EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCCAG00000020578 (Gene tree)
Gene ID: 108301653
Gene Symbol: -
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Cebus_capucinus
Status: putative
Strand: Plus strand
Length: 3805 bases
Position: chrKV389462.1:1440920-1444724
Accession: 108301653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCCAP00000005682	RRM_1	PF00076.22	1.8e-13	1	1
ENSCCAP00000005698	RRM_1	PF00076.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCCAT00000023024	-	1153	XM_017524834	ENSCCAP00000005682	264 (aa)	XP_017380323	A0A2K5PPX4
ENSCCAT00000023040	-	570	-	ENSCCAP00000005698	189 (aa)	-	A0A2K5PPX2

Gene Model

Click here to download ENSCCAG00000020578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCCAG00000020578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCCAG00000020578	-	93	85.714	ENSCCAG00000030237	-	100	74.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCCAG00000020578	-	100	98.864	ENSG00000183684	ALYREF	100	98.864	Homo_sapiens
ENSCCAG00000020578	-	97	68.345	ENSAPOG00000018455	ALYREF	100	72.662	Acanthochromis_polyacanthus
ENSCCAG00000020578	-	78	86.190	ENSAMEG00000017463	ALYREF	74	91.848	Ailuropoda_melanoleuca
ENSCCAG00000020578	-	97	75.573	ENSACAG00000010526	ALYREF	100	75.573	Anolis_carolinensis
ENSCCAG00000020578	-	67	97.740	ENSANAG00000022638	-	87	89.268	Aotus_nancymaae
ENSCCAG00000020578	-	100	82.955	ENSANAG00000028229	-	80	85.606	Aotus_nancymaae
ENSCCAG00000020578	-	97	97.665	ENSBTAG00000008498	ALYREF	100	97.665	Bos_taurus
ENSCCAG00000020578	-	100	98.942	ENSCJAG00000039942	ALYREF	100	98.942	Callithrix_jacchus
ENSCCAG00000020578	-	97	96.887	ENSCAFG00000005877	ALYREF	100	96.887	Canis_familiaris
ENSCCAG00000020578	-	97	96.887	ENSCAFG00020009815	ALYREF	100	96.887	Canis_lupus_dingo
ENSCCAG00000020578	-	97	96.899	ENSCHIG00000017396	ALYREF	97	96.899	Capra_hircus
ENSCCAG00000020578	-	85	83.406	ENSTSYG00000002272	ALYREF	74	92.632	Carlito_syrichta
ENSCCAG00000020578	-	51	96.269	ENSCAPG00000014727	-	100	96.269	Cavia_aperea
ENSCCAG00000020578	-	97	96.498	ENSCPOG00000013710	ALYREF	100	96.498	Cavia_porcellus
ENSCCAG00000020578	-	100	98.864	ENSCATG00000033169	ALYREF	100	98.864	Cercocebus_atys
ENSCCAG00000020578	-	97	88.327	ENSCLAG00000015026	ALYREF	100	88.327	Chinchilla_lanigera
ENSCCAG00000020578	-	100	98.864	ENSCSAG00000002216	ALYREF	100	98.864	Chlorocebus_sabaeus
ENSCCAG00000020578	-	69	96.685	ENSCANG00000034056	ALYREF	95	86.631	Colobus_angolensis_palliatus
ENSCCAG00000020578	-	97	94.163	ENSCGRG00001018191	-	100	93.385	Cricetulus_griseus_chok1gshd
ENSCCAG00000020578	-	72	91.579	ENSCGRG00000015871	-	98	82.266	Cricetulus_griseus_crigri
ENSCCAG00000020578	-	100	52.284	ENSCSEG00000015438	-	98	56.281	Cynoglossus_semilaevis
