRM_1	PF00076.22	1.6e-22	1	2
ENSCCAP00000005147	RRM_1	PF00076.22	1.6e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000022438	SPEN-201	10710	-	ENSCCAP00000005143	3569 (aa)	-	A0A2K5PNC8
ENSCCAT00000022444	SPEN-202	9763	XM_017505167	ENSCCAP00000005147	2962 (aa)	XP_017360656	A0A2K5PND6

Gene Model

Click here to download ENSCCAG00000020258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000020258	SPEN	99	95.191	ENSG00000065526	SPEN	100	91.154	Homo_sapiens
ENSCCAG00000020258	SPEN	77	83.626	ENSAPOG00000011411	si:ch1073-335m2.2	65	83.626	Acanthochromis_polyacanthus
ENSCCAG00000020258	SPEN	86	81.461	ENSAPOG00000009853	-	91	74.532	Acanthochromis_polyacanthus
ENSCCAG00000020258	SPEN	99	85.022	ENSAMEG00000011817	SPEN	100	82.751	Ailuropoda_melanoleuca
ENSCCAG00000020258	SPEN	66	77.778	ENSAOCG00000008077	si:ch1073-335m2.2	72	77.778	Amphiprion_ocellaris
ENSCCAG00000020258	SPEN	90	81.461	ENSAOCG00000014505	-	89	43.853	Amphiprion_ocellaris
ENSCCAG00000020258	SPEN	76	83.626	ENSAPEG00000013515	si:ch1073-335m2.2	75	83.626	Amphiprion_percula
ENSCCAG00000020258	SPEN	86	81.461	ENSAPEG00000010288	-	89	43.514	Amphiprion_percula
ENSCCAG00000020258	SPEN	77	84.615	ENSATEG00000007674	si:ch1073-335m2.2	75	84.615	Anabas_testudineus
ENSCCAG00000020258	SPEN	85	82.584	ENSATEG00000005627	-	89	43.985	Anabas_testudineus
ENSCCAG00000020258	SPEN	96	67.825	ENSAPLG00000012618	SPEN	100	65.088	Anas_platyrhynchos
ENSCCAG00000020258	SPEN	95	60.180	ENSACAG00000013761	SPEN	100	57.922	Anolis_carolinensis
ENSCCAG00000020258	SPEN	99	97.897	ENSANAG00000034428	SPEN	99	93.148	Aotus_nancymaae
ENSCCAG00000020258	SPEN	73	84.211	ENSACLG00000021433	si:ch1073-335m2.2	77	84.211	Astatotilapia_calliptera
ENSCCAG00000020258	SPEN	86	81.461	ENSACLG00000016922	-	99	41.001	Astatotilapia_calliptera
ENSCCAG00000020258	SPEN	86	83.240	ENSAMXG00000012485	spen	98	82.065	Astyanax_mexicanus
ENSCCAG00000020258	SPEN	99	84.841	ENSBTAG00000018729	SPEN	100	82.045	Bos_taurus
ENSCCAG00000020258	SPEN	99	97.154	ENSCJAG00000008527	SPEN	100	93.583	Callithrix_jacchus
ENSCCAG00000020258	SPEN	95	83.633	ENSCAFG00000016132	-	96	82.559	Canis_familiaris
ENSCCAG00000020258	SPEN	99	84.909	ENSCHIG00000025070	SPEN	100	82.126	Capra_hircus
ENSCCAG00000020258	SPEN	99	88.339	ENSTSYG00000036016	SPEN	99	84.631	Carlito_syrichta
ENSCCAG00000020258	SPEN	99	77.928	ENSCAPG00000013803	SPEN	100	76.635	Cavia_aperea
ENSCCAG00000020258	SPEN	99	78.233	ENSCPOG00000014036	SPEN	100	76.908	Cavia_porcellus
