EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000020531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 5758 bases
Position: chrKV390392.1:106423-112180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005550	RRM_1	PF00076.22	1.6e-30	1	2
ENSCCAP00000005550	RRM_1	PF00076.22	1.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000022891	-	648	-	ENSCCAP00000005550	215 (aa)	-	A0A2K5PPJ4
ENSCCAT00000022887	-	156	-	ENSCCAP00000005546	51 (aa)	-	A0A2K5PPK3

Gene Model

Click here to download ENSCCAG00000020531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000020531	-	62	44.526	ENSCCAG00000021563	-	56	51.402
ENSCCAG00000020531	-	80	36.095	ENSCCAG00000033451	-	56	36.095
ENSCCAG00000020531	-	75	32.749	ENSCCAG00000020722	-	58	30.808
ENSCCAG00000020531	-	78	50.595	ENSCCAG00000033927	MSI2	70	50.595
ENSCCAG00000020531	-	75	36.257	ENSCCAG00000034725	-	56	34.715
ENSCCAG00000020531	-	58	34.848	ENSCCAG00000031612	-	55	33.117
ENSCCAG00000020531	-	75	31.902	ENSCCAG00000028483	-	55	31.902
ENSCCAG00000020531	-	66	32.836	ENSCCAG00000036872	RBM38	62	32.836
ENSCCAG00000020531	-	75	33.728	ENSCCAG00000031850	-	52	33.333
ENSCCAG00000020531	-	55	38.462	ENSCCAG00000028588	-	90	38.462
ENSCCAG00000020531	-	75	34.320	ENSCCAG00000006246	-	53	34.320
ENSCCAG00000020531	-	81	33.728	ENSCCAG00000019706	-	57	33.728
ENSCCAG00000020531	-	85	34.921	ENSCCAG00000029074	HNRNPA2B1	65	36.095
ENSCCAG00000020531	-	75	32.544	ENSCCAG00000010302	HNRNPA0	55	32.544
ENSCCAG00000020531	-	75	30.864	ENSCCAG00000023903	-	52	30.864
ENSCCAG00000020531	-	75	33.728	ENSCCAG00000022725	-	53	33.728
ENSCCAG00000020531	-	61	31.387	ENSCCAG00000034419	-	52	31.387
ENSCCAG00000020531	-	76	71.779	ENSCCAG00000024528	HNRNPD	59	71.084
ENSCCAG00000020531	-	75	37.278	ENSCCAG00000025864	-	55	34.694
ENSCCAG00000020531	-	70	37.333	ENSCCAG00000037368	-	80	37.333
ENSCCAG00000020531	-	75	36.310	ENSCCAG00000037906	-	64	33.951
ENSCCAG00000020531	-	71	32.911	ENSCCAG00000029939	-	60	31.053
ENSCCAG00000020531	-	75	35.503	ENSCCAG00000016565	-	54	33.163
ENSCCAG00000020531	-	75	34.911	ENSCCAG00000001588	-	53	34.911
ENSCCAG00000020531	-	78	69.231	ENSCCAG00000036244	HNRNPAB	61	68.675

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000020531	-	77	94.578	ENSG00000152795	HNRNPDL	55	94.578	Homo_sapiens
ENSCCAG00000020531	-	75	76.074	ENSAMEG00000007660	-	53	76.074	Ailuropoda_melanoleuca
ENSCCAG00000020531	-	77	93.711	ENSAPLG00000011774	HNRNPDL	60	93.711	Anas_platyrhynchos
ENSCCAG00000020531	-	77	93.373	ENSACAG00000010416	HNRNPDL	53	93.373	Anolis_carolinensis
ENSCCAG00000020531	-	79	90.643	ENSANAG00000035355	-	65	89.205	Aotus_nancymaae
ENSCCAG00000020531	-	77	79.577	ENSANAG00000035255	-	63	75.155	Aotus_nancymaae
ENSCCAG00000020531	-	77	83.735	ENSANAG00000038001	-	53	83.735	Aotus_nancymaae