ENSCCAG00000020578	-	67	96.067	ENSDNOG00000002563	ALYREF	95	82.222	Dasypus_novemcinctus
ENSCCAG00000020578	-	68	97.207	ENSDORG00000025849	-	73	96.667	Dipodomys_ordii
ENSCCAG00000020578	-	67	93.820	ENSETEG00000016596	ALYREF	100	93.258	Echinops_telfairi
ENSCCAG00000020578	-	100	96.591	ENSEASG00005005824	ALYREF	98	96.591	Equus_asinus_asinus
ENSCCAG00000020578	-	100	96.591	ENSECAG00000018754	ALYREF	98	96.591	Equus_caballus
ENSCCAG00000020578	-	91	97.674	ENSEEUG00000010164	ALYREF	100	97.674	Erinaceus_europaeus
ENSCCAG00000020578	-	99	97.328	ENSFCAG00000022549	ALYREF	99	97.328	Felis_catus
ENSCCAG00000020578	-	78	87.317	ENSFDAG00000001213	ALYREF	93	86.893	Fukomys_damarensis
ENSCCAG00000020578	-	97	84.170	ENSGALG00000007237	ALYREF	100	85.328	Gallus_gallus
ENSCCAG00000020578	-	97	70.566	ENSGACG00000013328	ALYREF	100	73.308	Gasterosteus_aculeatus
ENSCCAG00000020578	-	97	83.206	ENSGAGG00000008536	ALYREF	100	84.351	Gopherus_agassizii
ENSCCAG00000020578	-	100	99.242	ENSGGOG00000013935	ALYREF	100	99.242	Gorilla_gorilla
ENSCCAG00000020578	-	100	97.354	ENSHGLG00000008293	ALYREF	100	97.354	Heterocephalus_glaber_female
ENSCCAG00000020578	-	78	80.444	ENSHGLG00100006949	ALYREF	95	81.166	Heterocephalus_glaber_male
ENSCCAG00000020578	-	97	68.165	ENSHCOG00000015046	ALYREF	100	69.853	Hippocampus_comes
ENSCCAG00000020578	-	97	93.385	ENSJJAG00000004134	-	100	93.385	Jaculus_jaculus
ENSCCAG00000020578	-	97	70.833	ENSLACG00000005694	ALYREF	100	72.727	Latimeria_chalumnae
ENSCCAG00000020578	-	71	94.681	ENSLAFG00000003083	ALYREF	100	93.617	Loxodonta_africana
ENSCCAG00000020578	-	100	96.212	ENSMFAG00000001394	ALYREF	100	96.212	Macaca_fascicularis
ENSCCAG00000020578	-	100	98.864	ENSMMUG00000012884	ALYREF	100	98.864	Macaca_mulatta
ENSCCAG00000020578	-	100	98.864	ENSMNEG00000043666	ALYREF	100	98.864	Macaca_nemestrina
ENSCCAG00000020578	-	70	88.421	ENSMLEG00000043353	ALYREF	87	86.316	Mandrillus_leucophaeus
ENSCCAG00000020578	-	97	78.988	ENSMAUG00000020552	-	100	77.043	Mesocricetus_auratus
ENSCCAG00000020578	-	100	97.884	ENSMICG00000017403	ALYREF	100	97.884	Microcebus_murinus
ENSCCAG00000020578	-	97	82.576	ENSMOCG00000016792	-	100	81.818	Microtus_ochrogaster
ENSCCAG00000020578	-	97	93.385	ENSMODG00000003030	ALYREF	84	92.996	Monodelphis_domestica
ENSCCAG00000020578	-	97	69.455	ENSMALG00000019408	ALYREF	100	73.091	Monopterus_albus
ENSCCAG00000020578	-	97	73.930	MGP_CAROLIEiJ_G0014874	Alyref2	100	71.984	Mus_caroli
ENSCCAG00000020578	-	97	96.109	MGP_CAROLIEiJ_G0017529	Alyref	100	96.109	Mus_caroli
ENSCCAG00000020578	-	98	61.034	ENSMUSG00000090854	Gm4340	100	53.819	Mus_musculus
ENSCCAG00000020578	-	91	65.698	ENSMUSG00000112931	Gm4303	63	66.176	Mus_musculus
ENSCCAG00000020578	-	97	62.105	ENSMUSG00000091779	Gm21293	100	54.930	Mus_musculus