ENSCCAG00000020258	SPEN	95	100.000	ENSCATG00000015079	SPEN	99	99.265	Cercocebus_atys
ENSCCAG00000020258	SPEN	99	79.284	ENSCLAG00000002018	SPEN	99	89.863	Chinchilla_lanigera
ENSCCAG00000020258	SPEN	99	94.514	ENSCSAG00000000841	SPEN	100	90.334	Chlorocebus_sabaeus
ENSCCAG00000020258	SPEN	96	67.435	ENSCPBG00000010477	SPEN	100	65.841	Chrysemys_picta_bellii
ENSCCAG00000020258	SPEN	99	92.889	ENSCANG00000034547	SPEN	99	90.257	Colobus_angolensis_palliatus
ENSCCAG00000020258	SPEN	99	78.814	ENSCGRG00001007725	Spen	100	76.602	Cricetulus_griseus_chok1gshd
ENSCCAG00000020258	SPEN	99	78.352	ENSCGRG00000010581	Spen	100	75.548	Cricetulus_griseus_crigri
ENSCCAG00000020258	SPEN	67	84.270	ENSCSEG00000003915	-	91	42.436	Cynoglossus_semilaevis
ENSCCAG00000020258	SPEN	86	42.449	ENSCVAG00000016346	-	90	43.020	Cyprinodon_variegatus
ENSCCAG00000020258	SPEN	77	84.795	ENSCVAG00000009075	si:ch1073-335m2.2	85	84.795	Cyprinodon_variegatus
ENSCCAG00000020258	SPEN	95	63.836	ENSDARG00000074245	spen	100	88.889	Danio_rerio
ENSCCAG00000020258	SPEN	73	66.520	ENSDARG00000074332	si:ch1073-335m2.2	85	63.454	Danio_rerio
ENSCCAG00000020258	SPEN	99	84.538	ENSDNOG00000041948	SPEN	100	81.806	Dasypus_novemcinctus
ENSCCAG00000020258	SPEN	99	74.571	ENSDORG00000023909	Spen	99	75.929	Dipodomys_ordii
ENSCCAG00000020258	SPEN	67	97.479	ENSETEG00000016692	-	67	97.490	Echinops_telfairi
ENSCCAG00000020258	SPEN	95	100.000	ENSEASG00005015911	SPEN	99	100.000	Equus_asinus_asinus
ENSCCAG00000020258	SPEN	97	99.251	ENSECAG00000008833	SPEN	99	100.000	Equus_caballus
ENSCCAG00000020258	SPEN	70	95.349	ENSEEUG00000010255	SPEN	76	95.349	Erinaceus_europaeus
ENSCCAG00000020258	SPEN	58	81.111	ENSELUG00000007726	si:ch1073-335m2.2	67	81.111	Esox_lucius
ENSCCAG00000020258	SPEN	86	63.743	ENSFALG00000003551	SPEN	100	63.978	Ficedula_albicollis
ENSCCAG00000020258	SPEN	99	80.121	ENSFDAG00000010212	SPEN	100	77.696	Fukomys_damarensis
ENSCCAG00000020258	SPEN	77	73.430	ENSFHEG00000004544	si:ch1073-335m2.2	77	73.913	Fundulus_heteroclitus
ENSCCAG00000020258	SPEN	61	80.447	ENSGMOG00000008156	si:ch1073-335m2.2	54	80.447	Gadus_morhua
ENSCCAG00000020258	SPEN	76	79.888	ENSGMOG00000008397	-	95	66.265	Gadus_morhua
ENSCCAG00000020258	SPEN	96	66.739	ENSGALG00000036932	SPEN	99	65.240	Gallus_gallus
ENSCCAG00000020258	SPEN	96	41.152	ENSGAFG00000015819	-	91	73.783	Gambusia_affinis
ENSCCAG00000020258	SPEN	68	84.024	ENSGAFG00000021570	si:ch1073-335m2.2	66	84.024	Gambusia_affinis