ENSCCAG00000020531	-	78	82.840	ENSAMXG00000001495	hnrnpdl	58	81.034	Astyanax_mexicanus
ENSCCAG00000020531	-	77	93.373	ENSCJAG00000045227	-	59	93.373	Callithrix_jacchus
ENSCCAG00000020531	-	77	84.940	ENSCAFG00000000776	-	59	84.940	Canis_familiaris
ENSCCAG00000020531	-	79	74.269	ENSTSYG00000036907	-	79	73.295	Carlito_syrichta
ENSCCAG00000020531	-	77	95.181	ENSTSYG00000031074	-	61	95.181	Carlito_syrichta
ENSCCAG00000020531	-	76	71.779	ENSCAPG00000015955	-	58	71.779	Cavia_aperea
ENSCCAG00000020531	-	92	83.333	ENSCATG00000030349	-	89	83.333	Cercocebus_atys
ENSCCAG00000020531	-	77	75.152	ENSCLAG00000010786	-	54	75.152	Chinchilla_lanigera
ENSCCAG00000020531	-	77	91.566	ENSCHOG00000003275	-	50	91.566	Choloepus_hoffmanni
ENSCCAG00000020531	-	77	92.169	ENSCHOG00000002938	-	61	92.169	Choloepus_hoffmanni
ENSCCAG00000020531	-	77	89.873	ENSCHOG00000009204	-	60	89.873	Choloepus_hoffmanni
ENSCCAG00000020531	-	77	94.578	ENSCHOG00000000160	-	57	94.578	Choloepus_hoffmanni
ENSCCAG00000020531	-	77	92.169	ENSCHOG00000010831	-	58	92.169	Choloepus_hoffmanni
ENSCCAG00000020531	-	77	94.578	ENSCPBG00000008014	HNRNPDL	55	94.578	Chrysemys_picta_bellii
ENSCCAG00000020531	-	77	94.578	ENSCANG00000020228	-	61	94.578	Colobus_angolensis_palliatus
ENSCCAG00000020531	-	76	94.545	ENSCGRG00001010960	Hnrnpdl	53	94.578	Cricetulus_griseus_chok1gshd
ENSCCAG00000020531	-	76	94.545	ENSCGRG00000011361	-	59	94.578	Cricetulus_griseus_crigri
ENSCCAG00000020531	-	79	82.456	ENSDARG00000003429	hnrnpdl	56	83.133	Danio_rerio
ENSCCAG00000020531	-	77	88.554	ENSDNOG00000033760	-	53	88.554	Dasypus_novemcinctus
ENSCCAG00000020531	-	76	76.974	ENSDNOG00000046422	-	83	76.974	Dasypus_novemcinctus
ENSCCAG00000020531	-	77	91.566	ENSDNOG00000018280	-	54	91.566	Dasypus_novemcinctus
ENSCCAG00000020531	-	77	94.578	ENSDNOG00000033765	-	68	94.578	Dasypus_novemcinctus
ENSCCAG00000020531	-	90	67.692	ENSDNOG00000034016	-	63	78.049	Dasypus_novemcinctus
ENSCCAG00000020531	-	77	87.952	ENSDORG00000024157	-	55	87.952	Dipodomys_ordii
ENSCCAG00000020531	-	58	66.667	ENSETEG00000010820	-	54	66.929	Echinops_telfairi
ENSCCAG00000020531	-	85	59.563	ENSEASG00005012961	-	85	59.563	Equus_asinus_asinus
ENSCCAG00000020531	-	80	61.272	ENSECAG00000040564	-	66	63.804	Equus_caballus
ENSCCAG00000020531	-	77	94.578	ENSECAG00000022692	HNRNPDL	52	94.578	Equus_caballus
ENSCCAG00000020531	-	79	82.456	ENSELUG00000003241	hnrnpdl	55	82.530	Esox_lucius
ENSCCAG00000020531	-	77	93.976	ENSFALG00000005709	HNRNPDL	55	93.976	Ficedula_albicollis
ENSCCAG00000020531	-	77	94.578	ENSFDAG00000000851	-	61	94.578	Fukomys_damarensis
ENSCCAG00000020531	-	79	55.882	ENSFDAG00000002891	-	52	57.055	Fukomys_damarensis
ENSCCAG00000020531	-	77	93.976	ENSGALG00000023199	HNRNPDL	55	93.976	Gallus_gallus
ENSCCAG00000020531	-	77	94.578	ENSGAGG00000003646	HNRNPDL	55	94.578	Gopherus_agassizii