ENSCCAG00000020578	-	91	64.535	ENSMUSG00000096640	Gm4312	63	64.706	Mus_musculus
ENSCCAG00000020578	-	91	65.698	ENSMUSG00000096744	Gm4307	63	66.176	Mus_musculus
ENSCCAG00000020578	-	97	61.654	ENSMUSG00000086727	4931428L18Rik	100	56.061	Mus_musculus
ENSCCAG00000020578	-	91	65.698	ENSMUSG00000112856	Gm4305	63	66.176	Mus_musculus
ENSCCAG00000020578	-	98	61.888	ENSMUSG00000094144	Gm21312	100	54.930	Mus_musculus
ENSCCAG00000020578	-	91	65.698	ENSMUSG00000091101	Gm4302	62	66.176	Mus_musculus
ENSCCAG00000020578	-	91	64.535	ENSMUSG00000094314	Gm4301	63	64.706	Mus_musculus
ENSCCAG00000020578	-	98	61.888	ENSMUSG00000097427	Gm6763	99	62.275	Mus_musculus
ENSCCAG00000020578	-	97	74.031	ENSMUSG00000060244	Alyref2	100	73.643	Mus_musculus
ENSCCAG00000020578	-	97	61.278	ENSMUSG00000117091	AC153137.1	100	58.712	Mus_musculus
ENSCCAG00000020578	-	97	96.109	ENSMUSG00000025134	Alyref	100	96.109	Mus_musculus
ENSCCAG00000020578	-	98	61.888	ENSMUSG00000097878	Gm8764	99	62.275	Mus_musculus
ENSCCAG00000020578	-	98	61.888	ENSMUSG00000095022	Gm20765	100	54.930	Mus_musculus
ENSCCAG00000020578	-	97	62.105	ENSMUSG00000097550	Gm21304	100	54.930	Mus_musculus
ENSCCAG00000020578	-	91	64.535	MGP_PahariEiJ_G0027254	-	84	67.633	Mus_pahari
ENSCCAG00000020578	-	91	64.535	MGP_PahariEiJ_G0027255	-	82	67.633	Mus_pahari
ENSCCAG00000020578	-	95	92.737	MGP_PahariEiJ_G0018656	-	99	97.354	Mus_pahari
ENSCCAG00000020578	-	97	96.109	MGP_PahariEiJ_G0018655	-	100	96.109	Mus_pahari
ENSCCAG00000020578	-	97	96.109	MGP_SPRETEiJ_G0018373	Alyref	100	96.109	Mus_spretus
ENSCCAG00000020578	-	55	72.115	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSCCAG00000020578	-	97	73.643	MGP_SPRETEiJ_G0015679	Alyref2	100	73.256	Mus_spretus
ENSCCAG00000020578	-	97	59.239	ENSMLUG00000022869	-	71	63.768	Myotis_lucifugus
ENSCCAG00000020578	-	97	62.842	ENSMLUG00000025677	-	77	61.961	Myotis_lucifugus
ENSCCAG00000020578	-	80	82.710	ENSMLUG00000009555	-	68	89.894	Myotis_lucifugus
ENSCCAG00000020578	-	95	62.302	ENSMLUG00000024976	-	79	60.870	Myotis_lucifugus
ENSCCAG00000020578	-	95	69.841	ENSMLUG00000027516	-	78	67.460	Myotis_lucifugus
ENSCCAG00000020578	-	95	61.111	ENSMLUG00000024447	-	76	61.508	Myotis_lucifugus
ENSCCAG00000020578	-	90	62.791	ENSMLUG00000023213	-	100	49.811	Myotis_lucifugus
ENSCCAG00000020578	-	95	62.698	ENSMLUG00000027352	-	77	61.905	Myotis_lucifugus
ENSCCAG00000020578	-	97	57.065	ENSMLUG00000024471	-	82	53.640	Myotis_lucifugus
ENSCCAG00000020578	-	97	65.405	ENSMLUG00000002626	-	98	64.729	Myotis_lucifugus
ENSCCAG00000020578	-	97	55.978	ENSMLUG00000015043	-	98	53.282	Myotis_lucifugus
ENSCCAG00000020578	-	97	61.749	ENSMLUG00000026271	-	79	63.347	Myotis_lucifugus
ENSCCAG00000020578	-	97	61.749	ENSMLUG00000030407	-	77	60.784	Myotis_lucifugus