ENSCCAG00000020258	SPEN	78	81.176	ENSGACG00000001176	si:ch1073-335m2.2	72	81.176	Gasterosteus_aculeatus
ENSCCAG00000020258	SPEN	97	41.754	ENSGACG00000005341	-	99	41.592	Gasterosteus_aculeatus
ENSCCAG00000020258	SPEN	96	96.296	ENSGAGG00000020785	SPEN	100	67.321	Gopherus_agassizii
ENSCCAG00000020258	SPEN	99	94.853	ENSGGOG00000012041	SPEN	100	90.827	Gorilla_gorilla
ENSCCAG00000020258	SPEN	59	84.211	ENSHBUG00000023253	si:ch1073-335m2.2	75	84.211	Haplochromis_burtoni
ENSCCAG00000020258	SPEN	86	81.461	ENSHBUG00000020626	-	99	41.151	Haplochromis_burtoni
ENSCCAG00000020258	SPEN	100	76.180	ENSHGLG00000019259	SPEN	100	76.456	Heterocephalus_glaber_female
ENSCCAG00000020258	SPEN	86	82.495	ENSHGLG00100019294	SPEN	95	78.472	Heterocephalus_glaber_male
ENSCCAG00000020258	SPEN	70	81.250	ENSHCOG00000006004	si:ch1073-335m2.2	81	81.250	Hippocampus_comes
ENSCCAG00000020258	SPEN	86	82.778	ENSIPUG00000021668	spen	98	81.967	Ictalurus_punctatus
ENSCCAG00000020258	SPEN	73	77.273	ENSIPUG00000018212	si:ch1073-335m2.2	76	77.273	Ictalurus_punctatus
ENSCCAG00000020258	SPEN	99	84.795	ENSSTOG00000021428	SPEN	100	81.663	Ictidomys_tridecemlineatus
ENSCCAG00000020258	SPEN	99	80.665	ENSJJAG00000010882	Spen	100	78.431	Jaculus_jaculus
ENSCCAG00000020258	SPEN	85	80.899	ENSKMAG00000003882	-	91	42.070	Kryptolebias_marmoratus
ENSCCAG00000020258	SPEN	77	83.041	ENSKMAG00000021725	si:ch1073-335m2.2	75	83.041	Kryptolebias_marmoratus
ENSCCAG00000020258	SPEN	85	39.979	ENSLBEG00000019129	-	93	69.828	Labrus_bergylta
ENSCCAG00000020258	SPEN	72	72.500	ENSLBEG00000020855	si:ch1073-335m2.2	72	72.500	Labrus_bergylta
ENSCCAG00000020258	SPEN	97	57.489	ENSLACG00000003258	SPEN	90	81.863	Latimeria_chalumnae
ENSCCAG00000020258	SPEN	96	50.777	ENSLOCG00000007896	si:ch1073-335m2.2	99	50.418	Lepisosteus_oculatus
ENSCCAG00000020258	SPEN	99	85.024	ENSLAFG00000004524	SPEN	100	81.939	Loxodonta_africana
ENSCCAG00000020258	SPEN	99	94.740	ENSMFAG00000041974	SPEN	100	90.524	Macaca_fascicularis
ENSCCAG00000020258	SPEN	99	94.774	ENSMMUG00000008026	SPEN	100	90.667	Macaca_mulatta
ENSCCAG00000020258	SPEN	99	94.842	ENSMNEG00000042402	SPEN	100	90.605	Macaca_nemestrina
ENSCCAG00000020258	SPEN	99	94.920	ENSMLEG00000039293	SPEN	99	90.225	Mandrillus_leucophaeus
ENSCCAG00000020258	SPEN	58	83.832	ENSMAMG00000023870	si:ch1073-335m2.2	63	83.832	Mastacembelus_armatus
ENSCCAG00000020258	SPEN	83	43.880	ENSMZEG00005021491	-	99	40.938	Maylandia_zebra
ENSCCAG00000020258	SPEN	73	84.211	ENSMZEG00005011762	si:ch1073-335m2.2	75	84.211	Maylandia_zebra