ENSCCAG00000020531	-	77	90.964	ENSHGLG00000014427	-	79	90.964	Heterocephalus_glaber_female
ENSCCAG00000020531	-	76	90.909	ENSHGLG00000013420	-	55	90.909	Heterocephalus_glaber_female
ENSCCAG00000020531	-	76	85.455	ENSHGLG00100010072	-	61	84.940	Heterocephalus_glaber_male
ENSCCAG00000020531	-	77	75.152	ENSHGLG00100016282	-	53	75.152	Heterocephalus_glaber_male
ENSCCAG00000020531	-	76	81.325	ENSHGLG00100017644	-	58	80.838	Heterocephalus_glaber_male
ENSCCAG00000020531	-	74	89.441	ENSHGLG00100019080	-	53	89.441	Heterocephalus_glaber_male
ENSCCAG00000020531	-	80	79.769	ENSIPUG00000024951	hnrnpdl	63	79.885	Ictalurus_punctatus
ENSCCAG00000020531	-	77	89.759	ENSJJAG00000000674	-	56	89.759	Jaculus_jaculus
ENSCCAG00000020531	-	77	81.301	ENSLACG00000003613	HNRNPDL	72	81.301	Latimeria_chalumnae
ENSCCAG00000020531	-	79	84.706	ENSLOCG00000010736	hnrnpdl	56	84.940	Lepisosteus_oculatus
ENSCCAG00000020531	-	82	55.367	ENSLAFG00000031444	-	67	57.055	Loxodonta_africana
ENSCCAG00000020531	-	77	94.578	ENSLAFG00000008612	HNRNPDL	56	94.578	Loxodonta_africana
ENSCCAG00000020531	-	80	95.726	ENSMMUG00000015777	HNRNPDL	75	94.578	Macaca_mulatta
ENSCCAG00000020531	-	77	89.157	ENSMLEG00000014825	-	54	89.157	Mandrillus_leucophaeus
ENSCCAG00000020531	-	77	94.578	ENSMLEG00000041600	HNRNPDL	55	94.578	Mandrillus_leucophaeus
ENSCCAG00000020531	-	77	93.976	ENSMGAG00000008033	HNRNPDL	61	93.976	Meleagris_gallopavo
ENSCCAG00000020531	-	76	94.545	ENSMAUG00000011132	Hnrnpdl	53	94.578	Mesocricetus_auratus
ENSCCAG00000020531	-	77	94.578	ENSMICG00000001445	-	54	94.578	Microcebus_murinus
ENSCCAG00000020531	-	77	92.169	ENSMICG00000037040	-	75	92.169	Microcebus_murinus
ENSCCAG00000020531	-	77	90.964	ENSMODG00000006825	-	68	90.964	Monodelphis_domestica
ENSCCAG00000020531	-	77	94.578	ENSMUSG00000029328	Hnrnpdl	51	94.578	Mus_musculus
ENSCCAG00000020531	-	77	94.578	MGP_PahariEiJ_G0017226	Hnrnpdl	52	94.578	Mus_pahari
ENSCCAG00000020531	-	77	94.578	MGP_SPRETEiJ_G0028445	Hnrnpdl	52	94.578	Mus_spretus
ENSCCAG00000020531	-	77	94.304	ENSMPUG00000014753	-	60	94.304	Mustela_putorius_furo
ENSCCAG00000020531	-	77	73.054	ENSMPUG00000006259	-	56	73.494	Mustela_putorius_furo
ENSCCAG00000020531	-	76	76.829	ENSMPUG00000011188	-	66	77.848	Mustela_putorius_furo
ENSCCAG00000020531	-	77	92.169	ENSMPUG00000009986	-	51	92.169	Mustela_putorius_furo
ENSCCAG00000020531	-	92	50.000	ENSMLUG00000030192	-	61	56.707	Myotis_lucifugus
ENSCCAG00000020531	-	76	76.970	ENSMLUG00000025989	-	57	76.970	Myotis_lucifugus
ENSCCAG00000020531	-	92	83.838	ENSNLEG00000008636	HNRNPDL	96	82.828	Nomascus_leucogenys
ENSCCAG00000020531	-	79	79.412	ENSMEUG00000010033	HNRNPDL	51	79.878	Notamacropus_eugenii
ENSCCAG00000020531	-	77	93.976	ENSMEUG00000011454	-	85	93.976	Notamacropus_eugenii
ENSCCAG00000020531	-	77	94.578	ENSOPRG00000007178	-	61	94.578	Ochotona_princeps