ENSCCAG00000020578	-	82	60.274	ENSMLUG00000028343	-	91	62.121	Myotis_lucifugus
ENSCCAG00000020578	-	100	99.242	ENSNLEG00000010313	ALYREF	100	99.242	Nomascus_leucogenys
ENSCCAG00000020578	-	80	73.810	ENSMEUG00000002210	ALYREF	91	73.684	Notamacropus_eugenii
ENSCCAG00000020578	-	51	91.791	ENSOPRG00000005551	-	52	90.299	Ochotona_princeps
ENSCCAG00000020578	-	97	95.769	ENSODEG00000008359	ALYREF	100	95.769	Octodon_degus
ENSCCAG00000020578	-	97	69.091	ENSORLG00000012331	ALYREF	100	72.000	Oryzias_latipes
ENSCCAG00000020578	-	75	89.899	ENSOGAG00000012409	ALYREF	84	88.889	Otolemur_garnettii
ENSCCAG00000020578	-	67	97.753	ENSOARG00000017932	ALYREF	67	97.753	Ovis_aries
ENSCCAG00000020578	-	99	97.328	ENSPPRG00000010829	ALYREF	99	97.328	Panthera_pardus
ENSCCAG00000020578	-	55	97.931	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSCCAG00000020578	-	100	99.242	ENSPTRG00000009774	ALYREF	100	99.242	Pan_troglodytes
ENSCCAG00000020578	-	100	98.864	ENSPANG00000019265	ALYREF	100	98.864	Papio_anubis
ENSCCAG00000020578	-	50	92.481	ENSPSIG00000017541	ALYREF	98	93.233	Pelodiscus_sinensis
ENSCCAG00000020578	-	100	99.621	ENSPPYG00000008749	ALYREF	100	99.621	Pongo_abelii
ENSCCAG00000020578	-	100	97.884	ENSPCOG00000020874	ALYREF	100	97.884	Propithecus_coquereli
ENSCCAG00000020578	-	97	78.988	ENSPVAG00000017866	ALYREF	100	78.988	Pteropus_vampyrus
ENSCCAG00000020578	-	100	96.825	ENSRNOG00000036687	Alyref	100	96.825	Rattus_norvegicus
ENSCCAG00000020578	-	69	96.685	ENSRBIG00000039651	ALYREF	74	96.685	Rhinopithecus_bieti
ENSCCAG00000020578	-	88	91.379	ENSRROG00000045364	ALYREF	82	97.619	Rhinopithecus_roxellana
ENSCCAG00000020578	-	73	92.228	ENSSHAG00000010459	ALYREF	100	92.228	Sarcophilus_harrisii
ENSCCAG00000020578	-	97	52.158	ENSSDUG00000003992	-	100	51.027	Seriola_dumerili
ENSCCAG00000020578	-	97	53.091	ENSSLDG00000005386	-	100	51.557	Seriola_lalandi_dorsalis
ENSCCAG00000020578	-	97	82.443	ENSSPUG00000004600	ALYREF	100	82.443	Sphenodon_punctatus
ENSCCAG00000020578	-	97	68.459	ENSSPAG00000011178	ALYREF	97	70.609	Stegastes_partitus
ENSCCAG00000020578	-	97	97.276	ENSSSCG00000032655	ALYREF	100	97.276	Sus_scrofa
ENSCCAG00000020578	-	50	93.939	ENSTGUG00000003513	ALYREF	100	91.852	Taeniopygia_guttata
ENSCCAG00000020578	-	97	69.485	ENSTRUG00000008828	ALYREF	100	69.004	Takifugu_rubripes
ENSCCAG00000020578	-	67	96.067	ENSTBEG00000005834	ALYREF	100	96.067	Tupaia_belangeri
ENSCCAG00000020578	-	97	95.720	ENSTTRG00000012275	ALYREF	100	95.720	Tursiops_truncatus
ENSCCAG00000020578	-	67	83.051	ENSUAMG00000016931	ALYREF	66	81.356	Ursus_americanus
ENSCCAG00000020578	-	67	83.051	ENSUMAG00000016384	ALYREF	65	81.356	Ursus_maritimus
ENSCCAG00000020578	-	97	75.581	ENSXETG00000005391	alyref	100	73.585	Xenopus_tropicalis