ENSCCAG00000020258	SPEN	99	75.891	ENSMAUG00000008318	Spen	99	75.704	Mesocricetus_auratus
ENSCCAG00000020258	SPEN	99	87.872	ENSMICG00000030994	SPEN	100	85.012	Microcebus_murinus
ENSCCAG00000020258	SPEN	99	78.644	ENSMOCG00000016083	Spen	100	77.125	Microtus_ochrogaster
ENSCCAG00000020258	SPEN	97	66.558	ENSMODG00000003411	SPEN	100	65.558	Monodelphis_domestica
ENSCCAG00000020258	SPEN	82	82.022	ENSMALG00000008625	-	89	43.629	Monopterus_albus
ENSCCAG00000020258	SPEN	99	77.165	MGP_CAROLIEiJ_G0026745	Spen	100	75.515	Mus_caroli
ENSCCAG00000020258	SPEN	99	76.791	ENSMUSG00000040761	Spen	100	75.338	Mus_musculus
ENSCCAG00000020258	SPEN	99	76.538	MGP_PahariEiJ_G0029076	Spen	100	75.149	Mus_pahari
ENSCCAG00000020258	SPEN	99	76.889	MGP_SPRETEiJ_G0027724	Spen	100	75.487	Mus_spretus
ENSCCAG00000020258	SPEN	99	84.313	ENSMPUG00000016317	SPEN	100	81.748	Mustela_putorius_furo
ENSCCAG00000020258	SPEN	98	84.634	ENSMLUG00000010144	SPEN	98	80.609	Myotis_lucifugus
ENSCCAG00000020258	SPEN	97	81.423	ENSNGAG00000000641	Spen	95	84.653	Nannospalax_galili
ENSCCAG00000020258	SPEN	69	84.211	ENSNBRG00000005733	si:ch1073-335m2.2	73	84.211	Neolamprologus_brichardi
ENSCCAG00000020258	SPEN	85	41.239	ENSNBRG00000022090	-	99	41.001	Neolamprologus_brichardi
ENSCCAG00000020258	SPEN	99	94.785	ENSNLEG00000007652	SPEN	99	90.514	Nomascus_leucogenys
ENSCCAG00000020258	SPEN	84	93.750	ENSMEUG00000002422	SPEN	87	93.750	Notamacropus_eugenii
ENSCCAG00000020258	SPEN	91	86.255	ENSOPRG00000015800	SPEN	93	83.358	Ochotona_princeps
ENSCCAG00000020258	SPEN	100	76.259	ENSODEG00000016644	SPEN	100	76.450	Octodon_degus
ENSCCAG00000020258	SPEN	85	44.046	ENSONIG00000006573	-	95	67.339	Oreochromis_niloticus
ENSCCAG00000020258	SPEN	99	80.948	ENSOCUG00000010840	SPEN	99	77.691	Oryctolagus_cuniculus
ENSCCAG00000020258	SPEN	76	77.157	ENSORLG00000028894	-	92	77.157	Oryzias_latipes
ENSCCAG00000020258	SPEN	68	81.871	ENSORLG00000018414	si:ch1073-335m2.2	67	65.254	Oryzias_latipes
ENSCCAG00000020258	SPEN	66	81.871	ENSORLG00020009351	si:ch1073-335m2.2	86	65.254	Oryzias_latipes_hni
ENSCCAG00000020258	SPEN	71	77.157	ENSORLG00020007735	-	85	77.157	Oryzias_latipes_hni
ENSCCAG00000020258	SPEN	86	77.157	ENSORLG00015022085	-	93	77.157	Oryzias_latipes_hsok
ENSCCAG00000020258	SPEN	66	81.287	ENSORLG00015005537	si:ch1073-335m2.2	77	64.286	Oryzias_latipes_hsok
ENSCCAG00000020258	SPEN	70	67.117	ENSOMEG00000004509	si:ch1073-335m2.2	78	65.254	Oryzias_melastigma
ENSCCAG00000020258	SPEN	93	76.617	ENSOMEG00000007639	-	99	76.617	Oryzias_melastigma