ENSCCAG00000020531	-	77	93.373	ENSODEG00000000376	-	60	93.373	Octodon_degus
ENSCCAG00000020531	-	77	94.578	ENSODEG00000003135	-	57	94.578	Octodon_degus
ENSCCAG00000020531	-	77	84.848	ENSODEG00000004187	-	53	84.848	Octodon_degus
ENSCCAG00000020531	-	77	94.578	ENSOANG00000004651	HNRNPDL	61	94.578	Ornithorhynchus_anatinus
ENSCCAG00000020531	-	77	59.036	ENSOCUG00000025252	-	85	59.036	Oryctolagus_cuniculus
ENSCCAG00000020531	-	77	63.855	ENSOGAG00000024995	-	62	63.855	Otolemur_garnettii
ENSCCAG00000020531	-	81	84.659	ENSOGAG00000031703	-	78	84.659	Otolemur_garnettii
ENSCCAG00000020531	-	77	93.373	ENSOARG00000011472	-	58	93.373	Ovis_aries
ENSCCAG00000020531	-	77	94.578	ENSOARG00000000824	-	51	94.578	Ovis_aries
ENSCCAG00000020531	-	77	93.617	ENSOARG00000002402	-	54	93.617	Ovis_aries
ENSCCAG00000020531	-	77	94.578	ENSPTIG00000018505	HNRNPDL	55	94.578	Panthera_tigris_altaica
ENSCCAG00000020531	-	80	82.558	ENSPKIG00000025514	hnrnpdl	56	83.133	Paramormyrops_kingsleyae
ENSCCAG00000020531	-	77	94.578	ENSPSIG00000016746	HNRNPDL	50	94.578	Pelodiscus_sinensis
ENSCCAG00000020531	-	76	94.545	ENSPEMG00000016545	-	56	94.578	Peromyscus_maniculatus_bairdii
ENSCCAG00000020531	-	81	76.136	ENSPCIG00000009814	-	62	78.182	Phascolarctos_cinereus
ENSCCAG00000020531	-	78	75.362	ENSPCIG00000008965	-	69	75.362	Phascolarctos_cinereus
ENSCCAG00000020531	-	77	94.578	ENSPCOG00000019831	-	56	94.578	Propithecus_coquereli
ENSCCAG00000020531	-	80	82.081	ENSPNAG00000016380	hnrnpdl	59	82.184	Pygocentrus_nattereri
ENSCCAG00000020531	-	77	94.578	ENSRNOG00000002270	Hnrnpdl	52	94.578	Rattus_norvegicus
ENSCCAG00000020531	-	65	67.376	ENSSBOG00000028904	-	57	67.606	Saimiri_boliviensis_boliviensis
ENSCCAG00000020531	-	75	86.420	ENSSBOG00000020566	-	53	86.420	Saimiri_boliviensis_boliviensis
ENSCCAG00000020531	-	80	68.605	ENSSBOG00000022627	-	51	84.252	Saimiri_boliviensis_boliviensis
ENSCCAG00000020531	-	77	93.976	ENSSHAG00000013616	-	55	93.976	Sarcophilus_harrisii
ENSCCAG00000020531	-	80	84.302	ENSSFOG00015005893	hnrnpdl	56	84.940	Scleropages_formosus
ENSCCAG00000020531	-	77	86.957	ENSSARG00000009961	-	56	86.957	Sorex_araneus
ENSCCAG00000020531	-	76	93.939	ENSSPUG00000013700	HNRNPDL	55	93.976	Sphenodon_punctatus
ENSCCAG00000020531	-	99	55.399	ENSSSCG00000012473	-	81	55.399	Sus_scrofa
ENSCCAG00000020531	-	77	93.976	ENSTGUG00000002850	HNRNPDL	61	93.976	Taeniopygia_guttata
ENSCCAG00000020531	-	77	94.578	ENSTBEG00000002817	-	51	94.578	Tupaia_belangeri
ENSCCAG00000020531	-	77	68.675	ENSVPAG00000002422	-	61	68.675	Vicugna_pacos
ENSCCAG00000020531	-	77	73.485	ENSVVUG00000001421	-	67	73.485	Vulpes_vulpes
ENSCCAG00000020531	-	77	90.361	ENSVVUG00000013596	-	56	90.361	Vulpes_vulpes
ENSCCAG00000020531	-	76	90.909	ENSXETG00000023026	hnrnpdl	56	90.964	Xenopus_tropicalis