ENSCCAG00000020258	SPEN	99	87.365	ENSOGAG00000025110	SPEN	100	84.436	Otolemur_garnettii
ENSCCAG00000020258	SPEN	99	84.600	ENSOARG00000008477	SPEN	99	81.201	Ovis_aries
ENSCCAG00000020258	SPEN	99	95.090	ENSPPAG00000035690	SPEN	100	91.059	Pan_paniscus
ENSCCAG00000020258	SPEN	99	95.022	ENSPTRG00000000210	SPEN	100	91.072	Pan_troglodytes
ENSCCAG00000020258	SPEN	99	93.191	ENSPANG00000006293	SPEN	100	90.897	Papio_anubis
ENSCCAG00000020258	SPEN	93	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	98	100.000	Paramormyrops_kingsleyae
ENSCCAG00000020258	SPEN	86	46.349	ENSPKIG00000002617	SPEN	91	80.741	Paramormyrops_kingsleyae
ENSCCAG00000020258	SPEN	96	65.418	ENSPSIG00000008026	SPEN	100	65.199	Pelodiscus_sinensis
ENSCCAG00000020258	SPEN	99	79.129	ENSPEMG00000022997	Spen	100	76.919	Peromyscus_maniculatus_bairdii
ENSCCAG00000020258	SPEN	75	85.207	ENSPFOG00000017986	si:ch1073-335m2.2	66	85.207	Poecilia_formosa
ENSCCAG00000020258	SPEN	59	85.207	ENSPLAG00000016625	si:ch1073-335m2.2	66	85.207	Poecilia_latipinna
ENSCCAG00000020258	SPEN	86	41.955	ENSPMEG00000006764	-	91	73.783	Poecilia_mexicana
ENSCCAG00000020258	SPEN	57	85.207	ENSPMEG00000002674	si:ch1073-335m2.2	68	85.207	Poecilia_mexicana
ENSCCAG00000020258	SPEN	96	40.942	ENSPREG00000010399	-	91	74.157	Poecilia_reticulata
ENSCCAG00000020258	SPEN	75	85.207	ENSPREG00000005357	si:ch1073-335m2.2	66	85.207	Poecilia_reticulata
ENSCCAG00000020258	SPEN	99	95.361	ENSPPYG00000001834	SPEN	100	91.345	Pongo_abelii
ENSCCAG00000020258	SPEN	87	92.527	ENSPCAG00000009543	SPEN	92	87.963	Procavia_capensis
ENSCCAG00000020258	SPEN	99	87.606	ENSPCOG00000021735	SPEN	100	85.999	Propithecus_coquereli
ENSCCAG00000020258	SPEN	78	93.005	ENSPVAG00000013794	SPEN	84	80.389	Pteropus_vampyrus
ENSCCAG00000020258	SPEN	73	84.211	ENSPNYG00000009042	si:ch1073-335m2.2	75	84.211	Pundamilia_nyererei
ENSCCAG00000020258	SPEN	86	81.461	ENSPNYG00000012379	-	99	41.151	Pundamilia_nyererei
ENSCCAG00000020258	SPEN	69	62.903	ENSPNAG00000011452	si:ch1073-335m2.2	86	62.903	Pygocentrus_nattereri
ENSCCAG00000020258	SPEN	86	84.181	ENSPNAG00000020795	spen	86	78.571	Pygocentrus_nattereri
ENSCCAG00000020258	SPEN	99	77.364	ENSRNOG00000033556	Spen	100	75.041	Rattus_norvegicus
ENSCCAG00000020258	SPEN	99	93.972	ENSRBIG00000039654	SPEN	100	90.019	Rhinopithecus_bieti
ENSCCAG00000020258	SPEN	99	94.277	ENSRROG00000035686	SPEN	100	90.152	Rhinopithecus_roxellana
ENSCCAG00000020258	SPEN	97	97.840	ENSSBOG00000028770	SPEN	99	97.840	Saimiri_boliviensis_boliviensis
ENSCCAG00000020258	SPEN	97	67.349	ENSSHAG00000004960	SPEN	93	78.182	Sarcophilus_harrisii
ENSCCAG00000020258	SPEN	95	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	89	65.741	Scleropages_formosus
ENSCCAG00000020258	SPEN	81	84.211	ENSSFOG00015010267	si:ch1073-335m2.2	84	84.211	Scleropages_formosus
ENSCCAG00000020258	SPEN	90	82.022	ENSSMAG00000008996	-	90	42.615	Scophthalmus_maximus
ENSCCAG00000020258	SPEN	59	73.558	ENSSMAG00000000125	si:ch1073-335m2.2	64	73.558	Scophthalmus_maximus
ENSCCAG00000020258	SPEN	78	75.124	ENSSDUG00000008416	si:ch1073-335m2.2	76	75.124	Seriola_dumerili
ENSCCAG00000020258	SPEN	91	82.584	ENSSDUG00000003476	-	91	75.465	Seriola_dumerili
ENSCCAG00000020258	SPEN	87	82.584	ENSSLDG00000012950	-	91	75.465	Seriola_lalandi_dorsalis
ENSCCAG00000020258	SPEN	77	74.627	ENSSLDG00000023347	si:ch1073-335m2.2	56	74.627	Seriola_lalandi_dorsalis
ENSCCAG00000020258	SPEN	96	66.261	ENSSPUG00000001866	-	100	65.269	Sphenodon_punctatus
ENSCCAG00000020258	SPEN	68	84.211	ENSSPAG00000012454	si:ch1073-335m2.2	65	84.211	Stegastes_partitus
ENSCCAG00000020258	SPEN	86	81.461	ENSSPAG00000006014	-	91	74.906	Stegastes_partitus
ENSCCAG00000020258	SPEN	92	85.720	ENSSSCG00000034484	SPEN	99	81.668	Sus_scrofa
ENSCCAG00000020258	SPEN	86	41.878	ENSTRUG00000024350	-	90	42.816	Takifugu_rubripes
ENSCCAG00000020258	SPEN	56	46.733	ENSTRUG00000021008	si:ch1073-335m2.2	59	80.226	Takifugu_rubripes
ENSCCAG00000020258	SPEN	77	82.456	ENSTNIG00000014666	si:ch1073-335m2.2	65	82.456	Tetraodon_nigroviridis
ENSCCAG00000020258	SPEN	50	59.113	ENSTNIG00000010907	-	90	60.173	Tetraodon_nigroviridis
ENSCCAG00000020258	SPEN	76	94.860	ENSTBEG00000003628	SPEN	77	94.860	Tupaia_belangeri
ENSCCAG00000020258	SPEN	78	94.884	ENSTTRG00000015704	SPEN	79	94.884	Tursiops_truncatus
ENSCCAG00000020258	SPEN	99	85.661	ENSUAMG00000009600	SPEN	100	82.771	Ursus_americanus
ENSCCAG00000020258	SPEN	99	84.652	ENSUMAG00000021641	SPEN	100	81.258	Ursus_maritimus
ENSCCAG00000020258	SPEN	95	100.000	ENSVVUG00000028951	SPEN	99	100.000	Vulpes_vulpes
ENSCCAG00000020258	SPEN	97	56.197	ENSXETG00000023114	SPEN	99	55.889	Xenopus_tropicalis
ENSCCAG00000020258	SPEN	68	84.024	ENSXCOG00000004516	si:ch1073-335m2.2	77	84.024	Xiphophorus_couchianus
ENSCCAG00000020258	SPEN	96	41.288	ENSXMAG00000021384	-	90	72.075	Xiphophorus_maculatus
ENSCCAG00000020258	SPEN	68	84.024	ENSXMAG00000029887	si:ch1073-335m2.2	77	84.024	Xiphophorus_maculatus